Detailed information NTG0070325

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: VCASEI_RS09695
• Genome accession: NZ_AP018680
• Coordinates: 2055474..2056514 (-)
• Length: 346 a.a.
• NCBI ID: WP_086959518.1
• Uniprot ID: -
• Organism: Vibrio casei strain DSM 22364
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2050474..2061514

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VCASEI_RS09680	csrA	2051543..2051740 (-)	198	WP_086959522.1	carbon storage regulator CsrA	-
VCASEI_RS09685	alaS	2052179..2054773 (-)	2595	WP_086959520.1	alanine--tRNA ligase	-
VCASEI_RS09690	recX	2054878..2055342 (-)	465	WP_086959538.1	recombination regulator RecX	-
VCASEI_RS09695	recA	2055474..2056514 (-)	1041	WP_086959518.1	recombinase RecA	Machinery gene
VCASEI_RS09700	pncC	2056628..2057119 (-)	492	WP_086959536.1	nicotinamide-nucleotide amidase	-
VCASEI_RS09705	-	2057359..2058291 (+)	933	WP_086959516.1	TAXI family TRAP transporter solute-binding subunit	-
VCASEI_RS09710	-	2058377..2060266 (+)	1890	WP_089111245.1	TRAP transporter fused permease subunit	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37226.82 Da
• Isoelectric Point: 5.0547

>NTDB_id=70325 VCASEI_RS09695 WP_086959518.1 2055474..2056514(-) (recA) [Vibrio casei strain DSM 22364]
MDENKQKALAAALGQIEKQFGKGSIMKLGDNRTMDVETISTGSLALDIALGAGGLPMGRIVEVYGPESSGKTTLTLELIA
AAQRVGKTCAFIDAEHALDPIYAQKLGVNINDLLVSQPDTGEQALEICDALARSGAIDVLVIDSVAALTPKAEIEGEMGD
SHMGLQARMLSQAMRKLTGNLKQSNCMAIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAIKDGDEVVGNE
TRIKVVKNKIAAPFKQAETQILYGKGFNREGELIDLGVKNKLVEKAGAWYSYQGDKIGQGKANSCNYLREHPAIALEIDT
KLREMLLSPVVIEEEKVVEAEAGEEL

Nucleotide

• Length: 1041 bp

>NTDB_id=70325 VCASEI_RS09695 WP_086959518.1 2055474..2056514(-) (recA) [Vibrio casei strain DSM 22364]
ATGGACGAGAACAAACAAAAGGCTCTAGCGGCGGCACTTGGCCAAATCGAAAAACAATTTGGTAAAGGCTCAATCATGAA
ATTGGGTGATAACCGCACTATGGATGTAGAAACTATTTCTACAGGCTCTCTTGCTTTGGATATCGCATTGGGTGCGGGTG
GTTTGCCTATGGGACGTATCGTTGAAGTGTACGGACCTGAAAGTTCAGGCAAAACAACACTAACATTAGAATTGATCGCA
GCTGCACAACGTGTTGGTAAAACCTGTGCTTTTATTGATGCAGAGCATGCGCTAGACCCTATCTACGCTCAGAAACTTGG
CGTAAACATTAATGATCTTCTTGTTTCTCAGCCGGATACCGGTGAGCAAGCGCTTGAAATTTGTGATGCACTGGCACGTT
CAGGGGCTATTGATGTTTTGGTTATTGACTCAGTGGCGGCATTGACACCGAAAGCTGAAATTGAAGGTGAAATGGGTGAC
AGTCACATGGGGCTTCAAGCTCGTATGCTTTCTCAAGCCATGCGTAAATTAACGGGTAATCTAAAACAGTCTAACTGTAT
GGCAATCTTCATTAACCAAATTCGTATGAAAATTGGTGTTATGTTTGGTTCGCCAGAAACCACGACAGGTGGTAATGCAC
TTAAATTCTACGCCTCTGTTCGTTTAGACATTCGCCGTACTGGTGCCATTAAAGATGGTGATGAAGTCGTCGGTAACGAA
ACACGTATTAAAGTGGTTAAGAACAAGATAGCTGCGCCATTTAAACAAGCTGAAACTCAAATTCTTTATGGTAAAGGCTT
TAACCGTGAAGGTGAGCTGATTGACTTAGGTGTTAAAAATAAGCTTGTTGAAAAAGCAGGCGCTTGGTACAGCTACCAAG
GTGATAAAATTGGTCAAGGTAAAGCAAATTCTTGTAATTATCTGCGTGAACACCCAGCTATTGCTCTAGAGATTGACACT
AAATTACGTGAAATGCTTCTATCTCCAGTGGTTATTGAAGAAGAAAAAGTGGTCGAAGCTGAAGCTGGTGAAGAGCTTTA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Vibrio cholerae strain A1552	89.362	95.087	0.85
recA	Vibrio cholerae O1 biovar El Tor strain E7946	89.362	95.087	0.85
recA	Acinetobacter baumannii D1279779	72.434	98.555	0.714
recA	Pseudomonas stutzeri DSM 10701	75.535	94.509	0.714
recA	Acinetobacter baylyi ADP1	73.78	94.798	0.699
recA	Glaesserella parasuis strain SC1401	69.325	94.22	0.653
recA	Neisseria gonorrhoeae MS11	69.325	94.22	0.653
recA	Neisseria gonorrhoeae MS11	69.325	94.22	0.653
recA	Neisseria gonorrhoeae strain FA1090	69.325	94.22	0.653
recA	Ralstonia pseudosolanacearum GMI1000	72.026	89.884	0.647
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	92.775	0.59
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.323	92.197	0.584
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.423	95.665	0.578
recA	Helicobacter pylori strain NCTC11637	61.162	94.509	0.578
recA	Helicobacter pylori 26695	60.856	94.509	0.575
recA	Streptococcus pneumoniae R6	60.991	93.353	0.569
recA	Streptococcus pneumoniae TIGR4	60.991	93.353	0.569
recA	Streptococcus pneumoniae Rx1	60.991	93.353	0.569
recA	Streptococcus pneumoniae D39	60.991	93.353	0.569
recA	Streptococcus mutans UA159	56.772	100	0.569
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.271	95.087	0.564
recA	Streptococcus pyogenes NZ131	60	93.931	0.564
recA	Streptococcus mitis NCTC 12261	60.062	93.353	0.561
recA	Latilactobacillus sakei subsp. sakei 23K	60.436	92.775	0.561
recA	Streptococcus mitis SK321	59.752	93.353	0.558
recA	Lactococcus lactis subsp. cremoris KW2	59.752	93.353	0.558