Detailed information NTG0069601

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: UNDKW_RS03105
• Genome accession: NZ_AP018439
• Coordinates: 678850..679890 (+)
• Length: 346 a.a.
• NCBI ID: WP_162039694.1
• Uniprot ID: A0A809QCZ9
• Organism: Undibacterium sp. KW1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 673850..684890

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
UNDKW_RS03095 (UNDKW_0619)	-	675647..677689 (+)	2043	WP_162057531.1	hypothetical protein	-
UNDKW_RS03100 (UNDKW_0620)	-	678286..678522 (+)	237	WP_370529074.1	helix-turn-helix domain-containing protein	-
UNDKW_RS03105 (UNDKW_0621)	recA	678850..679890 (+)	1041	WP_162039694.1	recombinase RecA	Machinery gene
UNDKW_RS03110 (UNDKW_0622)	recX	680007..680465 (+)	459	WP_162057532.1	recombination regulator RecX	-
UNDKW_RS03115 (UNDKW_0623)	-	681265..681849 (+)	585	WP_162057533.1	DUF2889 domain-containing protein	-
UNDKW_RS03120 (UNDKW_0624)	sucC	681881..683065 (+)	1185	WP_255431543.1	ADP-forming succinate--CoA ligase subunit beta	-
UNDKW_RS03125 (UNDKW_0625)	sucD	683084..683965 (+)	882	WP_110255493.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 37006.28 Da
• Isoelectric Point: 5.0621

>NTDB_id=69601 UNDKW_RS03105 WP_162039694.1 678850..679890(+) (recA) [Undibacterium sp. KW1]
MDDKKPENASEKAKALAAALAQIEKQFGKGSVMRMADGEVVEEVQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKT
TLTLQAIAEMQKLGGTCAFIDAEHALDVGYAQKLGVNLSDLLISQPDTGEQALEITDALVRSGSVDLVVIDSVAALTPRA
EIEGDMGDSLPGLQARLMSQALRKLTGSIKRTNTLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGSIKS
GDEVVGNETKVKVVKNKVAPPFKEAHFDIMYGEGTSREGEILDLAADAKIIEKAGAWYSYNGERIGQGKDNARTYLKERP
ELSFEIENKVREHLGVPLLSAVATAE

Nucleotide

• Length: 1041 bp

>NTDB_id=69601 UNDKW_RS03105 WP_162039694.1 678850..679890(+) (recA) [Undibacterium sp. KW1]
ATGGACGATAAGAAACCAGAAAATGCCTCAGAAAAAGCAAAGGCACTTGCAGCAGCGCTGGCACAGATAGAAAAGCAATT
TGGTAAAGGTTCGGTCATGCGTATGGCCGACGGTGAAGTGGTGGAAGAGGTGCAGGTTGTTTCTACTGGTTCTCTGGGCC
TGGATATCGCGCTCGGCGTTGGTGGCTTGCCACGTGGCCGTGTCGTTGAGATTTATGGCCCTGAATCTTCTGGTAAAACC
ACATTGACGCTGCAAGCGATTGCTGAAATGCAAAAGCTGGGTGGTACTTGTGCGTTTATCGATGCTGAGCATGCTTTGGA
CGTTGGTTACGCTCAAAAACTGGGTGTGAATCTGTCTGATTTGCTGATTTCCCAGCCTGATACCGGCGAGCAAGCGCTGG
AAATTACTGATGCGCTGGTGCGTTCTGGTAGTGTCGATCTGGTGGTTATTGACTCAGTTGCGGCCCTGACGCCACGTGCA
GAGATTGAAGGCGACATGGGTGATTCTTTGCCTGGTTTGCAAGCGCGTCTGATGTCTCAGGCTTTGCGTAAGCTGACTGG
CAGTATCAAGCGTACCAATACTCTGGTAATCTTTATTAACCAGATCCGTATGAAGATTGGTGTCATGTTTGGTAGCCCAG
AAACGACAACTGGCGGTAATGCGCTGAAGTTTTATGCTTCCGTACGTCTGGATATCCGCCGCACTGGCTCTATCAAGTCT
GGTGATGAAGTGGTGGGGAATGAAACCAAGGTCAAGGTAGTCAAGAATAAGGTGGCACCACCATTCAAGGAAGCGCACTT
TGACATCATGTATGGCGAAGGTACTTCCCGCGAAGGCGAGATTCTGGATCTGGCAGCCGATGCCAAGATCATAGAAAAAG
CTGGTGCCTGGTATAGCTATAACGGTGAGCGTATCGGCCAGGGTAAGGACAATGCACGTACTTATTTGAAAGAACGTCCT
GAGCTGTCGTTTGAAATTGAAAACAAGGTGCGAGAACATCTGGGCGTGCCTTTGTTGTCAGCAGTAGCGACTGCTGAGTA
A

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (14-275)

3D structure

• AlphaFold DB: A0A809QCZ9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	84.259	93.642	0.789
recA	Neisseria gonorrhoeae strain FA1090	72.727	95.376	0.694
recA	Neisseria gonorrhoeae MS11	72.727	95.376	0.694
recA	Neisseria gonorrhoeae MS11	72.727	95.376	0.694
recA	Acinetobacter baylyi ADP1	71.257	96.532	0.688
recA	Pseudomonas stutzeri DSM 10701	70.871	96.243	0.682
recA	Acinetobacter baumannii D1279779	72.446	93.353	0.676
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.472	94.22	0.673
recA	Vibrio cholerae strain A1552	71.472	94.22	0.673
recA	Glaesserella parasuis strain SC1401	71.605	93.642	0.671
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	68.389	95.087	0.65
recA	Streptococcus mitis NCTC 12261	63.343	98.555	0.624
recA	Streptococcus mitis SK321	63.343	98.555	0.624
recA	Streptococcus pneumoniae R6	65.06	95.954	0.624
recA	Streptococcus pneumoniae D39	65.06	95.954	0.624
recA	Streptococcus pneumoniae Rx1	65.06	95.954	0.624
recA	Streptococcus pneumoniae TIGR4	65.06	95.954	0.624
recA	Streptococcus pyogenes NZ131	65.152	95.376	0.621
recA	Lactococcus lactis subsp. cremoris KW2	61.095	100	0.613
recA	Streptococcus mutans UA159	64.048	95.665	0.613
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	64.724	94.22	0.61
recA	Bacillus subtilis subsp. subtilis str. 168	64.526	94.509	0.61
recA	Latilactobacillus sakei subsp. sakei 23K	64.22	94.509	0.607
recA	Helicobacter pylori 26695	64.11	94.22	0.604
recA	Helicobacter pylori strain NCTC11637	63.804	94.22	0.601
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.804	94.22	0.601