Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EP180_RS04300 | Genome accession | NZ_AP018385 |
| Coordinates | 738012..739058 (+) | Length | 348 a.a. |
| NCBI ID | WP_003688695.1 | Uniprot ID | Q5F8M9 |
| Organism | Neisseria gonorrhoeae strain FC498 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 730927..805974 | 738012..739058 | within | 0 |
Gene organization within MGE regions
Location: 730927..805974
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EP180_RS04260 (NgFC498_00745) | - | 730927..731997 (-) | 1071 | WP_010360162.1 | tyrosine-type recombinase/integrase | - |
| EP180_RS04265 (NgFC498_00746) | - | 732206..732985 (-) | 780 | WP_003688701.1 | ferredoxin--NADP reductase | - |
| EP180_RS04280 | - | 733577..733786 (-) | 210 | WP_003688699.1 | hypothetical protein | - |
| EP180_RS04285 (NgFC498_00748) | dinB | 733885..734943 (+) | 1059 | WP_003695315.1 | DNA polymerase IV | - |
| EP180_RS04290 (NgFC498_00749) | rep | 735013..737028 (-) | 2016 | WP_012503651.1 | DNA helicase Rep | - |
| EP180_RS04295 (NgFC498_00750) | aroD | 737048..737812 (-) | 765 | WP_003688696.1 | type I 3-dehydroquinate dehydratase | - |
| EP180_RS04300 (NgFC498_00751) | recA | 738012..739058 (+) | 1047 | WP_003688695.1 | recombinase RecA | Machinery gene |
| EP180_RS04315 (NgFC498_00752) | - | 739711..740046 (-) | 336 | WP_003688693.1 | YbaB/EbfC family nucleoid-associated protein | - |
| EP180_RS04320 (NgFC498_00753) | dnaX | 740127..742250 (-) | 2124 | WP_003695312.1 | DNA polymerase III subunit gamma/tau | - |
| EP180_RS04325 (NgFC498_00754) | mutL | 742345..744309 (-) | 1965 | WP_047926984.1 | DNA mismatch repair endonuclease MutL | - |
| EP180_RS04330 (NgFC498_00755) | - | 744453..744638 (+) | 186 | WP_003688687.1 | DUF3460 family protein | - |
| EP180_RS04335 (NgFC498_00756) | - | 744649..745317 (+) | 669 | WP_003688686.1 | class I SAM-dependent methyltransferase | - |
| EP180_RS04340 (NgFC498_00757) | - | 745317..746030 (+) | 714 | WP_003697104.1 | tetratricopeptide repeat protein | - |
| EP180_RS04345 (NgFC498_00758) | purE | 746078..746563 (+) | 486 | WP_003688684.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| EP180_RS04355 (NgFC498_00759) | - | 746775..747582 (-) | 808 | Protein_754 | transposase | - |
| EP180_RS04365 | - | 747956..748321 (+) | 366 | Protein_755 | transposase | - |
| EP180_RS04370 (NgFC498_00761) | - | 748328..749353 (+) | 1026 | Protein_756 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| EP180_RS04375 (NgFC498_00762) | - | 749548..750204 (-) | 657 | WP_003688682.1 | response regulator | - |
| EP180_RS04380 (NgFC498_00763) | - | 750201..751970 (-) | 1770 | WP_003688681.1 | histidine kinase | - |
| EP180_RS04385 (NgFC498_00764) | - | 752177..752791 (+) | 615 | WP_047917856.1 | molybdenum cofactor guanylyltransferase | - |
| EP180_RS04390 (NgFC498_00765) | - | 752954..753571 (+) | 618 | WP_010358100.1 | riboflavin synthase | - |
| EP180_RS04395 | - | 753579..754443 (+) | 865 | Protein_761 | ATP-binding protein | - |
| EP180_RS04400 (NgFC498_00768) | - | 754456..754890 (-) | 435 | WP_003688677.1 | Spy/CpxP family protein refolding chaperone | - |
| EP180_RS04405 (NgFC498_00769) | rpe | 755036..755719 (+) | 684 | WP_003688675.1 | ribulose-phosphate 3-epimerase | - |
| EP180_RS04415 (NgFC498_00770) | ruvB | 755964..756995 (-) | 1032 | WP_003688673.1 | Holliday junction branch migration DNA helicase RuvB | - |
| EP180_RS04420 (NgFC498_00771) | - | 757077..757385 (-) | 309 | WP_003688671.1 | hypothetical protein | - |
| EP180_RS04430 (NgFC498_00772) | - | 757804..759036 (-) | 1233 | WP_003702731.1 | multifunctional CCA addition/repair protein | - |
| EP180_RS04435 (NgFC498_00773) | - | 759115..760743 (-) | 1629 | WP_010951119.1 | ABC-F family ATPase | - |
| EP180_RS04440 (NgFC498_00774) | - | 760893..761267 (+) | 375 | WP_003688664.1 | arsenate reductase | - |
| EP180_RS04445 (NgFC498_00775) | - | 761316..762854 (+) | 1539 | WP_003695299.1 | SurA N-terminal domain-containing protein | - |
| EP180_RS04450 (NgFC498_00776) | recR | 762921..763538 (+) | 618 | WP_003688660.1 | recombination mediator RecR | - |
| EP180_RS04455 (NgFC498_00777) | - | 763594..763872 (-) | 279 | WP_003688659.1 | hypothetical protein | - |
| EP180_RS04470 (NgFC498_00778) | - | 764098..765345 (+) | 1248 | WP_003691197.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| EP180_RS04475 (NgFC498_00779) | lolD | 765338..766033 (+) | 696 | WP_003688655.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| EP180_RS04480 (NgFC498_00780) | recD | 766100..767845 (+) | 1746 | WP_003688652.1 | exodeoxyribonuclease V subunit alpha | Machinery gene |
| EP180_RS04485 | - | 767917..768563 (-) | 647 | Protein_775 | methyltransferase | - |
| EP180_RS04490 (NgFC498_00782) | - | 768571..769533 (+) | 963 | WP_127466217.1 | IS110 family transposase | - |
| EP180_RS13575 | - | 769662..770121 (-) | 460 | Protein_777 | methyltransferase | - |
| EP180_RS04500 (NgFC498_00784) | lon | 770373..772835 (+) | 2463 | WP_003688644.1 | endopeptidase La | - |
| EP180_RS04505 (NgFC498_00785) | - | 773017..773286 (+) | 270 | WP_003688640.1 | HU family DNA-binding protein | - |
| EP180_RS04510 (NgFC498_00786) | - | 773462..773896 (-) | 435 | WP_003688638.1 | hypothetical protein | - |
| EP180_RS04515 (NgFC498_00787) | - | 773889..775196 (-) | 1308 | WP_103195193.1 | homoserine dehydrogenase | - |
| EP180_RS04520 (NgFC498_00788) | - | 775392..775763 (+) | 372 | WP_003688636.1 | Mth938-like domain-containing protein | - |
| EP180_RS04525 (NgFC498_00789) | - | 775840..777762 (+) | 1923 | WP_003691184.1 | ATP-binding cassette domain-containing protein | - |
| EP180_RS04530 | - | 777725..778144 (+) | 420 | WP_229692939.1 | DUF4124 domain-containing protein | - |
| EP180_RS04535 (NgFC498_00790) | - | 778235..778747 (+) | 513 | WP_003693093.1 | hypothetical protein | - |
| EP180_RS04540 (NgFC498_00791) | - | 779177..779872 (-) | 696 | WP_033910499.1 | DUF4400 domain-containing protein | - |
| EP180_RS04545 (NgFC498_00792) | traD | 779862..781904 (-) | 2043 | WP_012503640.1 | type IV conjugative transfer system coupling protein TraD | - |
| EP180_RS04550 (NgFC498_00793) | mobH | 781901..784453 (-) | 2553 | WP_012503639.1 | MobH family relaxase | - |
| EP180_RS04555 (NgFC498_00794) | - | 784450..784869 (-) | 420 | WP_003693104.1 | hypothetical protein | - |
| EP180_RS04560 (NgFC498_00795) | - | 785380..785841 (+) | 462 | WP_012503638.1 | lytic transglycosylase domain-containing protein | - |
| EP180_RS04565 (NgFC498_00796) | - | 785811..786332 (+) | 522 | WP_003695285.1 | OmpA family protein | - |
| EP180_RS04570 (NgFC498_00797) | traA | 786388..786684 (+) | 297 | WP_003697092.1 | TraA family conjugative transfer protein | - |
| EP180_RS04575 (NgFC498_00798) | traL | 786706..786987 (+) | 282 | WP_003693110.1 | type IV conjugative transfer system protein TraL | - |
| EP180_RS04580 (NgFC498_00799) | - | 786984..787649 (+) | 666 | WP_003704028.1 | conjugal transfer protein TraE | - |
| EP180_RS04585 (NgFC498_00800) | - | 787651..788385 (+) | 735 | WP_003693114.1 | TraK domain-containing protein | - |
| EP180_RS04590 (NgFC498_00801) | - | 788387..789700 (+) | 1314 | WP_003697090.1 | TrbI/VirB10 family protein | - |
| EP180_RS04595 (NgFC498_00802) | - | 789710..790429 (+) | 720 | WP_003693119.1 | DsbC family protein | - |
| EP180_RS04600 (NgFC498_00803) | - | 790426..791007 (+) | 582 | WP_017146802.1 | TraV family lipoprotein | - |
| EP180_RS04605 (NgFC498_00804) | traC | 791017..793593 (+) | 2577 | WP_003693122.1 | type IV secretion system protein TraC | - |
| EP180_RS04610 (NgFC498_00805) | - | 793621..794169 (+) | 549 | WP_003695274.1 | hypothetical protein | - |
| EP180_RS04615 (NgFC498_00806) | - | 794169..794714 (+) | 546 | WP_003704029.1 | S26 family signal peptidase | - |
| EP180_RS04620 (NgFC498_00807) | - | 794723..795379 (+) | 657 | WP_003693128.1 | hypothetical protein | - |
| EP180_RS04625 (NgFC498_00808) | - | 795376..796494 (+) | 1119 | WP_003695266.1 | TraU family protein | - |
| EP180_RS04630 (NgFC498_00809) | trbC | 796509..797261 (+) | 753 | WP_003699946.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EP180_RS04635 (NgFC498_00810) | - | 797258..798502 (+) | 1245 | WP_003695263.1 | hypothetical protein | - |
| EP180_RS04640 (NgFC498_00811) | traN | 798541..800082 (+) | 1542 | WP_226876101.1 | conjugal transfer protein TraN | - |
| EP180_RS04645 (NgFC498_00812) | - | 800069..800494 (+) | 426 | WP_003693140.1 | hypothetical protein | - |
| EP180_RS04650 (NgFC498_00813) | - | 800506..801282 (+) | 777 | WP_012503632.1 | thioredoxin family protein | - |
| EP180_RS04655 (NgFC498_00814) | - | 801454..802965 (+) | 1512 | WP_041421275.1 | conjugal transfer protein TraH | - |
| EP180_RS04660 (NgFC498_00815) | - | 802972..805974 (+) | 3003 | WP_012503630.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 37642.87 Da Isoelectric Point: 4.8330
>NTDB_id=69266 EP180_RS04300 WP_003688695.1 738012..739058(+) (recA) [Neisseria gonorrhoeae strain FC498]
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAV
AQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGN
ETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEID
AKIRALNGVEMHITEGTQDETDGERPEE
MSDDKSKALAAALAQIEKSFGKGAIMKMDGSQQEENLEVISTGSLGLDLALGVGGLPRGRIVEIFGPESSGKTTLCLEAV
AQCQKNGGVCAFVDAEHAFDPVYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGIDMVVVDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTGHIKKTNTLVVFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRTGSIKKGEEVLGN
ETRVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKNDIINKSGAWYSYNGAKIGQGKDNVRVWLKENPEISDEID
AKIRALNGVEMHITEGTQDETDGERPEE
Nucleotide
Download Length: 1047 bp
>NTDB_id=69266 EP180_RS04300 WP_003688695.1 738012..739058(+) (recA) [Neisseria gonorrhoeae strain FC498]
ATGTCAGACGACAAAAGCAAAGCCCTTGCCGCCGCACTGGCGCAAATCGAAAAAAGTTTCGGCAAAGGCGCCATCATGAA
AATGGACGGCAGCCAGCAGGAAGAAAACCTCGAAGTCATTTCCACCGGATCGCTCGGATTAGACCTCGCCCTCGGAGTCG
GCGGCCTGCCGCGCGGGCGCATCGTCGAAATCTTCGGCCCCGAATCCTCCGGCAAAACCACACTCTGCCTCGAAGCCGTC
GCCCAATGCCAGAAAAACGGCGGCGTGTGCGCCTTTGTCGATGCCGAACACGCCTTCGATCCCGTTTACGCCCGCAAACT
CGGCGTAAAAGTCGAAGAGCTTTACCTGTCCCAGCCCGATACCGGCGAACAGGCTTTGGAAATCTGCGACACGCTCGTCC
GTTCGGGCGGCATAGATATGGTAGTCGTCGATTCCGTAGCCGCACTCGTCCCCAAAGCCGAAATCGAAGGCGATATGGGG
GACAGCCACGTCGGACTGCAGGCGCGCCTGATGAGTCAGGCTTTGCGCAAACTGACCGGACACATCAAAAAAACCAATAC
GCTGGTTGTGTTCATCAACCAAATCCGAATGAAGATCGGCGTAATGTTCGGCAGCCCCGAGACCACGACCGGCGGCAACG
CGCTGAAATTCTATTCTTCCGTCCGCCTCGACATCCGCCGCACCGGATCCATCAAAAAAGGCGAAGAAGTATTGGGCAAC
GAAACCCGCGTCAAAGTCATCAAAAACAAAGTCGCCCCCCCGTTCCGTCAGGCAGAGTTTGACATCCTCTACGGAGAAGG
CATCAGTTGGGAAGGCGAATTGATCGACATCGGCGTGAAAAACGACATCATCAACAAATCCGGCGCGTGGTACAGCTACA
ACGGCGCGAAAATCGGTCAGGGCAAAGACAACGTCCGCGTCTGGCTGAAAGAAAACCCCGAAATTTCCGACGAAATCGAC
GCAAAAATCCGCGCCCTCAACGGCGTAGAAATGCACATCACCGAAGGGACGCAGGACGAAACCGACGGCGAACGACCCGA
AGAATAA
ATGTCAGACGACAAAAGCAAAGCCCTTGCCGCCGCACTGGCGCAAATCGAAAAAAGTTTCGGCAAAGGCGCCATCATGAA
AATGGACGGCAGCCAGCAGGAAGAAAACCTCGAAGTCATTTCCACCGGATCGCTCGGATTAGACCTCGCCCTCGGAGTCG
GCGGCCTGCCGCGCGGGCGCATCGTCGAAATCTTCGGCCCCGAATCCTCCGGCAAAACCACACTCTGCCTCGAAGCCGTC
GCCCAATGCCAGAAAAACGGCGGCGTGTGCGCCTTTGTCGATGCCGAACACGCCTTCGATCCCGTTTACGCCCGCAAACT
CGGCGTAAAAGTCGAAGAGCTTTACCTGTCCCAGCCCGATACCGGCGAACAGGCTTTGGAAATCTGCGACACGCTCGTCC
GTTCGGGCGGCATAGATATGGTAGTCGTCGATTCCGTAGCCGCACTCGTCCCCAAAGCCGAAATCGAAGGCGATATGGGG
GACAGCCACGTCGGACTGCAGGCGCGCCTGATGAGTCAGGCTTTGCGCAAACTGACCGGACACATCAAAAAAACCAATAC
GCTGGTTGTGTTCATCAACCAAATCCGAATGAAGATCGGCGTAATGTTCGGCAGCCCCGAGACCACGACCGGCGGCAACG
CGCTGAAATTCTATTCTTCCGTCCGCCTCGACATCCGCCGCACCGGATCCATCAAAAAAGGCGAAGAAGTATTGGGCAAC
GAAACCCGCGTCAAAGTCATCAAAAACAAAGTCGCCCCCCCGTTCCGTCAGGCAGAGTTTGACATCCTCTACGGAGAAGG
CATCAGTTGGGAAGGCGAATTGATCGACATCGGCGTGAAAAACGACATCATCAACAAATCCGGCGCGTGGTACAGCTACA
ACGGCGCGAAAATCGGTCAGGGCAAAGACAACGTCCGCGTCTGGCTGAAAGAAAACCCCGAAATTTCCGACGAAATCGAC
GCAAAAATCCGCGCCCTCAACGGCGTAGAAATGCACATCACCGAAGGGACGCAGGACGAAACCGACGGCGAACGACCCGA
AGAATAA
Similar proteins
Only experimentally validated proteins are listed.