Detailed information NTG0068461

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GsYM18_RS00680
• Genome accession: NZ_AP017912
• Coordinates: 145483..146499 (+)
• Length: 338 a.a.
• NCBI ID: WP_119331462.1
• Uniprot ID: -
• Organism: Geobacter sulfurreducens strain YM18
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 140483..151499

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GsYM18_RS00665 (YM18_0134)	-	141486..141938 (+)	453	WP_119331459.1	phosphatidylglycerophosphatase A	-
GsYM18_RS00670 (YM18_0135)	-	141935..143176 (+)	1242	WP_119331460.1	competence/damage-inducible protein A	-
GsYM18_RS00675 (YM18_0136)	-	143221..145350 (+)	2130	WP_119331461.1	GAF domain-containing protein	-
GsYM18_RS00680 (YM18_0137)	recA	145483..146499 (+)	1017	WP_119331462.1	recombinase RecA	Machinery gene
GsYM18_RS00685 (YM18_0138)	-	146503..147659 (+)	1157	Protein_129	type IV pilus twitching motility protein PilT	-
GsYM18_RS00690	-	147688..148167 (+)	480	WP_119334012.1	regulatory protein RecX	-
GsYM18_RS00695 (YM18_0139)	alaS	148239..150866 (+)	2628	WP_119331463.1	alanine--tRNA ligase	-

Sequence

Protein

• Length: 338 a.a.
• Molecular weight: 36239.80 Da
• Isoelectric Point: 5.5657

>NTDB_id=68461 GsYM18_RS00680 WP_119331462.1 145483..146499(+) (recA) [Geobacter sulfurreducens strain YM18]
MTQEREKAIELALSQIEKQFGKGAIMRLGADEALPDVAAIPTGSLSLDLALGVGGVPRGRIIEIYGPESSGKTTLALHIA
AEAQKMGGIAAFVDAEHALDIGYARKLGVKTDDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMG
DSHMGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRKIASLKQGQDVIGS
RTKVKVVKNKVAPPFKEVEFDIYYGEGISREGDILDLAVEKGIVDKSGAWFSYGGDRIGQGRENSRLFLKERPELVDEIE
GKVYDVAGIPRKGAKEAA

Nucleotide

• Length: 1017 bp

>NTDB_id=68461 GsYM18_RS00680 WP_119331462.1 145483..146499(+) (recA) [Geobacter sulfurreducens strain YM18]
GTGACCCAAGAACGCGAAAAGGCGATAGAGCTTGCGCTCAGCCAGATAGAAAAGCAGTTCGGCAAGGGGGCGATCATGCG
CCTCGGGGCGGATGAGGCCCTCCCCGATGTGGCCGCCATCCCCACCGGTTCCCTCTCTCTCGACCTGGCCCTCGGCGTCG
GCGGCGTCCCCCGCGGGCGGATCATCGAGATCTACGGACCCGAGTCGTCGGGCAAGACGACGCTCGCCCTGCACATCGCG
GCCGAGGCCCAGAAAATGGGCGGCATCGCTGCCTTCGTCGACGCCGAGCACGCTCTCGATATCGGCTATGCCCGCAAACT
CGGTGTCAAGACGGACGACCTGCTCGTCTCCCAGCCCGACACCGGGGAGCAGGCCTTGGAAATCGCCGAGATGCTCGTCA
GAAGCGGTGCTGTGGACGTCCTCGTCATCGACTCGGTGGCGGCACTGGTTCCCAAGGCCGAGATCGAAGGGGAGATGGGT
GACTCCCACATGGGGCTCCAGGCCCGGCTCATGTCTCAGGCCCTGCGCAAGCTCACCGGCATCATCTCCAAGTCCAACTG
CTGCGTCATCTTCATCAACCAGATCCGGATGAAGATCGGCGTGATGTTCGGCAACCCCGAAACCACCACCGGCGGCAACG
CCCTCAAGTTTTACGCCTCGGTACGCCTCGATATCCGCAAGATCGCATCTCTCAAGCAAGGGCAGGACGTCATCGGCTCC
CGCACCAAGGTAAAAGTGGTCAAGAACAAGGTCGCTCCCCCCTTCAAAGAGGTGGAGTTCGACATCTACTACGGTGAGGG
CATTTCCCGCGAGGGCGACATCCTCGACCTGGCCGTGGAGAAGGGGATCGTGGACAAGAGCGGCGCCTGGTTCTCCTACG
GCGGTGATCGGATTGGCCAGGGGCGTGAAAATTCCCGCCTTTTCCTCAAGGAGCGGCCCGAGCTGGTGGACGAGATCGAA
GGGAAGGTTTACGACGTGGCCGGCATTCCCCGCAAAGGGGCGAAGGAAGCGGCATAG

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Ralstonia pseudosolanacearum GMI1000	71.257	98.817	0.704
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	67.879	97.633	0.663
recA	Glaesserella parasuis strain SC1401	68.827	95.858	0.66
recA	Pseudomonas stutzeri DSM 10701	68.421	95.562	0.654
recA	Acinetobacter baylyi ADP1	68.75	94.675	0.651
recA	Helicobacter pylori 26695	66.869	97.337	0.651
recA	Helicobacter pylori strain NCTC11637	66.869	97.337	0.651
recA	Acinetobacter baumannii D1279779	67.802	95.562	0.648
recA	Neisseria gonorrhoeae MS11	66.565	97.337	0.648
recA	Neisseria gonorrhoeae strain FA1090	66.565	97.337	0.648
recA	Neisseria gonorrhoeae MS11	66.565	97.337	0.648
recA	Bacillus subtilis subsp. subtilis str. 168	66.061	97.633	0.645
recA	Vibrio cholerae O1 biovar El Tor strain E7946	66.258	96.45	0.639
recA	Vibrio cholerae strain A1552	66.258	96.45	0.639
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	66.77	95.266	0.636
recA	Latilactobacillus sakei subsp. sakei 23K	62.952	98.225	0.618
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.303	96.746	0.612
recA	Streptococcus pyogenes NZ131	63.272	95.858	0.607
recA	Streptococcus pneumoniae Rx1	62.121	97.633	0.607
recA	Streptococcus pneumoniae D39	62.121	97.633	0.607
recA	Streptococcus pneumoniae R6	62.121	97.633	0.607
recA	Streptococcus pneumoniae TIGR4	62.121	97.633	0.607
recA	Lactococcus lactis subsp. cremoris KW2	61.818	97.633	0.604
recA	Streptococcus mutans UA159	62.654	95.858	0.601
recA	Streptococcus mitis NCTC 12261	62.654	95.858	0.601
recA	Streptococcus mitis SK321	62.346	95.858	0.598