Detailed information NTG0681828

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: N8A72_RS22855
• Genome accession: NZ_CP109924
• Coordinates: 4708480..4709505 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644903.1
• Uniprot ID: -
• Organism: Escherichia coli O125ac:K+:H10 strain C 236-04A
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4703480..4714505

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N8A72_RS22845 (N8A72_22845)	rpmE	4705711..4705923 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
N8A72_RS22850 (N8A72_22850)	priA	4706126..4708324 (+)	2199	WP_001295520.1	primosomal protein N'	Machinery gene
N8A72_RS22855 (N8A72_22855)	cytR	4708480..4709505 (+)	1026	WP_000644903.1	DNA-binding transcriptional regulator CytR	Regulator
N8A72_RS22860 (N8A72_22860)	ftsN	4709597..4710556 (+)	960	WP_000068828.1	cell division protein FtsN	-
N8A72_RS22865 (N8A72_22865)	hslV	4710649..4711179 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
N8A72_RS22870 (N8A72_22870)	hslU	4711189..4712520 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
N8A72_RS22875 (N8A72_22875)	menA	4712587..4713513 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
N8A72_RS22880 (N8A72_22880)	rraA	4713606..4714091 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
N8A72_RS22885 (N8A72_22885)	zapB	4714176..4714421 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37800.74 Da
• Isoelectric Point: 6.3001

>NTDB_id=681828 N8A72_RS22855 WP_000644903.1 4708480..4709505(+) (cytR) [Escherichia coli O125ac:K+:H10 strain C 236-04A]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKHQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=681828 N8A72_RS22855 WP_000644903.1 4708480..4709505(+) (cytR) [Escherichia coli O125ac:K+:H10 strain C 236-04A]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACACCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625