Detailed information NTG0067963

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CPY98_RS03900
• Genome accession: NZ_AP017469
• Coordinates: 837536..838588 (+)
• Length: 350 a.a.
• NCBI ID: WP_025801550.1
• Uniprot ID: A0A097QZ98
• Organism: Hafnia sp. CBA7124
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 832536..843588

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CPY98_RS03885	-	834221..835147 (-)	927	WP_096386435.1	winged helix-turn-helix domain-containing protein	-
CPY98_RS03890	mltB	835583..836683 (+)	1101	WP_025801552.1	lytic murein transglycosylase B	-
CPY98_RS03895	pncC	836975..837463 (+)	489	WP_043491073.1	nicotinamide-nucleotide amidase	-
CPY98_RS03900	recA	837536..838588 (+)	1053	WP_025801550.1	recombinase RecA	Machinery gene
CPY98_RS03905	recX	838655..839095 (+)	441	WP_025801549.1	recombination regulator RecX	-
CPY98_RS03910	alaS	839230..841857 (+)	2628	WP_043491077.1	alanine--tRNA ligase	-
CPY98_RS03915	csrA	842112..842297 (+)	186	WP_004091602.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 37392.68 Da
• Isoelectric Point: 5.0235

>NTDB_id=67963 CPY98_RS03900 WP_025801550.1 837536..838588(+) (recA) [Hafnia sp. CBA7124]
MDENKQRALAAALGQIEKQFGKGSIMRLGDTQTLDIDSVSTGSLSLDVALGIGGLPMGRVVEIFGPESSGKTTLTLSVIA
SAQAAGKTCAFIDAEHALDPIYAGKLGVQVDDLLISQPDTGEQALEICDALVRSGAVDVIVVDSVAALTPKAEIEGEMGD
SHVGLQARLMSQALRKLTANIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKDGDEVVGNE
TRVKVVKNKVAPPFRQAEFQILYGAGISKESELIDLGVKHKLVDKSGAWYAYNGDKIGQGKSNSMKYLQENPAIRAELDT
KLREMLLSHAAAENANHKPSADEELLEDDA

Nucleotide

• Length: 1053 bp

>NTDB_id=67963 CPY98_RS03900 WP_025801550.1 837536..838588(+) (recA) [Hafnia sp. CBA7124]
ATGGACGAGAACAAACAAAGGGCTCTAGCCGCTGCGTTAGGCCAGATTGAAAAGCAGTTCGGTAAAGGTTCCATTATGCG
TCTTGGTGATACCCAGACGTTGGATATTGATTCTGTATCTACAGGTTCTCTGAGTCTGGACGTTGCTCTGGGCATTGGTG
GTTTGCCGATGGGCCGTGTGGTTGAAATCTTCGGGCCAGAATCTTCCGGTAAAACTACGCTGACGCTGTCGGTTATTGCC
AGTGCACAGGCTGCGGGCAAAACTTGTGCGTTCATCGATGCTGAGCATGCGCTGGACCCAATCTACGCCGGTAAGTTAGG
TGTGCAGGTTGATGATTTGCTGATCTCTCAGCCAGATACCGGCGAACAGGCATTAGAAATTTGTGATGCTCTGGTGCGTT
CAGGCGCGGTTGACGTTATCGTTGTGGACTCCGTTGCTGCACTGACGCCAAAAGCAGAAATTGAAGGCGAGATGGGCGAT
TCCCATGTCGGCTTGCAAGCGCGTCTGATGTCTCAGGCGCTGCGTAAACTGACCGCTAATATCAAGAACGCGAACTGCTT
GGTTATCTTTATCAACCAGATCCGTATGAAAATCGGCGTCATGTTTGGTAACCCAGAAACCACCACCGGTGGGAATGCGC
TGAAGTTCTACTCTTCTGTTCGCTTAGATATCCGTCGTATCGGCGCGATTAAAGATGGCGATGAAGTTGTCGGTAACGAA
ACACGCGTGAAAGTGGTTAAAAACAAAGTTGCACCTCCATTCCGTCAGGCTGAATTCCAGATCCTTTACGGCGCGGGTAT
TTCTAAAGAAAGCGAACTGATCGATCTGGGTGTTAAGCATAAGCTGGTTGATAAATCCGGTGCTTGGTATGCCTATAACG
GCGACAAGATTGGTCAGGGTAAATCAAACTCCATGAAATACTTGCAGGAAAACCCGGCTATTCGTGCCGAGTTAGATACC
AAACTGCGTGAAATGTTGTTGAGCCACGCAGCCGCAGAGAACGCAAACCATAAGCCTTCAGCTGATGAAGAGCTGTTGGA
AGACGACGCGTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: A0A097QZ98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	77.843	98	0.763
recA	Vibrio cholerae strain A1552	80.488	93.714	0.754
recA	Vibrio cholerae O1 biovar El Tor strain E7946	80.488	93.714	0.754
recA	Glaesserella parasuis strain SC1401	72.622	99.143	0.72
recA	Acinetobacter baylyi ADP1	70.402	99.429	0.7
recA	Ralstonia pseudosolanacearum GMI1000	76.206	88.857	0.677
recA	Neisseria gonorrhoeae MS11	72.393	93.143	0.674
recA	Neisseria gonorrhoeae MS11	72.393	93.143	0.674
recA	Neisseria gonorrhoeae strain FA1090	72.393	93.143	0.674
recA	Acinetobacter baumannii D1279779	71.646	93.714	0.671
recA	Helicobacter pylori 26695	61.207	99.429	0.609
recA	Helicobacter pylori strain NCTC11637	61.207	99.429	0.609
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.771	91.143	0.609
recA	Bacillus subtilis subsp. subtilis str. 168	64.798	91.714	0.594
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.725	94.571	0.574
recA	Streptococcus pneumoniae R6	56.338	100	0.571
recA	Streptococcus pneumoniae Rx1	56.338	100	0.571
recA	Streptococcus pneumoniae D39	56.338	100	0.571
recA	Streptococcus pneumoniae TIGR4	56.338	100	0.571
recA	Latilactobacillus sakei subsp. sakei 23K	61.059	91.714	0.56
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.559	95.143	0.557
recA	Streptococcus mitis SK321	59.752	92.286	0.551
recA	Streptococcus mitis NCTC 12261	59.752	92.286	0.551
recA	Streptococcus mutans UA159	58.769	92.857	0.546
recA	Streptococcus pyogenes NZ131	57.846	92.857	0.537
recA	Lactococcus lactis subsp. cremoris KW2	57.276	92.286	0.529