Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   MO328_RS11220 Genome accession   NZ_CP093448
Coordinates   2636647..2637696 (-) Length   349 a.a.
NCBI ID   WP_003471577.1    Uniprot ID   A0A7G7SXX1
Organism   Xanthomonas translucens strain CIX207     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2631647..2642696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MO328_RS11195 (MO328_11185) - 2631675..2632670 (-) 996 WP_304532282.1 DUF6538 domain-containing protein -
  MO328_RS11205 (MO328_11195) csrA 2632926..2633135 (-) 210 WP_003471584.1 carbon storage regulator CsrA -
  MO328_RS11210 (MO328_11200) alaS 2633274..2635922 (-) 2649 WP_058359156.1 alanine--tRNA ligase -
  MO328_RS11215 (MO328_11205) recX 2636029..2636526 (-) 498 WP_003471579.1 recombination regulator RecX -
  MO328_RS11220 (MO328_11210) recA 2636647..2637696 (-) 1050 WP_003471577.1 recombinase RecA Machinery gene
  MO328_RS11225 (MO328_11215) lexA 2637882..2638517 (-) 636 WP_003471576.1 transcriptional repressor LexA -
  MO328_RS11230 (MO328_11220) - 2638670..2640346 (-) 1677 WP_003471575.1 AarF/UbiB family protein -
  MO328_RS11235 (MO328_11225) - 2640376..2640870 (-) 495 WP_047324987.1 CinA family protein -
  MO328_RS11240 (MO328_11230) hflX 2641236..2642561 (-) 1326 WP_058362999.1 ribosome rescue GTPase HflX -

Sequence

Protein


Download         Length: 349 a.a.        Molecular weight: 37491.08 Da        Isoelectric Point: 4.9761

>NTDB_id=664748 MO328_RS11220 WP_003471577.1 2636647..2637696(-) (recA) [Xanthomonas translucens strain CIX207]
MDENKKRALAAALSQIEKQFGKGSVMRMGDRIIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKKGGTAAFIDAEHALDPIYAGKLGVNVDELLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVITEILYGEGISREGELIDMGVEAKLVEKAGAWYSYGSERIGQGKDNSRQYLRDNPQVAAKL
ESELREKFQPTEVAPSAAEAEDADADAEA

Nucleotide


Download         Length: 1050 bp        

>NTDB_id=664748 MO328_RS11220 WP_003471577.1 2636647..2637696(-) (recA) [Xanthomonas translucens strain CIX207]
ATGGACGAGAACAAGAAGCGCGCGCTCGCTGCCGCTCTGAGCCAGATCGAGAAGCAGTTCGGCAAGGGTTCGGTGATGCG
GATGGGCGATCGCATCATCGAGGCCGTCGAGGTGATTCCGACCGGCTCGCTGATGCTGGATATCGCGCTGGGCATCGGCG
GCTTGCCGAAGGGCCGCGTCGTCGAGATCTACGGTCCGGAATCCTCGGGCAAGACCACGCTGACCCTGCAGGCCATCGCC
GAGTGCCAGAAGAAGGGCGGTACCGCGGCGTTCATCGATGCCGAGCATGCGCTGGACCCGATCTATGCCGGCAAGCTCGG
CGTCAACGTTGACGAACTGCTGCTGTCGCAGCCGGATACCGGCGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGTT
CGGGCTCGGTCGACATCGTGGTGGTCGACTCGGTCGCCGCGCTGACCCCGAAGGCCGAAATCGAAGGCGAGATGGGCGAC
CAGCTGCCGGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCTACGCAAGCTGACCGGCAACATCAAGCGCTCCAACACGCT
GGTGGTGTTCATCAACCAGCTGCGCATGAAGATCGGCGTGATGATGCCCGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGCGCGATCAAGAAGGGCGACGAGATCATCGGC
AATCAGACCAAGATCAAGGTTGTCAAGAACAAGCTGGCGCCCCCGTTCAAGCAGGTCATCACCGAGATCCTGTACGGCGA
GGGCATCAGCCGCGAAGGCGAGCTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGAGAAGGCCGGTGCCTGGTACAGCT
ACGGCAGCGAGCGCATCGGCCAGGGCAAGGACAATTCGCGCCAGTACCTGCGCGACAACCCGCAGGTGGCGGCGAAGCTG
GAAAGCGAGCTGCGCGAGAAGTTTCAGCCGACGGAAGTCGCGCCGAGCGCGGCTGAAGCCGAGGATGCCGACGCAGACGC
CGAGGCGTGA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G7SXX1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Pseudomonas stutzeri DSM 10701

69.828

99.713

0.696
  recA Acinetobacter baylyi ADP1

70.674

97.708

0.691
  recA Vibrio cholerae strain A1552

68.678

99.713

0.685
  recA Vibrio cholerae O1 biovar El Tor strain E7946

68.678

99.713

0.685
  recA Acinetobacter baumannii D1279779

71.903

94.842

0.682
  recA Ralstonia pseudosolanacearum GMI1000

75.316

90.544

0.682
  recA Glaesserella parasuis strain SC1401

65.23

99.713

0.65
  recA Neisseria gonorrhoeae MS11

69.018

93.41

0.645
  recA Neisseria gonorrhoeae MS11

69.018

93.41

0.645
  recA Neisseria gonorrhoeae strain FA1090

69.018

93.41

0.645
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.473

95.702

0.607
  recA Streptococcus mutans UA159

58.192

100

0.59
  recA Latilactobacillus sakei subsp. sakei 23K

61.934

94.842

0.587
  recA Bacillus subtilis subsp. subtilis str. 168

63.077

93.123

0.587
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

64.062

91.691

0.587
  recA Helicobacter pylori strain NCTC11637

60.542

95.129

0.576
  recA Streptococcus mitis SK321

60.976

93.983

0.573
  recA Helicobacter pylori 26695

60.241

95.129

0.573
  recA Streptococcus pyogenes NZ131

60.303

94.556

0.57
  recA Streptococcus pneumoniae TIGR4

60.366

93.983

0.567
  recA Streptococcus pneumoniae Rx1

60.366

93.983

0.567
  recA Streptococcus mitis NCTC 12261

60.366

93.983

0.567
  recA Streptococcus pneumoniae D39

60.366

93.983

0.567
  recA Streptococcus pneumoniae R6

60.366

93.983

0.567
  recA Lactococcus lactis subsp. cremoris KW2

59.385

93.123

0.553
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

58.896

93.41

0.55