Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | MNO08_RS05780 | Genome accession | NZ_CP093333 |
| Coordinates | 1287406..1288464 (+) | Length | 352 a.a. |
| NCBI ID | WP_003189042.1 | Uniprot ID | A0A7Y7ZLK5 |
| Organism | Pseudomonas simiae strain H4-B59 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1272746..1288464 | 1287406..1288464 | within | 0 |
Gene organization within MGE regions
Location: 1272746..1288464
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNO08_RS05665 (MNO08_05665) | - | 1272746..1273234 (-) | 489 | WP_010212724.1 | type II toxin-antitoxin system antitoxin SocA domain-containing protein | - |
| MNO08_RS05670 (MNO08_05670) | - | 1273502..1274236 (+) | 735 | WP_010212723.1 | XRE family transcriptional regulator | - |
| MNO08_RS05675 (MNO08_05675) | - | 1274386..1274583 (+) | 198 | WP_021492473.1 | hypothetical protein | - |
| MNO08_RS05680 (MNO08_05680) | - | 1274834..1275178 (+) | 345 | WP_021492472.1 | phage holin family protein | - |
| MNO08_RS05685 (MNO08_05685) | - | 1275200..1275715 (+) | 516 | WP_010212719.1 | hypothetical protein | - |
| MNO08_RS05690 (MNO08_05690) | - | 1275719..1276330 (+) | 612 | WP_047541315.1 | phage baseplate assembly protein V | - |
| MNO08_RS05695 (MNO08_05695) | - | 1276340..1276672 (+) | 333 | WP_021492470.1 | phage baseplate protein | - |
| MNO08_RS05700 (MNO08_05700) | - | 1276669..1277664 (+) | 996 | WP_042571728.1 | baseplate J/gp47 family protein | - |
| MNO08_RS05705 (MNO08_05705) | - | 1277661..1278299 (+) | 639 | WP_021492468.1 | phage tail protein I | - |
| MNO08_RS05710 (MNO08_05710) | - | 1278296..1278826 (+) | 531 | WP_106118926.1 | hypothetical protein | - |
| MNO08_RS05715 (MNO08_05715) | - | 1278875..1279657 (+) | 783 | WP_010212713.1 | hypothetical protein | - |
| MNO08_RS05720 (MNO08_05720) | - | 1279659..1279961 (+) | 303 | WP_010212711.1 | hypothetical protein | - |
| MNO08_RS05725 (MNO08_05725) | - | 1280050..1280223 (+) | 174 | WP_021492464.1 | hypothetical protein | - |
| MNO08_RS05730 (MNO08_05730) | - | 1280226..1281392 (+) | 1167 | WP_042571729.1 | tail protein | - |
| MNO08_RS05735 (MNO08_05735) | - | 1281392..1281898 (+) | 507 | WP_010212707.1 | phage major tail tube protein | - |
| MNO08_RS05740 (MNO08_05740) | - | 1281952..1282524 (+) | 573 | WP_010212706.1 | phage tail assembly protein | - |
| MNO08_RS28095 | - | 1282521..1282646 (+) | 126 | WP_010212704.1 | hypothetical protein | - |
| MNO08_RS05745 (MNO08_05745) | - | 1282652..1284112 (+) | 1461 | WP_187516947.1 | tail tape measure protein | - |
| MNO08_RS05750 (MNO08_05750) | - | 1284112..1284495 (+) | 384 | WP_010212701.1 | phage tail protein | - |
| MNO08_RS05755 (MNO08_05755) | - | 1284488..1284700 (+) | 213 | WP_010212700.1 | tail protein X | - |
| MNO08_RS05760 (MNO08_05760) | - | 1284710..1285717 (+) | 1008 | WP_010212698.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| MNO08_RS05765 (MNO08_05765) | - | 1285724..1286281 (+) | 558 | WP_010212696.1 | glycoside hydrolase family 19 protein | - |
| MNO08_RS05770 (MNO08_05770) | - | 1286269..1286739 (+) | 471 | WP_029529227.1 | lysis system i-spanin subunit Rz | - |
| MNO08_RS05775 (MNO08_05775) | - | 1286821..1287321 (+) | 501 | WP_010212691.1 | nicotinamide-nucleotide amidohydrolase family protein | - |
| MNO08_RS05780 (MNO08_05780) | recA | 1287406..1288464 (+) | 1059 | WP_003189042.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37580.12 Da Isoelectric Point: 5.3036
>NTDB_id=663712 MNO08_RS05780 WP_003189042.1 1287406..1288464(+) (recA) [Pseudomonas simiae strain H4-B59]
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTAAPDVKAAANREPVEEVEEADTDI
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTAAPDVKAAANREPVEEVEEADTDI
Nucleotide
Download Length: 1059 bp
>NTDB_id=663712 MNO08_RS05780 WP_003189042.1 1287406..1288464(+) (recA) [Pseudomonas simiae strain H4-B59]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTCATTGCC
CAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGACCCTGAATACGCCGGCAAACTGGG
CGTCAACGTTGACGACCTGCTGGTTTCCCAGCCAGACACCGGTGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTGCCCAAGGCTGAAATCGAAGGCGAAATGGGTGAT
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAAATCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAAGAAGGTGACGAGGTTGTGGGTAGTGAA
ACCCGCGTCAAAGTCGTGAAGAACAAAGTGGCTCCGCCTTTCCGTCAGGCCGAGTTCCAGATTCTCTACGGCAAGGGTAT
CTACCTGAACGGCGAGATGATCGACCTGGGCGTGTTGCACGGTTTCGTCGAGAAATCGGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGCCAAGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGACAACCCGGACATCGCTGCCACACTTGAAAAG
CAGATTCGCGACAAGCTGCTGACCGCCGCTCCAGACGTGAAAGCTGCCGCCAACCGCGAGCCGGTTGAAGAAGTGGAAGA
AGCTGATACTGACATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCGCTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTCATTGCC
CAGGCGCAGAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGACCCTGAATACGCCGGCAAACTGGG
CGTCAACGTTGACGACCTGCTGGTTTCCCAGCCAGACACCGGTGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTGCCCAAGGCTGAAATCGAAGGCGAAATGGGTGAT
ATGCACGTGGGCCTGCAAGCCCGTCTGATGTCCCAGGCGCTGCGTAAAATCACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAAATCCGTATGAAGATCGGCGTGATGTTCGGCAGCCCGGAAACCACCACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGATATCCGCCGTACTGGCGCGGTGAAAGAAGGTGACGAGGTTGTGGGTAGTGAA
ACCCGCGTCAAAGTCGTGAAGAACAAAGTGGCTCCGCCTTTCCGTCAGGCCGAGTTCCAGATTCTCTACGGCAAGGGTAT
CTACCTGAACGGCGAGATGATCGACCTGGGCGTGTTGCACGGTTTCGTCGAGAAATCGGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGCCAAGGCAAGGCCAACTCGGCCAAGTTCCTGGCGGACAACCCGGACATCGCTGCCACACTTGAAAAG
CAGATTCGCGACAAGCTGCTGACCGCCGCTCCAGACGTGAAAGCTGCCGCCAACCGCGAGCCGGTTGAAGAAGTGGAAGA
AGCTGATACTGACATCTGA
Similar proteins
Only experimentally validated proteins are listed.