Detailed information NTG0066297

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: CHSO_RS21940
• Genome accession: NZ_AP014624
• Coordinates: 4856058..4857068 (+)
• Length: 336 a.a.
• NCBI ID: WP_045500876.1
• Uniprot ID: A0A077KNB4
• Organism: Chryseobacterium sp. StRB126
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4851058..4862068

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CHSO_RS21920 (CHSO_4269)	-	4851830..4852207 (-)	378	WP_045500871.1	hypothetical protein	-
CHSO_RS21925 (CHSO_4270)	-	4852411..4853208 (+)	798	WP_045503147.1	response regulator transcription factor	-
CHSO_RS21930 (CHSO_4271)	-	4853290..4854474 (+)	1185	WP_045500874.1	oxygenase MpaB family protein	-
CHSO_RS21935 (CHSO_4272)	-	4854486..4855670 (-)	1185	WP_045503150.1	hypothetical protein	-
CHSO_RS21940 (CHSO_4274)	recA	4856058..4857068 (+)	1011	WP_045500876.1	recombinase RecA	Machinery gene
CHSO_RS21945 (CHSO_4275)	-	4857123..4858580 (-)	1458	WP_045500878.1	hypothetical protein	-
CHSO_RS21950 (CHSO_4276)	-	4858739..4861618 (-)	2880	WP_045503153.1	prolyl oligopeptidase family serine peptidase	-

Sequence

Protein

• Length: 336 a.a.
• Molecular weight: 36175.70 Da
• Isoelectric Point: 5.8971

>NTDB_id=66297 CHSO_RS21940 WP_045500876.1 4856058..4857068(+) (recA) [Chryseobacterium sp. StRB126]
MSNIDDKKKALALVLDKLDKTYGKGTVMTLGDASIDNTIEVIPSGSLGLDIALGIGGYPKGRIIEIYGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRTYAAKLGIDLENLIISQPDNGEQALEIADNLIRSGAIDIVVIDSVAALTPKAEIEGE
MGDSKMGLHARLMSQALRKLTATISRTKCTVIFINQLREKIGVMFGNPETTTGGNALKFYASVRIDIRKASAPIKQGDEA
IGSRVKVKIVKNKVAPPFKQAEFDIMYGEGVSKVGEILDTAVDMGIVKKSGSWFSYEESKLGQGRDAVKDVLKDNPELAE
ELENKIKEELKKQIIK

Nucleotide

• Length: 1011 bp

>NTDB_id=66297 CHSO_RS21940 WP_045500876.1 4856058..4857068(+) (recA) [Chryseobacterium sp. StRB126]
ATGAGTAATATTGATGATAAGAAAAAAGCACTTGCACTAGTGCTTGACAAGCTAGATAAAACATACGGGAAGGGAACGGT
AATGACTTTAGGTGATGCTTCTATAGACAATACAATAGAGGTAATTCCTTCCGGATCTTTAGGATTAGATATCGCATTAG
GTATAGGAGGATATCCAAAAGGAAGAATCATTGAAATATATGGACCTGAATCTTCAGGTAAAACTACATTAACACTTCAC
GCTATTGCTGAAGCTCAAAAAGCAGGTGGTATTGCTGCATTTATTGACGCTGAGCACGCTTTCGACAGAACTTATGCTGC
AAAACTAGGAATCGATTTGGAAAACCTTATCATTTCTCAGCCGGACAACGGAGAACAGGCTTTAGAAATTGCTGATAACC
TGATCCGTTCAGGAGCTATTGACATTGTTGTTATTGACTCTGTTGCTGCCCTTACTCCAAAAGCAGAGATTGAAGGAGAA
ATGGGAGATTCTAAAATGGGGCTTCATGCAAGATTGATGTCTCAGGCATTAAGAAAGCTTACAGCTACTATTTCAAGAAC
GAAATGTACTGTAATTTTCATCAACCAGTTGAGAGAAAAGATCGGTGTAATGTTCGGTAACCCTGAAACAACTACCGGTG
GTAACGCTCTTAAATTCTACGCTTCTGTAAGAATTGATATCAGAAAAGCAAGTGCTCCAATCAAACAAGGTGACGAAGCT
ATCGGAAGCCGTGTGAAAGTGAAGATCGTGAAAAACAAAGTAGCTCCACCTTTCAAACAAGCAGAATTCGACATTATGTA
CGGTGAGGGAGTTTCTAAAGTAGGAGAAATTCTTGATACTGCAGTTGATATGGGAATTGTAAAGAAAAGTGGTTCTTGGT
TCAGCTATGAAGAATCTAAACTAGGCCAAGGGCGTGATGCTGTAAAAGATGTTTTAAAAGACAATCCTGAACTTGCCGAG
GAATTGGAAAACAAGATCAAAGAAGAGTTGAAAAAACAAATAATAAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-272)

3D structure

• AlphaFold DB: A0A077KNB4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	80.665	98.512	0.795
recA	Acinetobacter baylyi ADP1	65.031	97.024	0.631
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.832	97.321	0.631
recA	Acinetobacter baumannii D1279779	64.724	97.024	0.628
recA	Glaesserella parasuis strain SC1401	64.22	97.321	0.625
recA	Helicobacter pylori 26695	63.609	97.321	0.619
recA	Helicobacter pylori strain NCTC11637	63.609	97.321	0.619
recA	Ralstonia pseudosolanacearum GMI1000	65.815	93.155	0.613
recA	Bacillus subtilis subsp. subtilis str. 168	62.577	97.024	0.607
recA	Neisseria gonorrhoeae strain FA1090	62.539	96.131	0.601
recA	Neisseria gonorrhoeae MS11	62.539	96.131	0.601
recA	Neisseria gonorrhoeae MS11	62.539	96.131	0.601
recA	Pseudomonas stutzeri DSM 10701	61.963	97.024	0.601
recA	Streptococcus mitis NCTC 12261	61.043	97.024	0.592
recA	Streptococcus mitis SK321	61.043	97.024	0.592
recA	Streptococcus pyogenes NZ131	60.856	97.321	0.592
recA	Vibrio cholerae strain A1552	60.245	97.321	0.586
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.245	97.321	0.586
recA	Lactococcus lactis subsp. cremoris KW2	60.123	97.024	0.583
recA	Streptococcus mutans UA159	59.939	97.321	0.583
recA	Streptococcus pneumoniae D39	59.146	97.619	0.577
recA	Streptococcus pneumoniae TIGR4	59.146	97.619	0.577
recA	Streptococcus pneumoniae R6	59.146	97.619	0.577
recA	Streptococcus pneumoniae Rx1	59.146	97.619	0.577
recA	Latilactobacillus sakei subsp. sakei 23K	58.514	96.131	0.563
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	56.135	97.024	0.545