Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   MNY64_RS03660 Genome accession   NZ_CP093249
Coordinates   847660..848733 (+) Length   357 a.a.
NCBI ID   WP_047255013.1    Uniprot ID   -
Organism   Moellerella wisconsensis strain W18-2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 842660..853733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MNY64_RS03640 (MNY64_03640) aroL 843086..843598 (+) 513 WP_241543561.1 shikimate kinase AroL -
  MNY64_RS03645 (MNY64_03645) aas 843686..845830 (+) 2145 WP_241543562.1 bifunctional acyl-ACP--phospholipid O-acyltransferase/long-chain-fatty-acid--ACP ligase -
  MNY64_RS03650 (MNY64_03650) lplT 845834..847036 (+) 1203 WP_047255011.1 lysophospholipid transporter LplT -
  MNY64_RS03655 (MNY64_03655) pncC 847051..847566 (+) 516 WP_047255012.1 nicotinamide-nucleotide amidase -
  MNY64_RS03660 (MNY64_03660) recA 847660..848733 (+) 1074 WP_047255013.1 recombinase RecA Machinery gene
  MNY64_RS03665 (MNY64_03665) alaS 849121..851751 (+) 2631 WP_241543563.1 alanine--tRNA ligase -
  MNY64_RS03670 (MNY64_03670) csrA 851976..852161 (+) 186 WP_047255015.1 carbon storage regulator CsrA -

Sequence

Protein


Download         Length: 357 a.a.        Molecular weight: 38426.70 Da        Isoelectric Point: 5.0713

>NTDB_id=662827 MNY64_RS03660 WP_047255013.1 847660..848733(+) (recA) [Moellerella wisconsensis strain W18-2]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDVALGAGGLPLGRIVEIYGPESSGKTTLTLQV
IASAQREGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKNSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKNGEEVVG
SETRVKVVKNKVAAPFKQAEFQILYGEGINTYGELIDLGVKHKLIEKAGAWYSYKGDKIGQGKANSTNYLKEHQDIATEI
DHNLREMLLNHAGEFSSAASDFEAEKDDADKSAKEEF

Nucleotide


Download         Length: 1074 bp        

>NTDB_id=662827 MNY64_RS03660 WP_047255013.1 847660..848733(+) (recA) [Moellerella wisconsensis strain W18-2]
ATGGCTATTGATGAAAACAAACAGAAAGCACTTGCAGCAGCACTGGGTCAAATTGAGAAACAATTTGGTAAAGGCTCTAT
TATGCGTCTGGGTGAAGACCGCTCGATGGATGTCGAAACCATATCAACAGGTTCTTTGTCTCTTGATGTAGCCTTGGGGG
CTGGTGGCCTGCCACTCGGTCGTATTGTTGAAATTTACGGGCCTGAATCTTCCGGTAAAACGACTTTAACTTTGCAAGTT
ATTGCTTCTGCACAGCGTGAAGGTAAAACCTGCGCATTTATTGATGCTGAGCATGCTCTTGACCCTGTTTATGCGAAAAA
ATTGGGCGTTGATATTGATAACTTGTTGTGTTCTCAACCTGACACTGGCGAACAAGCATTAGAAATTTGTGATGCATTGA
CTCGCTCAGGTGCCGTTGACGTTATTGTTGTTGACTCCGTTGCCGCATTGACACCAAAAGCTGAAATTGAAGGTGAAATT
GGTGATTCACATATGGGACTGGCTGCACGTATGATGAGTCAGGCAATGCGTAAGTTAGCTGGTAACCTTAAAAATTCCAA
TACCTTGTTAATCTTCATTAACCAAATTCGTATGAAAATTGGTGTGATGTTCGGTAATCCAGAAACCACAACGGGTGGTA
ACGCACTGAAATTTTATGCTTCTGTTCGTTTAGATATCCGTCGTATCGGTGCGGTGAAAAACGGCGAAGAAGTTGTCGGC
AGTGAAACGCGCGTTAAAGTGGTAAAAAACAAAGTTGCAGCGCCATTTAAACAAGCTGAATTCCAAATTCTGTACGGTGA
AGGCATTAACACTTATGGTGAATTAATTGATTTAGGTGTTAAACATAAATTAATTGAGAAAGCTGGTGCTTGGTATAGCT
ATAAAGGCGATAAAATTGGTCAAGGTAAAGCAAATTCCACCAATTATTTGAAAGAGCATCAAGATATCGCGACAGAAATC
GATCATAATCTGCGCGAGATGTTATTGAATCATGCCGGCGAATTTAGCAGCGCAGCTTCAGATTTCGAAGCTGAAAAAGA
CGATGCTGATAAATCAGCAAAAGAAGAATTTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(9-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Vibrio cholerae strain A1552

82.081

96.919

0.796
  recA Vibrio cholerae O1 biovar El Tor strain E7946

82.081

96.919

0.796
  recA Pseudomonas stutzeri DSM 10701

75.229

91.597

0.689
  recA Acinetobacter baylyi ADP1

71.014

96.639

0.686
  recA Acinetobacter baumannii D1279779

74.006

91.597

0.678
  recA Glaesserella parasuis strain SC1401

66.572

98.88

0.658
  recA Neisseria gonorrhoeae MS11

69.018

91.317

0.63
  recA Neisseria gonorrhoeae MS11

69.018

91.317

0.63
  recA Neisseria gonorrhoeae strain FA1090

69.018

91.317

0.63
  recA Ralstonia pseudosolanacearum GMI1000

70.418

87.115

0.613
  recA Streptococcus pneumoniae R6

60.745

97.759

0.594
  recA Streptococcus pneumoniae Rx1

60.745

97.759

0.594
  recA Streptococcus pneumoniae D39

60.745

97.759

0.594
  recA Streptococcus pneumoniae TIGR4

60.745

97.759

0.594
  recA Helicobacter pylori strain NCTC11637

63.303

91.597

0.58
  recA Helicobacter pylori 26695

62.997

91.597

0.577
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.95

89.356

0.571
  recA Bacillus subtilis subsp. subtilis str. 168

63.24

89.916

0.569
  recA Streptococcus mitis NCTC 12261

62.848

90.476

0.569
  recA Streptococcus mitis SK321

62.539

90.476

0.566
  recA Lactococcus lactis subsp. cremoris KW2

62.229

90.476

0.563
  recA Latilactobacillus sakei subsp. sakei 23K

61.538

91.036

0.56
  recA Streptococcus pyogenes NZ131

60.923

91.036

0.555
  recA Streptococcus mutans UA159

60.923

91.036

0.555
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

59.036

92.997

0.549
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

60.883

88.796

0.541