Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | MNU31_RS04915 | Genome accession | NZ_CP093179 |
| Coordinates | 1005864..1006913 (+) | Length | 349 a.a. |
| NCBI ID | WP_002439552.1 | Uniprot ID | A0A0Q1CVH7 |
| Organism | Staphylococcus epidermidis strain TMDU-190 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 925900..1018392 | 1005864..1006913 | within | 0 |
Gene organization within MGE regions
Location: 925900..1018392
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MNU31_RS04575 (MNU31_04580) | rlmN | 926151..927245 (+) | 1095 | WP_001830070.1 | 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN | - |
| MNU31_RS04580 (MNU31_04585) | - | 927252..927995 (+) | 744 | WP_002439460.1 | Stp1/IreP family PP2C-type Ser/Thr phosphatase | - |
| MNU31_RS04585 (MNU31_04590) | pknB | 927992..929995 (+) | 2004 | WP_002456582.1 | Stk1 family PASTA domain-containing Ser/Thr kinase | - |
| MNU31_RS04590 (MNU31_04595) | rsgA | 930304..931179 (+) | 876 | WP_002469378.1 | ribosome small subunit-dependent GTPase A | - |
| MNU31_RS04595 (MNU31_04600) | rpe | 931180..931824 (+) | 645 | WP_001830173.1 | ribulose-phosphate 3-epimerase | - |
| MNU31_RS04600 (MNU31_04605) | - | 931829..932464 (+) | 636 | WP_001830164.1 | thiamine diphosphokinase | - |
| MNU31_RS04605 (MNU31_04610) | rpmB | 932547..932735 (-) | 189 | WP_001830107.1 | 50S ribosomal protein L28 | - |
| MNU31_RS04610 (MNU31_04615) | - | 933093..933467 (+) | 375 | WP_001830156.1 | Asp23/Gls24 family envelope stress response protein | - |
| MNU31_RS04615 (MNU31_04620) | fakA | 933482..935140 (+) | 1659 | WP_002456580.1 | fatty acid kinase catalytic subunit FakA | - |
| MNU31_RS04620 (MNU31_04625) | recG | 935344..937392 (+) | 2049 | WP_002456579.1 | ATP-dependent DNA helicase RecG | - |
| MNU31_RS04625 (MNU31_04630) | fapR | 937551..938111 (+) | 561 | WP_001830099.1 | transcription factor FapR | - |
| MNU31_RS04630 (MNU31_04635) | plsX | 938113..939090 (+) | 978 | WP_002469384.1 | phosphate acyltransferase PlsX | - |
| MNU31_RS04635 (MNU31_04640) | fabD | 939092..940018 (+) | 927 | WP_002469385.1 | ACP S-malonyltransferase | - |
| MNU31_RS04640 (MNU31_04645) | fabG | 940011..940745 (+) | 735 | WP_001830161.1 | 3-oxoacyl-[acyl-carrier-protein] reductase | - |
| MNU31_RS04645 (MNU31_04650) | - | 940973..941206 (+) | 234 | WP_001830184.1 | acyl carrier protein | - |
| MNU31_RS04650 (MNU31_04655) | rnc | 941321..942058 (+) | 738 | WP_002456575.1 | ribonuclease III | - |
| MNU31_RS04655 (MNU31_04660) | smc | 942185..945754 (+) | 3570 | WP_254104884.1 | chromosome segregation protein SMC | - |
| MNU31_RS04660 (MNU31_04665) | ftsY | 945751..946977 (+) | 1227 | WP_002456573.1 | signal recognition particle-docking protein FtsY | - |
| MNU31_RS04665 (MNU31_04670) | - | 946979..947311 (+) | 333 | WP_002457379.1 | putative DNA-binding protein | - |
| MNU31_RS04670 (MNU31_04675) | ffh | 947342..948709 (+) | 1368 | WP_001830113.1 | signal recognition particle protein | - |
| MNU31_RS04675 (MNU31_04680) | rpsP | 949017..949292 (+) | 276 | WP_002439483.1 | 30S ribosomal protein S16 | - |
| MNU31_RS04680 (MNU31_04685) | rimM | 949419..949922 (+) | 504 | WP_001832559.1 | ribosome maturation factor RimM | - |
| MNU31_RS04685 (MNU31_04690) | trmD | 949922..950659 (+) | 738 | WP_001829466.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| MNU31_RS04690 (MNU31_04695) | rplS | 950765..951115 (+) | 351 | WP_002436293.1 | 50S ribosomal protein L19 | - |
| MNU31_RS04695 (MNU31_04700) | - | 951645..954248 (-) | 2604 | WP_002504748.1 | YfhO family protein | - |
| MNU31_RS04700 (MNU31_04705) | - | 954241..956841 (-) | 2601 | WP_002456571.1 | YfhO family protein | - |
| MNU31_RS04705 (MNU31_04710) | - | 957000..957149 (+) | 150 | WP_162154119.1 | hypothetical protein | - |
| MNU31_RS04710 (MNU31_04715) | ylqF | 957170..958033 (+) | 864 | WP_001829495.1 | ribosome biogenesis GTPase YlqF | - |
| MNU31_RS04715 (MNU31_04720) | - | 958038..958808 (+) | 771 | WP_001829514.1 | ribonuclease HII | - |
| MNU31_RS04720 (MNU31_04725) | sucC | 958916..960082 (+) | 1167 | WP_002439496.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| MNU31_RS04725 (MNU31_04730) | sucD | 960104..961012 (+) | 909 | WP_002446283.1 | succinate--CoA ligase subunit alpha | - |
| MNU31_RS04730 (MNU31_04735) | - | 961262..961477 (+) | 216 | Protein_928 | transposase | - |
| MNU31_RS04735 (MNU31_04740) | dprA | 961817..962689 (+) | 873 | WP_002484839.1 | DNA-processing protein DprA | Machinery gene |
| MNU31_RS04740 (MNU31_04745) | topA | 962872..964941 (+) | 2070 | WP_001829508.1 | type I DNA topoisomerase | - |
| MNU31_RS04745 (MNU31_04750) | trmFO | 964966..966273 (+) | 1308 | WP_001832560.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| MNU31_RS04750 (MNU31_04755) | xerC | 966498..967388 (+) | 891 | WP_002456225.1 | tyrosine recombinase XerC | - |
| MNU31_RS04755 (MNU31_04760) | hslV | 967392..967934 (+) | 543 | WP_001829498.1 | ATP-dependent protease subunit HslV | - |
| MNU31_RS04760 (MNU31_04765) | hslU | 968003..969406 (+) | 1404 | WP_001829474.1 | ATP-dependent protease ATPase subunit HslU | - |
| MNU31_RS04765 (MNU31_04770) | codY | 969430..970200 (+) | 771 | WP_002439506.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| MNU31_RS04770 (MNU31_04775) | rpsB | 970563..971351 (+) | 789 | WP_001832557.1 | 30S ribosomal protein S2 | - |
| MNU31_RS04775 (MNU31_04780) | tsf | 971503..972381 (+) | 879 | WP_002439509.1 | translation elongation factor Ts | - |
| MNU31_RS04780 (MNU31_04785) | pyrH | 972522..973244 (+) | 723 | WP_002439511.1 | UMP kinase | - |
| MNU31_RS04785 (MNU31_04790) | frr | 973261..973815 (+) | 555 | WP_001829472.1 | ribosome recycling factor | - |
| MNU31_RS04790 (MNU31_04795) | - | 974036..974806 (+) | 771 | WP_001832561.1 | isoprenyl transferase | - |
| MNU31_RS04795 (MNU31_04800) | - | 974810..975592 (+) | 783 | WP_001829499.1 | phosphatidate cytidylyltransferase | - |
| MNU31_RS04800 (MNU31_04805) | rseP | 975826..977112 (+) | 1287 | WP_001829501.1 | RIP metalloprotease RseP | - |
| MNU31_RS04805 (MNU31_04810) | - | 977131..978834 (+) | 1704 | WP_001829513.1 | proline--tRNA ligase | - |
| MNU31_RS04810 (MNU31_04815) | - | 979084..983394 (+) | 4311 | WP_254104915.1 | PolC-type DNA polymerase III | - |
| MNU31_RS04815 (MNU31_04820) | rimP | 983573..984040 (+) | 468 | WP_002439519.1 | ribosome maturation factor RimP | - |
| MNU31_RS04820 (MNU31_04825) | nusA | 984061..985284 (+) | 1224 | WP_002456565.1 | transcription termination factor NusA | - |
| MNU31_RS04825 (MNU31_04830) | - | 985302..985586 (+) | 285 | WP_001829465.1 | YlxR family protein | - |
| MNU31_RS04830 (MNU31_04835) | - | 985586..985903 (+) | 318 | WP_002439520.1 | YlxQ family RNA-binding protein | - |
| MNU31_RS04835 (MNU31_04840) | infB | 985908..988070 (+) | 2163 | WP_002468903.1 | translation initiation factor IF-2 | - |
| MNU31_RS04840 (MNU31_04845) | rbfA | 988373..988723 (+) | 351 | WP_172701952.1 | 30S ribosome-binding factor RbfA | - |
| MNU31_RS04845 (MNU31_04850) | truB | 988861..989778 (+) | 918 | WP_002456563.1 | tRNA pseudouridine(55) synthase TruB | - |
| MNU31_RS04850 (MNU31_04855) | - | 989794..990765 (+) | 972 | WP_001832563.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| MNU31_RS04855 (MNU31_04860) | rpsO | 990885..991154 (+) | 270 | WP_002439528.1 | 30S ribosomal protein S15 | - |
| MNU31_RS04860 (MNU31_04865) | pnp | 991286..993391 (+) | 2106 | WP_001832554.1 | polyribonucleotide nucleotidyltransferase | - |
| MNU31_RS04865 (MNU31_04870) | - | 993759..995432 (+) | 1674 | WP_002457357.1 | ribonuclease J | - |
| MNU31_RS04870 (MNU31_04875) | - | 995698..998091 (+) | 2394 | WP_002439534.1 | DNA translocase FtsK | - |
| MNU31_RS04875 (MNU31_04880) | - | 998094..998807 (+) | 714 | WP_002439536.1 | GntR family transcriptional regulator | - |
| MNU31_RS04880 (MNU31_04885) | - | 998838..1000109 (+) | 1272 | WP_002439538.1 | pitrilysin family protein | - |
| MNU31_RS04885 (MNU31_04890) | - | 1000109..1001398 (+) | 1290 | WP_001832569.1 | pitrilysin family protein | - |
| MNU31_RS04890 (MNU31_04895) | - | 1001395..1002099 (+) | 705 | WP_002439542.1 | SDR family oxidoreductase | - |
| MNU31_RS04895 (MNU31_04900) | - | 1002252..1003079 (+) | 828 | WP_002456562.1 | YmfK family protein | - |
| MNU31_RS04900 (MNU31_04905) | - | 1003098..1003490 (+) | 393 | WP_001832565.1 | helix-turn-helix domain-containing protein | - |
| MNU31_RS04905 (MNU31_04910) | pgsA | 1003519..1004100 (+) | 582 | WP_001829485.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| MNU31_RS04910 (MNU31_04915) | - | 1004548..1005693 (+) | 1146 | WP_001829470.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| MNU31_RS04915 (MNU31_04920) | recA | 1005864..1006913 (+) | 1050 | WP_002439552.1 | recombinase RecA | Machinery gene |
| MNU31_RS04920 (MNU31_04925) | rny | 1007139..1008698 (+) | 1560 | WP_001829512.1 | ribonuclease Y | - |
| MNU31_RS04925 (MNU31_04930) | - | 1008787..1009002 (-) | 216 | WP_002439555.1 | hypothetical protein | - |
| MNU31_RS04930 (MNU31_04935) | - | 1009166..1009960 (+) | 795 | WP_001832548.1 | TIGR00282 family metallophosphoesterase | - |
| MNU31_RS04935 (MNU31_04940) | - | 1010073..1011833 (+) | 1761 | WP_002469373.1 | 2-oxoacid:acceptor oxidoreductase subunit alpha | - |
| MNU31_RS04940 (MNU31_04945) | - | 1011834..1012700 (+) | 867 | WP_002439562.1 | 2-oxoacid:ferredoxin oxidoreductase subunit beta | - |
| MNU31_RS04945 (MNU31_04950) | - | 1013286..1013903 (+) | 618 | WP_001832558.1 | poly-gamma-glutamate hydrolase family protein | - |
| MNU31_RS04950 (MNU31_04955) | - | 1013960..1014250 (+) | 291 | WP_001829496.1 | MTH1187 family thiamine-binding protein | - |
| MNU31_RS04955 (MNU31_04960) | miaB | 1014593..1016137 (+) | 1545 | WP_002439565.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| MNU31_RS04960 (MNU31_04965) | - | 1016139..1016504 (+) | 366 | WP_001829463.1 | YlbF family regulator | - |
| MNU31_RS04965 (MNU31_04970) | thiW | 1016528..1017022 (+) | 495 | WP_001829480.1 | energy coupling factor transporter S component ThiW | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 37927.75 Da Isoelectric Point: 4.9995
>NTDB_id=662174 MNU31_RS04915 WP_002439552.1 1005864..1006913(+) (recA) [Staphylococcus epidermidis strain TMDU-190]
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKNYLKENPQIKEEIDR
KLREKLGIFDGDVDENENEDDSPKTLFDE
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRRVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKNYLKENPQIKEEIDR
KLREKLGIFDGDVDENENEDDSPKTLFDE
Nucleotide
Download Length: 1050 bp
>NTDB_id=662174 MNU31_RS04915 WP_002439552.1 1005864..1006913(+) (recA) [Staphylococcus epidermidis strain TMDU-190]
TTGGATAATGAACGTCAAAAAGCTTTAGATACAGTAATTAAAAACATGGAAAAATCTTTTGGTAAAGGTGCCGTTATGAA
GTTAGGCGATAATAAAGGTCGCAGAGTATCAAGCACTTCAAGTGGTTCTGTCACAGTTGATAATGCATTAGGGGTTGGAG
GTTATCCTAAAGGAAGAATTATCGAAATATATGGACCTGAAAGTTCAGGTAAGACGACAGTAGCTTTACATGCTATCGCT
GAAGTACAAAAAAACGGTGGTGTAGCAGCATTTATCGATGCCGAACATGCTCTCGATCCAGTATATGCACAAGCATTAGG
TGTAGATATTGATAATTTATATTTATCTCAACCTGATCATGGTGAACAAGGTCTTGAAATCGCCGAAGCTTTTGTTCGTA
GTGGTGCTGTGGACATTGTTGTTGTCGATTCAGTAGCAGCATTAACACCTAAAGCTGAAATTGAAGGTGAAATGGGAGAT
ACTCATGTTGGTTTACAAGCAAGATTAATGTCTCAAGCATTAAGAAAGTTATCAGGGGCTATTTCTAAATCTAATACTAC
AGCTATATTTATTAACCAAATTCGTGAAAAGGTCGGTGTGATGTTCGGGAATCCTGAAACAACGCCCGGTGGTAGAGCCC
TAAAATTCTATAGTTCTGTACGTTTAGAGGTAAGAAGAGCAGAGCAGTTAAAACAAGGTCAAGATATTGTAGGTAACAGA
ACCAAAATAAAAGTTGTAAAAAATAAAGTTGCACCTCCATTTAGAGTTGCAGAAGTAGATATTATGTATGGTCAAGGTAT
CTCTAAGGAAGGAGAGCTCATTGATTTAGGTGTAGAGAATGATATCGTTGATAAATCAGGTGCTTGGTATTCTTATAATG
GAGATAGAATGGGCCAAGGTAAAGAAAACGTCAAAAATTATCTTAAGGAAAATCCACAAATCAAAGAAGAAATTGACCGT
AAGTTACGTGAAAAGTTAGGTATTTTCGATGGTGATGTGGATGAAAATGAGAATGAAGACGATTCACCAAAAACTTTATT
TGATGAATAG
TTGGATAATGAACGTCAAAAAGCTTTAGATACAGTAATTAAAAACATGGAAAAATCTTTTGGTAAAGGTGCCGTTATGAA
GTTAGGCGATAATAAAGGTCGCAGAGTATCAAGCACTTCAAGTGGTTCTGTCACAGTTGATAATGCATTAGGGGTTGGAG
GTTATCCTAAAGGAAGAATTATCGAAATATATGGACCTGAAAGTTCAGGTAAGACGACAGTAGCTTTACATGCTATCGCT
GAAGTACAAAAAAACGGTGGTGTAGCAGCATTTATCGATGCCGAACATGCTCTCGATCCAGTATATGCACAAGCATTAGG
TGTAGATATTGATAATTTATATTTATCTCAACCTGATCATGGTGAACAAGGTCTTGAAATCGCCGAAGCTTTTGTTCGTA
GTGGTGCTGTGGACATTGTTGTTGTCGATTCAGTAGCAGCATTAACACCTAAAGCTGAAATTGAAGGTGAAATGGGAGAT
ACTCATGTTGGTTTACAAGCAAGATTAATGTCTCAAGCATTAAGAAAGTTATCAGGGGCTATTTCTAAATCTAATACTAC
AGCTATATTTATTAACCAAATTCGTGAAAAGGTCGGTGTGATGTTCGGGAATCCTGAAACAACGCCCGGTGGTAGAGCCC
TAAAATTCTATAGTTCTGTACGTTTAGAGGTAAGAAGAGCAGAGCAGTTAAAACAAGGTCAAGATATTGTAGGTAACAGA
ACCAAAATAAAAGTTGTAAAAAATAAAGTTGCACCTCCATTTAGAGTTGCAGAAGTAGATATTATGTATGGTCAAGGTAT
CTCTAAGGAAGGAGAGCTCATTGATTTAGGTGTAGAGAATGATATCGTTGATAAATCAGGTGCTTGGTATTCTTATAATG
GAGATAGAATGGGCCAAGGTAAAGAAAACGTCAAAAATTATCTTAAGGAAAATCCACAAATCAAAGAAGAAATTGACCGT
AAGTTACGTGAAAAGTTAGGTATTTTCGATGGTGATGTGGATGAAAATGAGAATGAAGACGATTCACCAAAAACTTTATT
TGATGAATAG
Similar proteins
Only experimentally validated proteins are listed.