Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | MMG96_RS08500 | Genome accession | NZ_CP092857 |
| Coordinates | 1732135..1733187 (-) | Length | 350 a.a. |
| NCBI ID | WP_002437037.1 | Uniprot ID | A0A4Q9WJI9 |
| Organism | Staphylococcus capitis strain LR 95 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1730575..1794259 | 1732135..1733187 | within | 0 |
Gene organization within MGE regions
Location: 1730575..1794259
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MMG96_RS08500 (MMG96_08500) | recA | 1732135..1733187 (-) | 1053 | WP_002437037.1 | recombinase RecA | Machinery gene |
| MMG96_RS08505 (MMG96_08505) | - | 1733356..1734504 (-) | 1149 | WP_030064817.1 | CinA family nicotinamide mononucleotide deamidase-related protein | - |
| MMG96_RS08510 (MMG96_08510) | pgsA | 1734646..1735227 (-) | 582 | WP_002469863.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| MMG96_RS08515 (MMG96_08515) | - | 1735255..1735647 (-) | 393 | WP_030064815.1 | helix-turn-helix domain-containing protein | - |
| MMG96_RS08520 (MMG96_08520) | - | 1735666..1736493 (-) | 828 | WP_030064813.1 | YmfK family protein | - |
| MMG96_RS08525 (MMG96_08525) | - | 1736651..1737358 (-) | 708 | WP_023350378.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| MMG96_RS08530 (MMG96_08530) | - | 1737358..1738644 (-) | 1287 | WP_030064811.1 | pitrilysin family protein | - |
| MMG96_RS08535 (MMG96_08535) | - | 1738644..1739918 (-) | 1275 | WP_030064809.1 | pitrilysin family protein | - |
| MMG96_RS08540 (MMG96_08540) | - | 1739960..1740670 (-) | 711 | WP_002436349.1 | GntR family transcriptional regulator | - |
| MMG96_RS08545 (MMG96_08545) | - | 1740673..1743093 (-) | 2421 | WP_023350382.1 | DNA translocase FtsK | - |
| MMG96_RS08550 (MMG96_08550) | - | 1743351..1745024 (-) | 1674 | WP_002469869.1 | ribonuclease J | - |
| MMG96_RS08555 (MMG96_08555) | pnp | 1745258..1747357 (-) | 2100 | WP_030064806.1 | polyribonucleotide nucleotidyltransferase | - |
| MMG96_RS08560 (MMG96_08560) | rpsO | 1747675..1747944 (-) | 270 | WP_002436359.1 | 30S ribosomal protein S15 | - |
| MMG96_RS08565 (MMG96_08565) | ribF | 1748066..1749037 (-) | 972 | WP_002436322.1 | riboflavin biosynthesis protein RibF | - |
| MMG96_RS08570 (MMG96_08570) | truB | 1749053..1749970 (-) | 918 | WP_002436304.1 | tRNA pseudouridine(55) synthase TruB | - |
| MMG96_RS08575 (MMG96_08575) | rbfA | 1750119..1750469 (-) | 351 | WP_002436301.1 | 30S ribosome-binding factor RbfA | - |
| MMG96_RS08580 (MMG96_08580) | infB | 1750626..1752791 (-) | 2166 | WP_030064804.1 | translation initiation factor IF-2 | - |
| MMG96_RS08585 (MMG96_08585) | - | 1752796..1753113 (-) | 318 | WP_030064802.1 | ribosomal L7Ae/L30e/S12e/Gadd45 family protein | - |
| MMG96_RS08590 (MMG96_08590) | - | 1753110..1753394 (-) | 285 | WP_002436310.1 | YlxR family protein | - |
| MMG96_RS08595 (MMG96_08595) | nusA | 1753411..1754634 (-) | 1224 | WP_002436342.1 | transcription termination factor NusA | - |
| MMG96_RS08600 (MMG96_08600) | rimP | 1754655..1755122 (-) | 468 | WP_002436317.1 | ribosome maturation factor RimP | - |
| MMG96_RS08605 (MMG96_08605) | - | 1755348..1759658 (-) | 4311 | WP_096389449.1 | PolC-type DNA polymerase III | - |
| MMG96_RS08610 (MMG96_08610) | - | 1759914..1761617 (-) | 1704 | WP_030064798.1 | proline--tRNA ligase | - |
| MMG96_RS08615 (MMG96_08615) | rseP | 1761637..1762923 (-) | 1287 | WP_030064796.1 | RIP metalloprotease RseP | - |
| MMG96_RS08620 (MMG96_08620) | - | 1763163..1763945 (-) | 783 | WP_002436308.1 | phosphatidate cytidylyltransferase | - |
| MMG96_RS08625 (MMG96_08625) | - | 1763949..1764719 (-) | 771 | WP_002436351.1 | isoprenyl transferase | - |
| MMG96_RS08630 (MMG96_08630) | frr | 1765000..1765554 (-) | 555 | WP_002436295.1 | ribosome recycling factor | - |
| MMG96_RS08635 (MMG96_08635) | pyrH | 1765572..1766294 (-) | 723 | WP_002436299.1 | UMP kinase | - |
| MMG96_RS08640 (MMG96_08640) | tsf | 1766431..1767309 (-) | 879 | WP_030064793.1 | translation elongation factor Ts | - |
| MMG96_RS08645 (MMG96_08645) | rpsB | 1767460..1768248 (-) | 789 | WP_002436327.1 | 30S ribosomal protein S2 | - |
| MMG96_RS08650 (MMG96_08650) | codY | 1768501..1769274 (-) | 774 | WP_002436324.1 | GTP-sensing pleiotropic transcriptional regulator CodY | - |
| MMG96_RS08655 (MMG96_08655) | hslU | 1769297..1770700 (-) | 1404 | WP_002436320.1 | ATP-dependent protease ATPase subunit HslU | - |
| MMG96_RS08660 (MMG96_08660) | hslV | 1770784..1771326 (-) | 543 | WP_023350393.1 | ATP-dependent protease subunit HslV | - |
| MMG96_RS08665 (MMG96_08665) | xerC | 1771330..1772220 (-) | 891 | WP_023350394.1 | tyrosine recombinase XerC | - |
| MMG96_RS08670 (MMG96_08670) | trmFO | 1772457..1773764 (-) | 1308 | WP_030064791.1 | FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO | - |
| MMG96_RS08675 (MMG96_08675) | topA | 1773790..1775865 (-) | 2076 | WP_030064789.1 | type I DNA topoisomerase | - |
| MMG96_RS08680 (MMG96_08680) | dprA | 1776043..1776915 (-) | 873 | WP_002436358.1 | DNA-processing protein DprA | Machinery gene |
| MMG96_RS08685 (MMG96_08685) | sucD | 1777141..1778049 (-) | 909 | WP_002436344.1 | succinate--CoA ligase subunit alpha | - |
| MMG96_RS08690 (MMG96_08690) | sucC | 1778071..1779237 (-) | 1167 | WP_002436291.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| MMG96_RS08695 (MMG96_08695) | - | 1779345..1780115 (-) | 771 | WP_030064786.1 | ribonuclease HII | - |
| MMG96_RS08700 (MMG96_08700) | ylqF | 1780099..1780982 (-) | 884 | Protein_1679 | ribosome biogenesis GTPase YlqF | - |
| MMG96_RS08705 (MMG96_08705) | - | 1781262..1783862 (+) | 2601 | WP_030064782.1 | YfhO family protein | - |
| MMG96_RS08710 (MMG96_08710) | - | 1783855..1786467 (+) | 2613 | WP_030064780.1 | YfhO family protein | - |
| MMG96_RS08715 (MMG96_08715) | - | 1786907..1787146 (+) | 240 | WP_228116314.1 | hypothetical protein | - |
| MMG96_RS08720 (MMG96_08720) | - | 1787186..1787524 (+) | 339 | WP_030064776.1 | hypothetical protein | - |
| MMG96_RS08725 (MMG96_08725) | rplS | 1788101..1788451 (-) | 351 | WP_002436293.1 | 50S ribosomal protein L19 | - |
| MMG96_RS08730 (MMG96_08730) | trmD | 1788557..1789294 (-) | 738 | WP_030064770.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| MMG96_RS08735 (MMG96_08735) | rimM | 1789294..1789797 (-) | 504 | WP_030064768.1 | ribosome maturation factor RimM | - |
| MMG96_RS08740 (MMG96_08740) | rpsP | 1790060..1790335 (-) | 276 | WP_002453071.1 | 30S ribosomal protein S16 | - |
| MMG96_RS08745 (MMG96_08745) | ffh | 1790759..1792126 (-) | 1368 | WP_002435148.1 | signal recognition particle protein | - |
| MMG96_RS08750 (MMG96_08750) | - | 1792156..1792488 (-) | 333 | WP_002435170.1 | putative DNA-binding protein | - |
| MMG96_RS08755 (MMG96_08755) | ftsY | 1792475..1793734 (-) | 1260 | WP_030064764.1 | signal recognition particle-docking protein FtsY | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 37971.88 Da Isoelectric Point: 4.9318
>NTDB_id=660844 MMG96_RS08500 WP_002437037.1 1732135..1733187(-) (recA) [Staphylococcus capitis strain LR 95]
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRKVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKTYLKENPQIKEEIDR
KLREKLGIFDGDVEETDAEEEAPKTLFDEE
MDNERQKALDTVIKNMEKSFGKGAVMKLGDNKGRKVSSTSSGSVTVDNALGVGGYPKGRIIEIYGPESSGKTTVALHAIA
EVQKNGGVAAFIDAEHALDPVYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTPKAEIEGEMGD
THVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGVMFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQDIVGNR
TKIKVVKNKVAPPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGDRMGQGKENVKTYLKENPQIKEEIDR
KLREKLGIFDGDVEETDAEEEAPKTLFDEE
Nucleotide
Download Length: 1053 bp
>NTDB_id=660844 MMG96_RS08500 WP_002437037.1 1732135..1733187(-) (recA) [Staphylococcus capitis strain LR 95]
TTGGATAACGAACGTCAAAAAGCTTTAGATACAGTTATAAAAAATATGGAGAAATCATTTGGTAAAGGTGCGGTTATGAA
ATTAGGCGACAATAAAGGTCGTAAAGTATCAAGCACATCAAGTGGTTCTGTAACAGTGGATAATGCCCTAGGTGTAGGTG
GTTATCCTAAAGGAAGAATTATAGAAATTTATGGACCTGAGAGTTCAGGTAAAACAACAGTTGCTTTACATGCAATTGCA
GAGGTTCAAAAAAACGGTGGAGTAGCTGCATTCATTGATGCTGAACACGCACTTGATCCTGTGTACGCTCAAGCTTTAGG
CGTAGATATTGACAACTTATACTTATCTCAACCTGATCATGGGGAACAGGGACTTGAAATTGCTGAAGCATTTGTTCGAA
GTGGTGCAGTTGATATTGTCGTGGTTGACTCAGTGGCAGCATTAACTCCTAAAGCTGAAATCGAAGGTGAAATGGGAGAT
ACACATGTCGGTTTACAAGCAAGATTAATGTCTCAAGCTTTAAGAAAATTATCTGGTGCAATTTCTAAATCAAACACAAC
TGCAATCTTTATTAACCAAATTCGTGAAAAAGTTGGTGTGATGTTTGGTAACCCAGAAACTACACCAGGTGGACGTGCAT
TAAAATTCTATAGTTCTGTAAGATTAGAAGTAAGAAGAGCTGAACAATTAAAACAAGGCCAAGATATCGTAGGTAACAGA
ACTAAAATCAAAGTTGTTAAAAATAAAGTAGCACCTCCATTCAGAGTAGCTGAAGTAGATATTATGTACGGTCAAGGTAT
TTCTAAAGAAGGCGAATTAATTGACTTAGGTGTTGAAAACGACATCGTTGATAAATCTGGTGCTTGGTACTCTTATAATG
GTGATCGAATGGGTCAAGGTAAAGAAAACGTTAAAACGTATTTAAAAGAAAACCCTCAAATTAAAGAAGAAATTGATCGT
AAATTACGAGAAAAATTAGGTATATTCGATGGAGACGTTGAAGAAACAGACGCTGAAGAAGAAGCACCTAAAACTTTATT
TGATGAAGAATAA
TTGGATAACGAACGTCAAAAAGCTTTAGATACAGTTATAAAAAATATGGAGAAATCATTTGGTAAAGGTGCGGTTATGAA
ATTAGGCGACAATAAAGGTCGTAAAGTATCAAGCACATCAAGTGGTTCTGTAACAGTGGATAATGCCCTAGGTGTAGGTG
GTTATCCTAAAGGAAGAATTATAGAAATTTATGGACCTGAGAGTTCAGGTAAAACAACAGTTGCTTTACATGCAATTGCA
GAGGTTCAAAAAAACGGTGGAGTAGCTGCATTCATTGATGCTGAACACGCACTTGATCCTGTGTACGCTCAAGCTTTAGG
CGTAGATATTGACAACTTATACTTATCTCAACCTGATCATGGGGAACAGGGACTTGAAATTGCTGAAGCATTTGTTCGAA
GTGGTGCAGTTGATATTGTCGTGGTTGACTCAGTGGCAGCATTAACTCCTAAAGCTGAAATCGAAGGTGAAATGGGAGAT
ACACATGTCGGTTTACAAGCAAGATTAATGTCTCAAGCTTTAAGAAAATTATCTGGTGCAATTTCTAAATCAAACACAAC
TGCAATCTTTATTAACCAAATTCGTGAAAAAGTTGGTGTGATGTTTGGTAACCCAGAAACTACACCAGGTGGACGTGCAT
TAAAATTCTATAGTTCTGTAAGATTAGAAGTAAGAAGAGCTGAACAATTAAAACAAGGCCAAGATATCGTAGGTAACAGA
ACTAAAATCAAAGTTGTTAAAAATAAAGTAGCACCTCCATTCAGAGTAGCTGAAGTAGATATTATGTACGGTCAAGGTAT
TTCTAAAGAAGGCGAATTAATTGACTTAGGTGTTGAAAACGACATCGTTGATAAATCTGGTGCTTGGTACTCTTATAATG
GTGATCGAATGGGTCAAGGTAAAGAAAACGTTAAAACGTATTTAAAAGAAAACCCTCAAATTAAAGAAGAAATTGATCGT
AAATTACGAGAAAAATTAGGTATATTCGATGGAGACGTTGAAGAAACAGACGCTGAAGAAGAAGCACCTAAAACTTTATT
TGATGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.