Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   MJX77_RS13335 Genome accession   NZ_CP092454
Coordinates   2798392..2799438 (-) Length   348 a.a.
NCBI ID   WP_004791877.1    Uniprot ID   A0A0A8JAG2
Organism   Acinetobacter sp. AHP123     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2793392..2804438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MJX77_RS13300 - 2793647..2794147 (+) 501 WP_004643108.1 OmpH family outer membrane protein -
  MJX77_RS13305 lpxD 2794152..2795222 (+) 1071 WP_049836884.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  MJX77_RS13310 fabZ 2795229..2795714 (+) 486 WP_003652176.1 3-hydroxyacyl-ACP dehydratase FabZ -
  MJX77_RS13315 lpxA 2795711..2796499 (+) 789 WP_003652175.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  MJX77_RS13320 - 2796562..2797425 (-) 864 WP_107880831.1 YbgF trimerization domain-containing protein -
  MJX77_RS13330 - 2797850..2798332 (-) 483 WP_252059328.1 regulatory protein RecX -
  MJX77_RS13335 recA 2798392..2799438 (-) 1047 WP_004791877.1 recombinase RecA Machinery gene
  MJX77_RS13340 - 2799584..2800012 (-) 429 WP_005306259.1 S4 domain-containing protein -
  MJX77_RS13345 - 2799996..2800682 (-) 687 WP_252059329.1 HAD-IA family hydrolase -
  MJX77_RS13350 - 2801085..2801378 (+) 294 WP_004791883.1 hypothetical protein -
  MJX77_RS13355 - 2801360..2801899 (-) 540 WP_252059330.1 GNAT family N-acetyltransferase -
  MJX77_RS13360 gigD 2801929..2802378 (-) 450 WP_252059331.1 Lrp/AsnC family transcriptional regulator GigD -
  MJX77_RS13365 kynU 2802526..2803776 (+) 1251 WP_252059332.1 kynureninase -

Sequence

Protein


Download         Length: 348 a.a.        Molecular weight: 37796.13 Da        Isoelectric Point: 4.9278

>NTDB_id=657735 MJX77_RS13335 WP_004791877.1 2798392..2799438(-) (recA) [Acinetobacter sp. AHP123]
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKTGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TRVKVVKNKMAPPFREAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRHFEENPQMAGEIER
NIREQLLTTGTNTAQVEDEEEVDLLLES

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=657735 MJX77_RS13335 WP_004791877.1 2798392..2799438(-) (recA) [Acinetobacter sp. AHP123]
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCGCTAAGTCAAATTGAGAAACAATTTGGCAAAAATACGGTGATGCG
TCTCGGTGACAACACTGTTCAAGCTGTTGAAGCTGTATCTACAGGCTCTTTGACTTTAGATATTGCATTGGGGATTGGCG
GTTTACCAAAAGGTCGTATTGTAGAGATTTATGGTCCAGAATCTTCTGGTAAAACCACAATGACTCTACAAGCAATTGCA
CAATGTCAAAAAACTGGTGGTACTTGTGCCTTTATCGATGCAGAGCACGCATTAGATCCACAATATGCACGTAAGCTTGG
TGTAGACATTGATAACCTGCTTGTATCGCAACCTGATAACGGTGAACAAGCACTCGAAATTGCAGATATGCTAGTCCGTT
CTGGTGCAATTGACTTAATCGTTGTCGACTCAGTCGCTGCACTTACTCCTAAAGCAGAAATTGAAGGTGAGATGGGTGAC
TCTCATATGGGCTTACAAGCTCGTCTAATGAGTCAGGCACTTCGTAAAATTACAGGTAATGCTAAACGTTCAAACTGTAT
GGTTATCTTCATTAACCAGATCCGTATGAAGATTGGGGTAATGTTTGGTAGTCCAGAAACTACAACTGGTGGTAACGCAT
TGAAGTTCTACGCTTCTGTACGTTTAGATATCCGCCGTATTGGCCAAGTAAAAGAAGGCGATGAAATCGTCGGCTCTGAA
ACCCGAGTTAAAGTGGTTAAAAACAAAATGGCTCCTCCTTTCAGAGAGGCTATTTTCCAAATCCTATATGGTAAAGGCAC
AAACCAGTTAGGCGAACTTGTAGATTTAGCTGTACAACAAGATATCGTACAAAAAGCAGGCGCTTGGTATTCATATCAAG
GTAATAAAATTGGTCAAGGTAAGAACAATGTTATTCGCCACTTTGAAGAAAACCCTCAAATGGCTGGGGAAATTGAACGT
AACATCCGTGAACAGTTATTAACAACTGGTACTAATACTGCTCAAGTTGAAGATGAAGAAGAAGTTGATCTTCTACTAGA
ATCTTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-267)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8JAG2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baumannii D1279779

96.562

100

0.968
  recA Acinetobacter baylyi ADP1

92.795

99.713

0.925
  recA Pseudomonas stutzeri DSM 10701

76.276

95.69

0.73
  recA Vibrio cholerae strain A1552

73.7

93.966

0.693
  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.7

93.966

0.693
  recA Glaesserella parasuis strain SC1401

71.914

93.103

0.67
  recA Ralstonia pseudosolanacearum GMI1000

70.122

94.253

0.661
  recA Neisseria gonorrhoeae MS11

67.656

96.839

0.655
  recA Neisseria gonorrhoeae MS11

67.656

96.839

0.655
  recA Neisseria gonorrhoeae strain FA1090

67.656

96.839

0.655
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

61.988

98.276

0.609
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.444

95.115

0.603
  recA Helicobacter pylori strain NCTC11637

63.914

93.966

0.601
  recA Helicobacter pylori 26695

63.609

93.966

0.598
  recA Streptococcus mutans UA159

59.026

100

0.592
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.27

93.678

0.583
  recA Streptococcus mitis SK321

59.238

97.989

0.58
  recA Streptococcus mitis NCTC 12261

59.238

97.989

0.58
  recA Streptococcus pneumoniae Rx1

58.721

98.851

0.58
  recA Streptococcus pneumoniae D39

58.721

98.851

0.58
  recA Streptococcus pneumoniae R6

58.721

98.851

0.58
  recA Streptococcus pneumoniae TIGR4

58.721

98.851

0.58
  recA Streptococcus pyogenes NZ131

61.231

93.391

0.572
  recA Bacillus subtilis subsp. subtilis str. 168

61.801

92.529

0.572
  recA Latilactobacillus sakei subsp. sakei 23K

58.567

92.241

0.54
  recA Lactococcus lactis subsp. cremoris KW2

58.204

92.816

0.54