Detailed information NTG0063864

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: GY50_RS07235
• Genome accession: NC_022964
• Coordinates: 1376612..1377625 (+)
• Length: 337 a.a.
• NCBI ID: WP_012882718.1
• Uniprot ID: A0A0C6EX13
• Organism: Dehalococcoides mccartyi GY50
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1371612..1382625

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GY50_RS07200 (GY50_1493)	tatC	1372858..1373646 (-)	789	WP_012882711.1	twin-arginine translocase subunit TatC	-
GY50_RS07205 (GY50_1494)	-	1373643..1373930 (-)	288	WP_023652925.1	twin-arginine translocase TatA/TatE family subunit	-
GY50_RS07210 (GY50_1495)	-	1373997..1374233 (-)	237	WP_012882713.1	twin-arginine translocase TatA/TatE family subunit	-
GY50_RS07215 (GY50_1496)	tatA	1374324..1374521 (-)	198	WP_012882714.1	twin-arginine translocase TatA/TatE family subunit	-
GY50_RS07220 (GY50_1497)	folP	1374748..1375596 (+)	849	WP_023652926.1	dihydropteroate synthase	-
GY50_RS07225 (GY50_1498)	folK	1375587..1376117 (+)	531	WP_023652927.1	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	-
GY50_RS07230 (GY50_1499)	queD	1376117..1376488 (+)	372	WP_023652928.1	6-carboxytetrahydropterin synthase QueD	-
GY50_RS07235 (GY50_1500)	recA	1376612..1377625 (+)	1014	WP_012882718.1	recombinase RecA	Machinery gene
GY50_RS07240 (GY50_1501)	-	1377714..1378358 (+)	645	WP_023652929.1	regulatory protein RecX	-
GY50_RS07245 (GY50_1502)	rny	1378427..1380010 (+)	1584	WP_023652930.1	ribonuclease Y	-
GY50_RS07250 (GY50_1503)	-	1380022..1380792 (+)	771	WP_023652931.1	TIGR00282 family metallophosphoesterase	-
GY50_RS07255 (GY50_1504)	-	1380795..1381658 (+)	864	WP_023652932.1	PHP domain-containing protein	-
GY50_RS07260 (GY50_1505)	-	1381655..1382353 (+)	699	WP_023652933.1	glycerol-3-phosphate acyltransferase	-

Sequence

Protein

• Length: 337 a.a.
• Molecular weight: 36146.51 Da
• Isoelectric Point: 6.2983

>NTDB_id=63864 GY50_RS07235 WP_012882718.1 1376612..1377625(+) (recA) [Dehalococcoides mccartyi GY50]
MTTEKDKALELTVGIIEKRFGKGSIMKLSDPSFRQTVEFIPTSSLALDIALGVGGIPRGRIAEIFGPEGSGKTTLAQHII
AQAQKMGEKAAYIDVEHALDPKYASTCGVNLDELLISQPDTGEEALGIAEELVRSTAIGVIVIDSVAALVPKAEIEGDMG
DSHVGLQARLMSQALRKLTSSIGQTRTAVIFINQLREKVGVMFGNPEVTPGGRALKFYSSVRIDLRRIETIKQGTIAVGT
RVRAKVVKNKVAPPFRTAEFDIMFDSGISREGNLIDLGVTSEVIRKAGAFFSYGDIRLGQGRESAKNYLAANPDLAQEIE
EKIRASAVTLCSIGDGD

Nucleotide

• Length: 1014 bp

>NTDB_id=63864 GY50_RS07235 WP_012882718.1 1376612..1377625(+) (recA) [Dehalococcoides mccartyi GY50]
ATGACCACGGAAAAAGATAAGGCACTGGAACTCACTGTCGGTATAATAGAAAAACGTTTTGGCAAGGGTTCAATAATGAA
ACTGAGTGACCCTTCCTTCCGGCAAACAGTTGAGTTCATCCCTACAAGTTCACTGGCACTTGATATTGCCCTGGGCGTTG
GCGGAATTCCCAGAGGACGGATAGCTGAAATATTCGGCCCTGAAGGCTCCGGCAAGACTACTCTTGCCCAGCATATTATT
GCCCAAGCCCAAAAAATGGGCGAAAAAGCCGCCTATATAGACGTGGAACATGCCCTTGATCCTAAATACGCTTCAACCTG
CGGGGTTAATCTGGATGAGCTTTTAATATCTCAGCCGGATACCGGTGAGGAAGCGCTTGGTATTGCCGAAGAGTTGGTGA
GAAGCACCGCCATAGGGGTTATAGTGATTGACAGTGTGGCAGCGCTGGTACCCAAAGCCGAAATAGAAGGCGACATGGGT
GACTCACATGTAGGTTTGCAGGCCAGACTTATGTCTCAGGCACTGCGGAAATTGACCTCTTCCATCGGGCAAACCAGAAC
GGCCGTTATCTTTATAAACCAGTTGAGAGAAAAAGTGGGTGTCATGTTCGGCAATCCCGAAGTCACCCCCGGCGGCCGGG
CGCTTAAATTTTACAGTTCGGTGCGTATAGATCTAAGGCGCATAGAAACCATCAAGCAGGGCACCATAGCAGTTGGTACA
CGCGTAAGAGCCAAAGTGGTAAAAAACAAGGTTGCTCCTCCTTTCAGGACAGCCGAGTTTGATATCATGTTTGACTCTGG
TATCAGCCGCGAGGGCAACCTTATTGATTTGGGCGTAACCAGTGAAGTTATAAGGAAAGCAGGGGCTTTCTTTTCCTACG
GTGACATTCGCCTGGGGCAAGGCAGAGAGAGCGCCAAAAACTATCTGGCGGCAAATCCAGATCTGGCGCAGGAAATTGAA
GAAAAAATACGTGCCTCAGCAGTCACCCTTTGCAGTATTGGCGATGGCGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: A0A0C6EX13

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	62.848	95.846	0.602
recA	Bacillus subtilis subsp. subtilis str. 168	63.043	95.549	0.602
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae MS11	60.308	96.439	0.582
recA	Neisseria gonorrhoeae strain FA1090	60.308	96.439	0.582
recA	Streptococcus mitis NCTC 12261	60	96.439	0.579
recA	Streptococcus mitis SK321	60	96.439	0.579
recA	Streptococcus pneumoniae R6	59.509	96.736	0.576
recA	Streptococcus pneumoniae Rx1	59.509	96.736	0.576
recA	Streptococcus pneumoniae D39	59.509	96.736	0.576
recA	Streptococcus pneumoniae TIGR4	59.509	96.736	0.576
recA	Pseudomonas stutzeri DSM 10701	59.692	96.439	0.576
recA	Streptococcus pyogenes NZ131	59.692	96.439	0.576
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.568	96.142	0.573
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.021	97.033	0.573
recA	Lactococcus lactis subsp. cremoris KW2	58.716	97.033	0.57
recA	Vibrio cholerae strain A1552	59.259	96.142	0.57
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.259	96.142	0.57
recA	Glaesserella parasuis strain SC1401	59.502	95.252	0.567
recA	Ralstonia pseudosolanacearum GMI1000	61.812	91.691	0.567
recA	Streptococcus mutans UA159	58.462	96.439	0.564
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	57.798	97.033	0.561
recA	Helicobacter pylori strain NCTC11637	58.333	96.142	0.561
recA	Helicobacter pylori 26695	58.333	96.142	0.561
recA	Acinetobacter baylyi ADP1	56.325	98.516	0.555
recA	Acinetobacter baumannii D1279779	55.689	99.11	0.552