Detailed information NTG0063268

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: SPICUR_RS04020
• Genome accession: NC_022664
• Coordinates: 804498..805541 (+)
• Length: 347 a.a.
• NCBI ID: WP_023366306.1
• Uniprot ID: U5T0P6
• Organism: Spiribacter curvatus
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 799498..810541

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPICUR_RS03980 (SPICUR_04000)	-	800003..800275 (-)	273	WP_237220352.1	HlyU family transcriptional regulator	-
SPICUR_RS03985 (SPICUR_04005)	-	800350..800931 (+)	582	WP_051373236.1	class I SAM-dependent methyltransferase	-
SPICUR_RS03990 (SPICUR_04010)	-	800895..802073 (-)	1179	WP_023366294.1	CynX/NimT family MFS transporter	-
SPICUR_RS09980 (SPICUR_04015)	-	802124..802372 (+)	249	WP_158499827.1	hypothetical protein	-
SPICUR_RS09985 (SPICUR_04020)	-	802377..802628 (+)	252	WP_023366298.1	DUF2249 domain-containing protein	-
SPICUR_RS04005 (SPICUR_04025)	-	802647..803405 (+)	759	WP_023366300.1	VIT1/CCC1 transporter family protein	-
SPICUR_RS04010 (SPICUR_04030)	-	803425..803892 (+)	468	WP_023366302.1	universal stress protein	-
SPICUR_RS04015 (SPICUR_04035)	-	803900..804403 (+)	504	WP_023366304.1	CinA family protein	-
SPICUR_RS04020 (SPICUR_04040)	recA	804498..805541 (+)	1044	WP_023366306.1	recombinase RecA	Machinery gene
SPICUR_RS04025 (SPICUR_04045)	-	805547..806032 (+)	486	WP_023366308.1	regulatory protein RecX	-
SPICUR_RS04030 (SPICUR_04050)	alaS	806045..808648 (+)	2604	WP_023366310.1	alanine--tRNA ligase	-
SPICUR_RS04035 (SPICUR_04055)	-	808661..809935 (+)	1275	WP_023366312.1	aspartate kinase	-
SPICUR_RS04040 (SPICUR_04060)	csrA	810094..810300 (+)	207	WP_023366314.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 37026.04 Da
• Isoelectric Point: 4.8122

>NTDB_id=63268 SPICUR_RS04020 WP_023366306.1 804498..805541(+) (recA) [Spiribacter curvatus]
MDEDRKKALGAALGQIEKQFGKGAVMRMGDARAVGNIPVISTGSLALDVALGIGGIPRGRVVEIYGPESSGKTTLTLQAI
AEAQRAGGTAAFVDAEHALDPEYAGKLGVDVDELLVSQPDTGEQALEIADMLVRSSAVDIVVVDSVAALTPKAEIEGEMG
DSHVGLQARLMSQALRKLTANIKRSNTTVVFINQIRMKIGVMFGSPETTTGGNALKFYSSLRMDIRRIGAIKKGDEVIGN
ETRVKVVKNKMAPPFRQAEFEILYGEGISREGELIDLGAKNGIVDKSGAWYSYNGDRIGQGKDNVRNFLKEHPEMTDAID
QALRQKLLDLPADDETSAEAEEGGANA

Nucleotide

• Length: 1044 bp

>NTDB_id=63268 SPICUR_RS04020 WP_023366306.1 804498..805541(+) (recA) [Spiribacter curvatus]
ATGGACGAAGATCGCAAGAAGGCACTGGGCGCGGCCCTCGGCCAGATTGAAAAGCAGTTCGGGAAGGGCGCGGTCATGCG
CATGGGTGACGCCCGGGCTGTCGGCAATATACCGGTCATTTCCACTGGCTCGCTGGCGCTCGACGTGGCGTTGGGAATTG
GCGGGATTCCCCGCGGCCGGGTCGTTGAAATCTATGGGCCAGAGTCGTCCGGCAAGACCACGCTCACGCTGCAGGCGATC
GCCGAAGCGCAGCGGGCGGGCGGAACCGCCGCGTTCGTTGACGCCGAGCATGCGCTCGATCCGGAGTACGCCGGTAAACT
CGGAGTCGATGTCGACGAGCTGCTGGTCTCGCAGCCGGACACGGGTGAGCAGGCGCTCGAAATCGCCGATATGCTGGTGC
GCTCGAGCGCGGTGGATATCGTCGTGGTCGACTCAGTAGCGGCCCTGACGCCCAAGGCGGAAATCGAAGGCGAGATGGGT
GACTCGCACGTCGGGCTGCAGGCACGGCTCATGTCCCAGGCCCTTCGTAAGCTCACGGCAAACATCAAGCGCTCCAACAC
AACGGTCGTTTTCATCAACCAGATCCGCATGAAGATCGGTGTGATGTTTGGCAGCCCCGAGACCACTACGGGCGGCAACG
CGCTCAAGTTCTACTCCTCCCTGCGGATGGACATTCGGCGTATCGGGGCGATCAAGAAAGGTGATGAGGTCATCGGCAAC
GAGACCCGCGTCAAGGTCGTCAAGAACAAAATGGCACCTCCTTTCCGTCAGGCCGAGTTCGAGATCCTCTACGGCGAGGG
CATCTCCCGTGAGGGCGAGCTGATCGATCTCGGCGCGAAAAACGGTATCGTCGATAAGTCCGGTGCGTGGTACAGCTACA
ACGGCGATCGTATCGGTCAGGGCAAGGACAATGTCCGCAACTTCCTCAAAGAGCATCCGGAGATGACCGACGCCATCGAT
CAGGCGCTGCGCCAGAAACTCCTCGATCTGCCCGCTGATGACGAGACGTCCGCCGAGGCGGAAGAGGGTGGGGCGAACGC
CTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

3D structure

• AlphaFold DB: U5T0P6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	74.269	98.559	0.732
recA	Neisseria gonorrhoeae strain FA1090	75.617	93.372	0.706
recA	Neisseria gonorrhoeae MS11	75.617	93.372	0.706
recA	Neisseria gonorrhoeae MS11	75.617	93.372	0.706
recA	Vibrio cholerae strain A1552	69.714	100	0.703
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.714	100	0.703
recA	Acinetobacter baylyi ADP1	71.261	98.271	0.7
recA	Ralstonia pseudosolanacearum GMI1000	72.783	94.236	0.686
recA	Acinetobacter baumannii D1279779	69.006	98.559	0.68
recA	Glaesserella parasuis strain SC1401	69.301	94.813	0.657
recA	Helicobacter pylori strain NCTC11637	62.139	99.712	0.62
recA	Bacillus subtilis subsp. subtilis str. 168	66.46	92.795	0.617
recA	Helicobacter pylori 26695	61.85	99.712	0.617
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.939	94.524	0.614
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.35	95.389	0.614
recA	Streptococcus mutans UA159	63.497	93.948	0.597
recA	Latilactobacillus sakei subsp. sakei 23K	60.234	98.559	0.594
recA	Streptococcus pyogenes NZ131	61.702	94.813	0.585
recA	Streptococcus pneumoniae R6	61.28	94.524	0.579
recA	Streptococcus pneumoniae Rx1	61.28	94.524	0.579
recA	Streptococcus pneumoniae D39	61.28	94.524	0.579
recA	Streptococcus pneumoniae TIGR4	61.28	94.524	0.579
recA	Lactococcus lactis subsp. cremoris KW2	59.94	95.677	0.573
recA	Streptococcus mitis NCTC 12261	60.615	93.66	0.568
recA	Streptococcus mitis SK321	60.308	93.66	0.565
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.716	94.236	0.553