Detailed information NTG0631753

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: LP107_RS02090
• Genome accession: NZ_CP087840
• Coordinates: 413011..414069 (-)
• Length: 352 a.a.
• NCBI ID: WP_078275069.1
• Uniprot ID: -
• Organism: Moraxella bovis strain SAM58116
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Genomic island	406195..423644	413011..414069	within	0

Gene organization within MGE regions

Location: 406195..423644

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LP107_RS02060 (LP107_02050)	-	406195..406956 (-)	762	WP_208624034.1	integrase core domain-containing protein	-
LP107_RS02065 (LP107_02055)	-	407034..407733 (+)	700	WP_228157684.1	IS1 family transposase	-
LP107_RS02070 (LP107_02060)	lptF	407930..409216 (+)	1287	WP_112741784.1	LPS export ABC transporter permease LptF	-
LP107_RS02075 (LP107_02065)	lptG	409213..410301 (+)	1089	WP_112741785.1	LPS export ABC transporter permease LptG	-
LP107_RS02080 (LP107_02070)	hemA	410682..412016 (+)	1335	WP_078275065.1	glutamyl-tRNA reductase	-
LP107_RS02085 (LP107_02075)	-	412038..413006 (-)	969	WP_158079708.1	regulatory protein RecX	-
LP107_RS02090 (LP107_02080)	recA	413011..414069 (-)	1059	WP_078275069.1	recombinase RecA	Machinery gene
LP107_RS02095 (LP107_02085)	yaaA	414260..415042 (-)	783	WP_112741786.1	peroxide stress protein YaaA	-
LP107_RS02100 (LP107_02090)	-	415185..416255 (+)	1071	WP_078275062.1	enoyl-CoA hydratase/isomerase family protein	-
LP107_RS02105 (LP107_02095)	-	416790..418367 (-)	1578	WP_264675988.1	reverse transcriptase domain-containing protein	-
LP107_RS02110 (LP107_02100)	-	418712..420250 (-)	1539	WP_112741788.1	catalase	-
LP107_RS02115 (LP107_02105)	-	420551..421294 (-)	744	WP_228144857.1	epoxyqueuosine reductase QueH	-
LP107_RS02120 (LP107_02110)	iscX	421390..421590 (+)	201	WP_029103819.1	Fe-S cluster assembly protein IscX	-
LP107_RS02125 (LP107_02115)	-	421577..421786 (+)	210	WP_078275059.1	hypothetical protein	-
LP107_RS02130 (LP107_02120)	-	421789..422637 (-)	849	WP_078275058.1	SPFH domain-containing protein	-
LP107_RS02135 (LP107_02125)	-	422759..423208 (-)	450	WP_078275057.1	NfeD family protein	-
LP107_RS02140 (LP107_02130)	-	423354..423644 (+)	291	WP_264682804.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37863.60 Da
• Isoelectric Point: 4.8055

>NTDB_id=631753 LP107_RS02090 WP_078275069.1 413011..414069(-) (recA) [Moraxella bovis strain SAM58116]
MEGNKEKALQMALAQIEKAFGKNTIMNLGDESIKVDVETISTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLQAI
AECQKQGGKCAFIDAEHALDPIYAKKLGVNLNELMVSQPDNGEQALEIVDMLVRSGAVDLIVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDKEEIIGS
ETRVKVIKNKMAPPFRQTEFDIMYGEGINRLGEIVDIGASLDIVGKSGAWYSYEGSKIGQGKANACQFLAENPAIAQEIK
AKIRELKLANVVPVAPSDDDGEVPEYVEGMDD

Nucleotide

• Length: 1059 bp

>NTDB_id=631753 LP107_RS02090 WP_078275069.1 413011..414069(-) (recA) [Moraxella bovis strain SAM58116]
ATTGAAGGCAACAAAGAAAAAGCGTTGCAAATGGCATTGGCTCAGATTGAAAAGGCATTCGGCAAAAACACCATCATGAA
TCTGGGCGATGAGTCTATCAAGGTAGATGTTGAGACCATTTCCACAGGCTCGCTTGGGCTTGACATTGCTCTGGGGATTG
GCGGTTTGCCAAAGGGGCGTATCATTGAAATTTTCGGGCCTGAAAGCTCGGGCAAAACCACGCTCACCCTACAAGCGATT
GCCGAATGCCAAAAACAAGGCGGAAAATGTGCGTTCATTGACGCAGAACATGCCCTAGACCCCATTTATGCCAAAAAATT
GGGTGTAAATTTGAACGAACTTATGGTATCTCAGCCCGACAACGGCGAGCAAGCCCTTGAAATCGTGGACATGCTTGTGC
GTTCTGGGGCGGTGGATTTGATTGTGGTGGACTCGGTTGCTGCCTTGACCCCAAAAGCTGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTCTGATGAGCCAAGCCTTGCGTAAAATCACGGGTAACGCCAAACGCTCTAACTG
CATGGTGATTTTTATCAACCAAATCCGCATGAAAATCGGCGTAATGTTCGGCTCGCCTGAGACGACAACAGGCGGTAACG
CCCTAAAATTCTATGCCTCTGTCCGCCTAGACATTCGCCGTATCGGCTCGGTCAAGGACAAAGAAGAAATCATCGGTTCT
GAAACCCGTGTCAAGGTCATCAAAAACAAAATGGCTCCCCCGTTCCGCCAAACCGAATTTGACATCATGTATGGCGAGGG
CATTAACCGCTTGGGTGAGATTGTGGACATCGGGGCAAGCCTTGACATCGTGGGTAAATCAGGGGCATGGTACAGCTATG
AAGGCTCAAAAATCGGTCAAGGCAAAGCCAATGCCTGTCAATTTTTGGCGGAAAATCCAGCCATCGCCCAAGAGATTAAA
GCCAAAATCCGTGAGCTAAAACTTGCCAATGTCGTGCCAGTCGCCCCCAGCGATGATGACGGTGAAGTGCCTGAATATGT
CGAAGGCATGGACGACTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	75.072	99.148	0.744
recA	Acinetobacter baumannii D1279779	74.928	98.58	0.739
recA	Vibrio cholerae O1 biovar El Tor strain E7946	69.688	100	0.699
recA	Vibrio cholerae strain A1552	69.688	100	0.699
recA	Neisseria gonorrhoeae strain FA1090	69.164	98.58	0.682
recA	Neisseria gonorrhoeae MS11	69.164	98.58	0.682
recA	Neisseria gonorrhoeae MS11	69.164	98.58	0.682
recA	Pseudomonas stutzeri DSM 10701	73.765	92.045	0.679
recA	Glaesserella parasuis strain SC1401	68.195	99.148	0.676
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	65.889	97.443	0.642
recA	Ralstonia pseudosolanacearum GMI1000	70.968	88.068	0.625
recA	Helicobacter pylori 26695	66.873	91.761	0.614
recA	Helicobacter pylori strain NCTC11637	66.563	91.761	0.611
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.443	92.898	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	65.528	91.477	0.599
recA	Streptococcus pneumoniae D39	61.111	92.045	0.562
recA	Streptococcus pneumoniae Rx1	61.111	92.045	0.562
recA	Streptococcus pneumoniae R6	61.111	92.045	0.562
recA	Streptococcus pneumoniae TIGR4	61.111	92.045	0.562
recA	Streptococcus mitis NCTC 12261	60.802	92.045	0.56
recA	Streptococcus pyogenes NZ131	60.802	92.045	0.56
recA	Streptococcus mitis SK321	60.494	92.045	0.557
recA	Streptococcus mutans UA159	60.185	92.045	0.554
recA	Lactococcus lactis subsp. cremoris KW2	58.896	92.614	0.545
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60	90.909	0.545
recA	Latilactobacillus sakei subsp. sakei 23K	59.375	90.909	0.54