Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | LP119_RS11425 | Genome accession | NZ_CP087805 |
| Coordinates | 2261386..2262444 (+) | Length | 352 a.a. |
| NCBI ID | WP_272506423.1 | Uniprot ID | - |
| Organism | Moraxella bovis strain SAM57942 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 2251490..2282252 | 2261386..2262444 | within | 0 |
Gene organization within MGE regions
Location: 2251490..2282252
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP119_RS11375 (LP119_11315) | - | 2251490..2251735 (-) | 246 | WP_264695190.1 | hypothetical protein | - |
| LP119_RS11380 (LP119_11320) | - | 2251888..2252337 (+) | 450 | WP_264683870.1 | NfeD family protein | - |
| LP119_RS11385 (LP119_11325) | - | 2252459..2253307 (+) | 849 | WP_078275058.1 | SPFH domain-containing protein | - |
| LP119_RS11390 (LP119_11330) | iscX | 2253494..2253694 (-) | 201 | WP_264677341.1 | Fe-S cluster assembly protein IscX | - |
| LP119_RS11395 (LP119_11335) | - | 2253790..2254533 (+) | 744 | WP_228144857.1 | epoxyqueuosine reductase QueH | - |
| LP119_RS11400 (LP119_11340) | - | 2254713..2254856 (+) | 144 | WP_156892306.1 | hypothetical protein | - |
| LP119_RS11405 (LP119_11345) | - | 2255224..2256765 (+) | 1542 | WP_264697642.1 | catalase | - |
| LP119_RS11410 (LP119_11350) | - | 2257213..2258664 (+) | 1452 | WP_264689188.1 | reverse transcriptase domain-containing protein | - |
| LP119_RS11415 (LP119_11355) | - | 2259199..2260269 (-) | 1071 | WP_264684254.1 | enoyl-CoA hydratase/isomerase family protein | - |
| LP119_RS11420 (LP119_11360) | yaaA | 2260413..2261195 (+) | 783 | WP_264684255.1 | peroxide stress protein YaaA | - |
| LP119_RS11425 (LP119_11365) | recA | 2261386..2262444 (+) | 1059 | WP_272506423.1 | recombinase RecA | Machinery gene |
| LP119_RS11430 (LP119_11370) | - | 2262449..2263417 (+) | 969 | WP_264684256.1 | RecX family transcriptional regulator | - |
| LP119_RS11435 (LP119_11375) | hemA | 2263439..2264773 (-) | 1335 | WP_264690157.1 | glutamyl-tRNA reductase | - |
| LP119_RS11440 (LP119_11380) | lptG | 2265154..2266242 (-) | 1089 | WP_264689186.1 | LPS export ABC transporter permease LptG | - |
| LP119_RS11445 (LP119_11385) | lptF | 2266239..2267525 (-) | 1287 | WP_264689184.1 | LPS export ABC transporter permease LptF | - |
| LP119_RS11450 (LP119_11390) | - | 2267722..2268352 (-) | 631 | Protein_2240 | IS1 family transposase | - |
| LP119_RS11455 (LP119_11395) | - | 2268499..2269260 (+) | 762 | WP_264677286.1 | integrase core domain-containing protein | - |
| LP119_RS11460 (LP119_11400) | - | 2269728..2269934 (+) | 207 | WP_264677349.1 | hypothetical protein | - |
| LP119_RS11465 (LP119_11405) | - | 2269944..2271734 (+) | 1791 | WP_264677350.1 | hypothetical protein | - |
| LP119_RS11470 (LP119_11410) | - | 2271731..2272363 (+) | 633 | WP_264677351.1 | hypothetical protein | - |
| LP119_RS11475 (LP119_11415) | - | 2272445..2273095 (+) | 651 | WP_264677352.1 | hypothetical protein | - |
| LP119_RS11480 (LP119_11420) | tssH | 2273245..2275896 (+) | 2652 | WP_264697646.1 | type VI secretion system ATPase TssH | - |
| LP119_RS11485 (LP119_11425) | - | 2275887..2276546 (+) | 660 | WP_264683867.1 | PAAR domain-containing protein | - |
| LP119_RS11490 (LP119_11430) | - | 2276750..2276944 (-) | 195 | Protein_2248 | IS30 family transposase | - |
| LP119_RS11495 (LP119_11435) | - | 2276934..2277266 (-) | 333 | WP_264683866.1 | hypothetical protein | - |
| LP119_RS11500 (LP119_11440) | - | 2277302..2277595 (-) | 294 | WP_272506279.1 | transposase | - |
| LP119_RS11505 (LP119_11445) | - | 2277579..2277896 (+) | 318 | WP_264683865.1 | hypothetical protein | - |
| LP119_RS11510 (LP119_11450) | - | 2277841..2278281 (+) | 441 | WP_264677579.1 | IS30 family transposase | - |
| LP119_RS11515 (LP119_11455) | - | 2278725..2279633 (-) | 909 | WP_264683864.1 | hypothetical protein | - |
| LP119_RS11520 (LP119_11460) | - | 2281005..2281277 (+) | 273 | WP_112742658.1 | hypothetical protein | - |
| LP119_RS11525 (LP119_11465) | - | 2281552..2282183 (-) | 632 | Protein_2255 | IS1 family transposase | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37849.57 Da Isoelectric Point: 4.8055
>NTDB_id=631549 LP119_RS11425 WP_272506423.1 2261386..2262444(+) (recA) [Moraxella bovis strain SAM57942]
MEGNKEKALQMALAQIEKAFGKNTIMNLGDESIKVDVETISTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLQAI
AECQKQGGKCAFIDAEHALDPIYAKKLGVNLNELMVSQPDNGEQALEIVDMLVRSGAVDLIVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDKEEVIGS
ETRVKVIKNKMAPPFRQTEFDIMYGEGINRLGEIVDIGASLDIVGKSGAWYSYEGSKIGQGKANACQFLAENPAIAQEIK
AKIRELKLANVVPVAPSDDDGEVPEYVEGMDD
MEGNKEKALQMALAQIEKAFGKNTIMNLGDESIKVDVETISTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLQAI
AECQKQGGKCAFIDAEHALDPIYAKKLGVNLNELMVSQPDNGEQALEIVDMLVRSGAVDLIVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDKEEVIGS
ETRVKVIKNKMAPPFRQTEFDIMYGEGINRLGEIVDIGASLDIVGKSGAWYSYEGSKIGQGKANACQFLAENPAIAQEIK
AKIRELKLANVVPVAPSDDDGEVPEYVEGMDD
Nucleotide
Download Length: 1059 bp
>NTDB_id=631549 LP119_RS11425 WP_272506423.1 2261386..2262444(+) (recA) [Moraxella bovis strain SAM57942]
ATTGAAGGCAACAAAGAAAAAGCGTTGCAAATGGCATTGGCTCAGATTGAAAAGGCGTTCGGCAAAAACACCATCATGAA
TCTGGGCGATGAGTCTATCAAGGTAGATGTTGAGACCATTTCCACAGGCTCGCTTGGGCTTGACATTGCTCTGGGGATTG
GCGGTTTGCCAAAGGGGCGCATCATTGAAATTTTCGGGCCTGAAAGCTCGGGCAAAACCACGCTCACCCTACAAGCGATT
GCCGAATGCCAAAAACAAGGCGGAAAATGTGCGTTCATTGACGCAGAACATGCCCTAGACCCCATTTATGCCAAAAAATT
GGGTGTAAATTTGAACGAACTTATGGTATCTCAGCCCGACAACGGCGAGCAAGCCCTTGAAATCGTGGACATGCTTGTGC
GTTCTGGGGCGGTGGATTTGATTGTGGTGGACTCGGTTGCTGCCTTGACCCCAAAAGCTGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTCTGATGAGCCAAGCCTTGCGTAAAATCACGGGTAACGCCAAACGCTCTAACTG
CATGGTGATTTTTATCAACCAAATCCGCATGAAAATCGGCGTAATGTTCGGCTCGCCTGAGACGACAACAGGCGGTAACG
CCCTAAAATTCTATGCCTCTGTCCGCCTAGACATTCGCCGTATCGGCTCGGTCAAGGACAAAGAAGAAGTCATCGGTTCT
GAAACCCGTGTCAAGGTCATCAAAAACAAAATGGCTCCCCCGTTCCGCCAAACCGAATTTGACATCATGTATGGCGAGGG
CATTAACCGCTTGGGTGAGATTGTGGACATCGGGGCAAGCCTTGACATCGTGGGTAAATCAGGGGCATGGTACAGCTATG
AAGGCTCAAAAATCGGTCAAGGCAAAGCCAATGCCTGTCAATTTTTGGCGGAAAATCCAGCCATCGCCCAAGAGATTAAA
GCCAAAATCCGTGAGCTAAAACTTGCCAACGTCGTGCCAGTCGCCCCCAGCGATGATGACGGTGAAGTGCCTGAATATGT
CGAAGGCATGGACGACTAA
ATTGAAGGCAACAAAGAAAAAGCGTTGCAAATGGCATTGGCTCAGATTGAAAAGGCGTTCGGCAAAAACACCATCATGAA
TCTGGGCGATGAGTCTATCAAGGTAGATGTTGAGACCATTTCCACAGGCTCGCTTGGGCTTGACATTGCTCTGGGGATTG
GCGGTTTGCCAAAGGGGCGCATCATTGAAATTTTCGGGCCTGAAAGCTCGGGCAAAACCACGCTCACCCTACAAGCGATT
GCCGAATGCCAAAAACAAGGCGGAAAATGTGCGTTCATTGACGCAGAACATGCCCTAGACCCCATTTATGCCAAAAAATT
GGGTGTAAATTTGAACGAACTTATGGTATCTCAGCCCGACAACGGCGAGCAAGCCCTTGAAATCGTGGACATGCTTGTGC
GTTCTGGGGCGGTGGATTTGATTGTGGTGGACTCGGTTGCTGCCTTGACCCCAAAAGCTGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTCTGATGAGCCAAGCCTTGCGTAAAATCACGGGTAACGCCAAACGCTCTAACTG
CATGGTGATTTTTATCAACCAAATCCGCATGAAAATCGGCGTAATGTTCGGCTCGCCTGAGACGACAACAGGCGGTAACG
CCCTAAAATTCTATGCCTCTGTCCGCCTAGACATTCGCCGTATCGGCTCGGTCAAGGACAAAGAAGAAGTCATCGGTTCT
GAAACCCGTGTCAAGGTCATCAAAAACAAAATGGCTCCCCCGTTCCGCCAAACCGAATTTGACATCATGTATGGCGAGGG
CATTAACCGCTTGGGTGAGATTGTGGACATCGGGGCAAGCCTTGACATCGTGGGTAAATCAGGGGCATGGTACAGCTATG
AAGGCTCAAAAATCGGTCAAGGCAAAGCCAATGCCTGTCAATTTTTGGCGGAAAATCCAGCCATCGCCCAAGAGATTAAA
GCCAAAATCCGTGAGCTAAAACTTGCCAACGTCGTGCCAGTCGCCCCCAGCGATGATGACGGTGAAGTGCCTGAATATGT
CGAAGGCATGGACGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.