Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | LP101_RS01525 | Genome accession | NZ_CP087796 |
| Coordinates | 336783..337841 (-) | Length | 352 a.a. |
| NCBI ID | WP_272506423.1 | Uniprot ID | - |
| Organism | Moraxella bovis strain SAM57957 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 320971..347863 | 336783..337841 | within | 0 |
Gene organization within MGE regions
Location: 320971..347863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP101_RS01450 (LP101_01420) | - | 320998..321330 (+) | 333 | WP_264683866.1 | hypothetical protein | - |
| LP101_RS01455 (LP101_01425) | - | 321320..321514 (+) | 195 | Protein_281 | IS30 family transposase | - |
| LP101_RS01460 (LP101_01430) | - | 321718..322377 (-) | 660 | WP_264683867.1 | PAAR domain-containing protein | - |
| LP101_RS01465 (LP101_01435) | tssH | 322368..325019 (-) | 2652 | WP_264683868.1 | type VI secretion system ATPase TssH | - |
| LP101_RS01470 (LP101_01440) | - | 325169..325819 (-) | 651 | WP_264677352.1 | hypothetical protein | - |
| LP101_RS01475 (LP101_01445) | - | 325901..326533 (-) | 633 | WP_264677351.1 | hypothetical protein | - |
| LP101_RS01480 (LP101_01450) | - | 326530..328320 (-) | 1791 | WP_264677350.1 | hypothetical protein | - |
| LP101_RS01485 (LP101_01455) | - | 328330..328536 (-) | 207 | WP_264677349.1 | hypothetical protein | - |
| LP101_RS01490 (LP101_01460) | - | 329004..329765 (-) | 762 | WP_264677224.1 | integrase core domain-containing protein | - |
| LP101_RS01495 (LP101_01465) | - | 329912..330543 (+) | 632 | Protein_289 | IS1 family transposase | - |
| LP101_RS01500 (LP101_01470) | lptF | 330740..332026 (+) | 1287 | WP_264677348.1 | LPS export ABC transporter permease LptF | - |
| LP101_RS01505 (LP101_01475) | lptG | 332023..333111 (+) | 1089 | WP_112741785.1 | LPS export ABC transporter permease LptG | - |
| LP101_RS13245 | - | 333256..333624 (+) | 369 | WP_272506256.1 | IS630 transposase-related protein | - |
| LP101_RS13250 | - | 333678..334163 (+) | 486 | WP_276001571.1 | transposase | - |
| LP101_RS01515 (LP101_01485) | hemA | 334454..335788 (+) | 1335 | WP_264677347.1 | glutamyl-tRNA reductase | - |
| LP101_RS01520 (LP101_01490) | - | 335810..336778 (-) | 969 | WP_264677346.1 | RecX family transcriptional regulator | - |
| LP101_RS01525 (LP101_01495) | recA | 336783..337841 (-) | 1059 | WP_272506423.1 | recombinase RecA | Machinery gene |
| LP101_RS01530 (LP101_01500) | yaaA | 338032..338814 (-) | 783 | WP_264677344.1 | peroxide stress protein YaaA | - |
| LP101_RS01535 (LP101_01505) | - | 338958..340028 (+) | 1071 | WP_264677343.1 | enoyl-CoA hydratase/isomerase family protein | - |
| LP101_RS01540 (LP101_01510) | - | 340561..342138 (-) | 1578 | WP_264683869.1 | reverse transcriptase domain-containing protein | - |
| LP101_RS01545 (LP101_01515) | - | 342464..344004 (-) | 1541 | Protein_300 | catalase | - |
| LP101_RS01550 (LP101_01520) | - | 344372..344515 (-) | 144 | WP_156892306.1 | hypothetical protein | - |
| LP101_RS01555 (LP101_01525) | - | 344695..345438 (-) | 744 | WP_228144857.1 | epoxyqueuosine reductase QueH | - |
| LP101_RS01560 (LP101_01530) | iscX | 345534..345734 (+) | 201 | WP_264677341.1 | Fe-S cluster assembly protein IscX | - |
| LP101_RS01565 (LP101_01535) | - | 345921..346769 (-) | 849 | WP_078275058.1 | SPFH domain-containing protein | - |
| LP101_RS01570 (LP101_01540) | - | 346891..347340 (-) | 450 | WP_264683870.1 | NfeD family protein | - |
| LP101_RS01575 (LP101_01545) | - | 347486..347863 (+) | 378 | WP_264683872.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37849.57 Da Isoelectric Point: 4.8055
>NTDB_id=631460 LP101_RS01525 WP_272506423.1 336783..337841(-) (recA) [Moraxella bovis strain SAM57957]
MEGNKEKALQMALAQIEKAFGKNTIMNLGDESIKVDVETISTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLQAI
AECQKQGGKCAFIDAEHALDPIYAKKLGVNLNELMVSQPDNGEQALEIVDMLVRSGAVDLIVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDKEEVIGS
ETRVKVIKNKMAPPFRQTEFDIMYGEGINRLGEIVDIGASLDIVGKSGAWYSYEGSKIGQGKANACQFLAENPAIAQEIK
AKIRELKLANVVPVAPSDDDGEVPEYVEGMDD
MEGNKEKALQMALAQIEKAFGKNTIMNLGDESIKVDVETISTGSLGLDIALGIGGLPKGRIIEIFGPESSGKTTLTLQAI
AECQKQGGKCAFIDAEHALDPIYAKKLGVNLNELMVSQPDNGEQALEIVDMLVRSGAVDLIVVDSVAALTPKAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSVKDKEEVIGS
ETRVKVIKNKMAPPFRQTEFDIMYGEGINRLGEIVDIGASLDIVGKSGAWYSYEGSKIGQGKANACQFLAENPAIAQEIK
AKIRELKLANVVPVAPSDDDGEVPEYVEGMDD
Nucleotide
Download Length: 1059 bp
>NTDB_id=631460 LP101_RS01525 WP_272506423.1 336783..337841(-) (recA) [Moraxella bovis strain SAM57957]
ATTGAAGGCAACAAAGAAAAAGCGTTGCAAATGGCATTGGCTCAGATTGAAAAGGCGTTCGGCAAAAACACCATCATGAA
TCTGGGCGATGAGTCTATCAAGGTAGATGTTGAGACCATTTCCACAGGCTCGCTTGGGCTTGACATTGCTCTGGGGATTG
GCGGTTTGCCAAAGGGGCGCATCATTGAAATTTTCGGGCCTGAAAGCTCGGGCAAAACCACGCTCACCCTACAAGCGATT
GCCGAATGCCAAAAACAAGGCGGAAAATGTGCGTTCATTGACGCAGAACATGCCCTAGACCCCATTTATGCCAAAAAATT
GGGTGTAAATTTGAACGAACTTATGGTATCTCAGCCCGACAACGGCGAGCAAGCCCTTGAAATCGTGGACATGCTTGTGC
GTTCTGGGGCGGTGGATTTGATTGTGGTGGACTCGGTTGCTGCCTTGACCCCAAAAGCTGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTCTGATGAGCCAAGCCTTGCGTAAAATCACGGGTAACGCCAAACGCTCTAACTG
CATGGTGATTTTTATCAACCAAATCCGCATGAAAATCGGCGTAATGTTCGGCTCGCCTGAGACGACAACAGGCGGTAACG
CCCTAAAATTCTATGCCTCTGTCCGCCTAGACATTCGCCGTATCGGCTCGGTCAAGGACAAAGAAGAAGTCATCGGTTCT
GAAACCCGTGTCAAGGTCATCAAAAACAAAATGGCTCCCCCGTTCCGCCAAACCGAATTTGACATCATGTATGGCGAGGG
CATTAACCGCTTGGGTGAGATTGTGGACATCGGGGCAAGCCTTGACATCGTGGGTAAATCAGGGGCATGGTACAGCTATG
AAGGCTCAAAAATCGGTCAAGGCAAAGCCAATGCCTGTCAATTTTTGGCGGAAAATCCAGCCATCGCCCAAGAGATTAAA
GCCAAAATCCGTGAGCTAAAACTTGCCAACGTCGTGCCAGTCGCCCCCAGCGATGATGACGGTGAAGTGCCTGAATATGT
CGAAGGCATGGACGACTAA
ATTGAAGGCAACAAAGAAAAAGCGTTGCAAATGGCATTGGCTCAGATTGAAAAGGCGTTCGGCAAAAACACCATCATGAA
TCTGGGCGATGAGTCTATCAAGGTAGATGTTGAGACCATTTCCACAGGCTCGCTTGGGCTTGACATTGCTCTGGGGATTG
GCGGTTTGCCAAAGGGGCGCATCATTGAAATTTTCGGGCCTGAAAGCTCGGGCAAAACCACGCTCACCCTACAAGCGATT
GCCGAATGCCAAAAACAAGGCGGAAAATGTGCGTTCATTGACGCAGAACATGCCCTAGACCCCATTTATGCCAAAAAATT
GGGTGTAAATTTGAACGAACTTATGGTATCTCAGCCCGACAACGGCGAGCAAGCCCTTGAAATCGTGGACATGCTTGTGC
GTTCTGGGGCGGTGGATTTGATTGTGGTGGACTCGGTTGCTGCCTTGACCCCAAAAGCTGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTCTGATGAGCCAAGCCTTGCGTAAAATCACGGGTAACGCCAAACGCTCTAACTG
CATGGTGATTTTTATCAACCAAATCCGCATGAAAATCGGCGTAATGTTCGGCTCGCCTGAGACGACAACAGGCGGTAACG
CCCTAAAATTCTATGCCTCTGTCCGCCTAGACATTCGCCGTATCGGCTCGGTCAAGGACAAAGAAGAAGTCATCGGTTCT
GAAACCCGTGTCAAGGTCATCAAAAACAAAATGGCTCCCCCGTTCCGCCAAACCGAATTTGACATCATGTATGGCGAGGG
CATTAACCGCTTGGGTGAGATTGTGGACATCGGGGCAAGCCTTGACATCGTGGGTAAATCAGGGGCATGGTACAGCTATG
AAGGCTCAAAAATCGGTCAAGGCAAAGCCAATGCCTGTCAATTTTTGGCGGAAAATCCAGCCATCGCCCAAGAGATTAAA
GCCAAAATCCGTGAGCTAAAACTTGCCAACGTCGTGCCAGTCGCCCCCAGCGATGATGACGGTGAAGTGCCTGAATATGT
CGAAGGCATGGACGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.