Detailed information NTG0063089

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: Q783_RS02970
• Genome accession: NC_022606
• Coordinates: 616285..617331 (+)
• Length: 348 a.a.
• NCBI ID: WP_023177207.1
• Uniprot ID: U5S891
• Organism: Carnobacterium inhibens subsp. gilichinskyi
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 611285..622331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q783_RS02950 (Q783_02995)	ymfI	612304..613029 (+)	726	WP_023177200.1	elongation factor P 5-aminopentanone reductase	-
Q783_RS02955 (Q783_03000)	-	613139..613999 (+)	861	WP_023177201.1	helix-turn-helix domain-containing protein	-
Q783_RS02960 (Q783_03005)	pgsA	614089..614670 (+)	582	WP_023177203.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
Q783_RS02965 (Q783_03010)	-	614863..616146 (+)	1284	WP_023177205.1	competence/damage-inducible protein A	-
Q783_RS02970 (Q783_03015)	recA	616285..617331 (+)	1047	WP_023177207.1	recombinase RecA	Machinery gene
Q783_RS02975 (Q783_03020)	rny	617640..619199 (+)	1560	WP_023177208.1	ribonuclease Y	-
Q783_RS02980 (Q783_03025)	-	619383..620189 (+)	807	WP_023177210.1	TIGR00282 family metallophosphoesterase	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 37375.63 Da
• Isoelectric Point: 4.9950

>NTDB_id=63089 Q783_RS02970 WP_023177207.1 616285..617331(+) (recA) [Carnobacterium inhibens subsp. gilichinskyi]
MADDRKQALDAALKKIEKNFGKGSVMKLGEKVDTRISTVPSGSLALDVALGVGGFPRGRIIEVYGPESSGKTTVALHAVA
EVQKQGGIAAFIDAENALDPKYAAALGVDIDELLLSQPDTGEQGLEIADALVSSGAVDIVVIDSVAALVPRAEIEGEMGD
SHVGLQARLMSQALRKLSGSINKTKTIALFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQIKQGTDIMGNR
TKIKVVKNKVAPPFRVAEVDIMYGEGISQVGELVDMGSDKDIIDKSGAWYSYNGERIGQGRENVKKFFKENPELRAEVEQ
KVRAAYGFGEPGTEEATADSSEIDLLEK

Nucleotide

• Length: 1047 bp

>NTDB_id=63089 Q783_RS02970 WP_023177207.1 616285..617331(+) (recA) [Carnobacterium inhibens subsp. gilichinskyi]
ATGGCAGACGATCGTAAACAAGCATTAGACGCAGCGTTAAAAAAGATTGAAAAGAATTTTGGAAAAGGTTCTGTTATGAA
ACTAGGCGAAAAAGTTGATACACGTATTTCAACTGTTCCTAGTGGTTCACTAGCATTAGACGTAGCTTTAGGTGTAGGTG
GTTTTCCGCGTGGAAGAATCATCGAAGTATATGGTCCTGAAAGTTCAGGTAAAACTACAGTAGCTTTACATGCTGTTGCT
GAAGTTCAAAAACAAGGCGGAATTGCTGCTTTTATTGATGCAGAAAATGCATTAGATCCAAAATATGCAGCTGCTTTAGG
TGTAGACATAGATGAATTACTTTTATCTCAACCAGATACAGGTGAACAAGGATTAGAAATTGCAGATGCTTTAGTTTCCA
GTGGAGCAGTAGATATTGTAGTTATTGACTCAGTTGCTGCTTTAGTACCACGTGCAGAAATCGAAGGAGAAATGGGAGAC
TCTCATGTAGGTCTACAAGCCCGTTTGATGTCTCAAGCTTTGCGTAAATTATCTGGATCAATTAATAAGACAAAAACAAT
CGCTCTATTTATCAACCAAATTCGTGAAAAAGTCGGCGTGATGTTTGGTAATCCAGAAATTACCCCGGGTGGTCGTGCAC
TGAAATTCTACGCTACGATCCGATTAGAAGTTAGAAGAGCTGAACAAATCAAACAAGGTACAGATATTATGGGTAACCGT
ACAAAAATCAAAGTTGTAAAAAACAAAGTTGCTCCTCCTTTTAGAGTAGCTGAAGTAGATATCATGTATGGAGAAGGTAT
ATCTCAAGTTGGAGAACTGGTAGATATGGGTTCTGACAAAGATATTATTGATAAATCTGGAGCGTGGTACTCTTATAATG
GCGAACGAATTGGTCAAGGCCGAGAAAACGTCAAAAAATTCTTTAAGGAAAATCCTGAATTAAGAGCTGAAGTAGAACAA
AAAGTTCGTGCAGCTTATGGATTTGGTGAACCTGGCACTGAAGAAGCAACAGCAGACTCTTCTGAAATTGATTTATTAGA
AAAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-268)

3D structure

• AlphaFold DB: U5S891

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	78.841	99.138	0.782
recA	Bacillus subtilis subsp. subtilis str. 168	78.419	94.54	0.741
recA	Streptococcus mutans UA159	68.75	100	0.695
recA	Streptococcus pneumoniae TIGR4	66.205	100	0.687
recA	Streptococcus pneumoniae D39	66.205	100	0.687
recA	Streptococcus pneumoniae R6	66.205	100	0.687
recA	Streptococcus pneumoniae Rx1	66.205	100	0.687
recA	Streptococcus mitis SK321	68.3	99.713	0.681
recA	Streptococcus pyogenes NZ131	71.601	95.115	0.681
recA	Streptococcus mitis NCTC 12261	68.012	99.713	0.678
recA	Lactococcus lactis subsp. cremoris KW2	68.693	94.54	0.649
recA	Neisseria gonorrhoeae strain FA1090	62.974	98.563	0.621
recA	Neisseria gonorrhoeae MS11	62.974	98.563	0.621
recA	Neisseria gonorrhoeae MS11	62.974	98.563	0.621
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.303	93.966	0.595
recA	Glaesserella parasuis strain SC1401	60.472	97.414	0.589
recA	Ralstonia pseudosolanacearum GMI1000	65.705	89.655	0.589
recA	Acinetobacter baylyi ADP1	58.739	100	0.589
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.923	93.391	0.569
recA	Acinetobacter baumannii D1279779	61.3	92.816	0.569
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	60.182	94.54	0.569
recA	Vibrio cholerae O1 biovar El Tor strain E7946	60.062	92.816	0.557
recA	Vibrio cholerae strain A1552	60.062	92.816	0.557
recA	Pseudomonas stutzeri DSM 10701	59.568	93.103	0.555
recA	Helicobacter pylori strain NCTC11637	58.359	94.54	0.552
recA	Helicobacter pylori 26695	58.359	94.54	0.552