Detailed information NTG0614134

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: NQD69_RS11210
• Genome accession: NZ_CP101992
• Coordinates: 2198525..2199634 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae strain BCJB3586
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2193525..2204634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NQD69_RS11185 (NQD69_11200)	-	2193897..2194736 (-)	840	WP_000181758.1	energy-coupling factor ABC transporter ATP-binding protein	-
NQD69_RS11190 (NQD69_11205)	pgsA	2194736..2195278 (-)	543	WP_000239225.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
NQD69_RS11195 (NQD69_11210)	yfmH	2195401..2196684 (-)	1284	WP_000217762.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
NQD69_RS11200 (NQD69_11215)	yfmF	2196686..2197930 (-)	1245	WP_000706188.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
NQD69_RS11205 (NQD69_11220)	yaaA	2198169..2198522 (+)	354	WP_000384869.1	S4 domain-containing protein YaaA	-
NQD69_RS11210 (NQD69_11225)	recF	2198525..2199634 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
NQD69_RS11215 (NQD69_11230)	-	2199646..2200512 (-)	867	WP_000398683.1	GRP family sugar transporter	-
NQD69_RS11220 (NQD69_11235)	-	2200568..2201230 (-)	663	WP_001873330.1	helix-turn-helix transcriptional regulator	-
NQD69_RS11225 (NQD69_11240)	guaB	2201305..2202786 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
NQD69_RS11230 (NQD69_11245)	-	2202943..2203428 (-)	486	WP_001034427.1	arginine repressor	-
NQD69_RS11235 (NQD69_11250)	-	2203438..2204118 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=614134 NQD69_RS11210 WP_000264870.1 2198525..2199634(+) (recF) [Streptococcus agalactiae strain BCJB3586]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=614134 NQD69_RS11210 WP_000264870.1 2198525..2199634(+) (recF) [Streptococcus agalactiae strain BCJB3586]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447