Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | K8Z20_RS25060 | Genome accession | NZ_CP083156 |
| Coordinates | 4798242..4799321 (-) | Length | 359 a.a. |
| NCBI ID | WP_021728000.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain ABTS-1857 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4791378..4833132 | 4798242..4799321 | within | 0 |
Gene organization within MGE regions
Location: 4791378..4833132
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8Z20_RS25025 (K8Z20_24775) | - | 4791378..4792361 (+) | 984 | WP_000944665.1 | M23 family metallopeptidase | - |
| K8Z20_RS25030 (K8Z20_24780) | yunB | 4792435..4793166 (-) | 732 | WP_000021802.1 | sporulation protein YunB | - |
| K8Z20_RS25035 (K8Z20_24785) | - | 4793221..4793523 (-) | 303 | WP_000248466.1 | DUF1805 domain-containing protein | - |
| K8Z20_RS25040 (K8Z20_24790) | - | 4793589..4794926 (-) | 1338 | WP_229163597.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| K8Z20_RS25045 (K8Z20_24795) | - | 4795565..4796446 (-) | 882 | WP_000446736.1 | IS3 family transposase | - |
| K8Z20_RS25050 (K8Z20_24800) | - | 4796455..4796751 (-) | 297 | WP_000516529.1 | transposase | - |
| K8Z20_RS25055 (K8Z20_24805) | - | 4797323..4798156 (+) | 834 | WP_021728001.1 | hypothetical protein | - |
| K8Z20_RS25060 (K8Z20_24810) | recA | 4798242..4799321 (-) | 1080 | WP_021728000.1 | recombinase RecA | Machinery gene |
| K8Z20_RS25065 (K8Z20_24815) | - | 4799464..4799793 (+) | 330 | WP_021727999.1 | hypothetical protein | - |
| K8Z20_RS25070 (K8Z20_24820) | - | 4799974..4801026 (-) | 1053 | WP_042991587.1 | N-acetylmuramoyl-L-alanine amidase | - |
| K8Z20_RS25075 (K8Z20_24825) | - | 4801023..4801253 (-) | 231 | Protein_4944 | BhlA/UviB family holin-like peptide | - |
| K8Z20_RS25080 (K8Z20_24830) | - | 4801316..4802596 (-) | 1281 | WP_021728058.1 | BppU family phage baseplate upper protein | - |
| K8Z20_RS25085 (K8Z20_24835) | - | 4802611..4804953 (-) | 2343 | WP_021728057.1 | phage tail spike protein | - |
| K8Z20_RS25090 (K8Z20_24840) | - | 4804950..4805633 (-) | 684 | WP_021728056.1 | phage tail domain-containing protein | - |
| K8Z20_RS25095 (K8Z20_24845) | - | 4805635..4809513 (-) | 3879 | WP_042991588.1 | phage tail tape measure protein | - |
| K8Z20_RS25100 (K8Z20_24850) | - | 4809530..4809718 (-) | 189 | WP_006927278.1 | hypothetical protein | - |
| K8Z20_RS25105 (K8Z20_24855) | - | 4809757..4810143 (-) | 387 | WP_000113340.1 | hypothetical protein | - |
| K8Z20_RS25110 (K8Z20_24860) | - | 4810155..4810790 (-) | 636 | WP_042991589.1 | major tail protein | - |
| K8Z20_RS25115 (K8Z20_24865) | - | 4810802..4811179 (-) | 378 | WP_021727769.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| K8Z20_RS25120 (K8Z20_24870) | - | 4811179..4811508 (-) | 330 | WP_021727768.1 | hypothetical protein | - |
| K8Z20_RS25125 (K8Z20_24875) | - | 4811498..4811830 (-) | 333 | WP_001126094.1 | hypothetical protein | - |
| K8Z20_RS25130 (K8Z20_24880) | - | 4811808..4812068 (-) | 261 | WP_000343863.1 | head-tail connector protein | - |
| K8Z20_RS25135 (K8Z20_24885) | - | 4812070..4813398 (-) | 1329 | WP_021727767.1 | phage major capsid protein | - |
| K8Z20_RS25140 (K8Z20_24890) | - | 4813400..4813978 (-) | 579 | WP_001140506.1 | HK97 family phage prohead protease | - |
| K8Z20_RS25145 (K8Z20_24895) | - | 4813947..4815152 (-) | 1206 | WP_021727766.1 | phage portal protein | - |
| K8Z20_RS25150 (K8Z20_24900) | - | 4815257..4816981 (-) | 1725 | WP_021727765.1 | terminase TerL endonuclease subunit | - |
| K8Z20_RS25155 (K8Z20_24905) | - | 4816978..4817412 (-) | 435 | WP_021727764.1 | P27 family phage terminase small subunit | - |
| K8Z20_RS25160 (K8Z20_24910) | - | 4817532..4817897 (-) | 366 | WP_021727763.1 | HNH endonuclease signature motif containing protein | - |
| K8Z20_RS25165 (K8Z20_24915) | - | 4817894..4818175 (-) | 282 | WP_021727762.1 | hypothetical protein | - |
| K8Z20_RS25170 (K8Z20_24920) | - | 4818304..4818699 (-) | 396 | WP_000460730.1 | DUF1492 domain-containing protein | - |
| K8Z20_RS25175 (K8Z20_24925) | - | 4818879..4819169 (-) | 291 | WP_021727761.1 | hypothetical protein | - |
| K8Z20_RS25180 (K8Z20_24930) | - | 4819229..4819666 (-) | 438 | WP_021727760.1 | hypothetical protein | - |
| K8Z20_RS25185 (K8Z20_24935) | - | 4819739..4820278 (-) | 540 | WP_021727759.1 | ERCC4 domain-containing protein | - |
| K8Z20_RS25190 (K8Z20_24940) | - | 4820275..4820637 (-) | 363 | WP_023901218.1 | YopX family protein | - |
| K8Z20_RS25195 (K8Z20_24945) | - | 4820640..4821068 (-) | 429 | WP_021727757.1 | hypothetical protein | - |
| K8Z20_RS25200 (K8Z20_24950) | - | 4821056..4821295 (-) | 240 | WP_021727756.1 | hypothetical protein | - |
| K8Z20_RS25205 (K8Z20_24955) | - | 4821573..4823927 (-) | 2355 | WP_021727755.1 | phage/plasmid primase, P4 family | - |
| K8Z20_RS25210 (K8Z20_24960) | - | 4823947..4824459 (-) | 513 | WP_021727754.1 | helix-turn-helix domain-containing protein | - |
| K8Z20_RS25215 (K8Z20_24965) | - | 4824532..4824990 (-) | 459 | WP_021727753.1 | DUF669 domain-containing protein | - |
| K8Z20_RS25220 (K8Z20_24970) | - | 4825019..4825690 (-) | 672 | WP_021727752.1 | AAA family ATPase | - |
| K8Z20_RS25225 (K8Z20_24975) | - | 4825696..4825887 (-) | 192 | WP_021727751.1 | hypothetical protein | - |
| K8Z20_RS25230 (K8Z20_24980) | - | 4825889..4826089 (-) | 201 | WP_023901216.1 | hypothetical protein | - |
| K8Z20_RS25235 (K8Z20_24985) | - | 4826052..4826354 (-) | 303 | WP_021727749.1 | hypothetical protein | - |
| K8Z20_RS25240 (K8Z20_24990) | - | 4826354..4826704 (-) | 351 | WP_021727748.1 | hypothetical protein | - |
| K8Z20_RS25245 (K8Z20_24995) | - | 4826701..4826898 (-) | 198 | WP_001262629.1 | hypothetical protein | - |
| K8Z20_RS25250 (K8Z20_25000) | - | 4826917..4827072 (-) | 156 | WP_021727747.1 | hypothetical protein | - |
| K8Z20_RS25255 (K8Z20_25005) | - | 4827133..4827777 (-) | 645 | WP_016097904.1 | sigma-70 family RNA polymerase sigma factor | - |
| K8Z20_RS25260 (K8Z20_25010) | - | 4827802..4828152 (-) | 351 | WP_021727746.1 | hypothetical protein | - |
| K8Z20_RS25265 (K8Z20_25015) | - | 4828171..4828398 (-) | 228 | WP_021727745.1 | hypothetical protein | - |
| K8Z20_RS25270 (K8Z20_25020) | - | 4828399..4828626 (-) | 228 | WP_021727744.1 | hypothetical protein | - |
| K8Z20_RS25275 (K8Z20_25025) | - | 4828627..4828794 (-) | 168 | WP_023901215.1 | hypothetical protein | - |
| K8Z20_RS25280 (K8Z20_25030) | - | 4828791..4828994 (-) | 204 | WP_021727743.1 | hypothetical protein | - |
| K8Z20_RS25285 (K8Z20_25035) | - | 4829021..4829266 (-) | 246 | WP_021727742.1 | helix-turn-helix transcriptional regulator | - |
| K8Z20_RS25290 (K8Z20_25040) | - | 4829431..4830057 (+) | 627 | WP_021727741.1 | XRE family transcriptional regulator | - |
| K8Z20_RS25295 (K8Z20_25045) | - | 4830145..4831188 (+) | 1044 | WP_021727740.1 | tyrosine-type recombinase/integrase | - |
| K8Z20_RS25300 (K8Z20_25050) | sufB | 4831255..4832652 (-) | 1398 | WP_001118827.1 | Fe-S cluster assembly protein SufB | - |
| K8Z20_RS25305 (K8Z20_25055) | sufU | 4832701..4833132 (-) | 432 | WP_000009523.1 | Fe-S cluster assembly sulfur transfer protein SufU | - |
Sequence
Protein
Download Length: 359 a.a. Molecular weight: 38666.84 Da Isoelectric Point: 4.8628
>NTDB_id=604910 K8Z20_RS25060 WP_021728000.1 4798242..4799321(-) (recA) [Bacillus thuringiensis strain ABTS-1857]
MAATENTTKGKEKALEEALKKIVKEFGTGAIMKLGERPNQKVSVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTI
ALHAIAEAQKEGGTAAFIDAEHALDPSYAQKLGVNIDELLMSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEI
DGDMGDSHVGLQARLMGQAMRKISGAISKNGVVAIFLNQIREKVGVSFGSPETTPGGRALKFYSTIRLDVRRGEQLKGKE
SDVLGNKTKVKVVKNKVAPPFKNIDFDILYGEGISLEGELIDIGVDLDIVQKSGAWYSYQEERLGQGRDNAKQFLKENEN
ISNSVRNEIYEYYSPKEDSVVVKEGLINENEPITLKESE
MAATENTTKGKEKALEEALKKIVKEFGTGAIMKLGERPNQKVSVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTI
ALHAIAEAQKEGGTAAFIDAEHALDPSYAQKLGVNIDELLMSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEI
DGDMGDSHVGLQARLMGQAMRKISGAISKNGVVAIFLNQIREKVGVSFGSPETTPGGRALKFYSTIRLDVRRGEQLKGKE
SDVLGNKTKVKVVKNKVAPPFKNIDFDILYGEGISLEGELIDIGVDLDIVQKSGAWYSYQEERLGQGRDNAKQFLKENEN
ISNSVRNEIYEYYSPKEDSVVVKEGLINENEPITLKESE
Nucleotide
Download Length: 1080 bp
>NTDB_id=604910 K8Z20_RS25060 WP_021728000.1 4798242..4799321(-) (recA) [Bacillus thuringiensis strain ABTS-1857]
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATCGTAAAAGAATTTGG
TACAGGGGCTATTATGAAACTGGGTGAGCGACCTAATCAAAAAGTATCTGTCGTATCAAGTGGTTCTGTTGGATTAGATA
ATGCTTTAGGGGTTGGTGGATATCCAAAAGGACGCATTACTGAAATCTTTGGTCCTGAATCTTCAGGTAAGACAACTATA
GCATTACATGCAATTGCAGAAGCGCAAAAAGAAGGTGGAACAGCGGCATTTATTGATGCAGAGCATGCCCTTGACCCTAG
TTATGCACAGAAATTAGGTGTGAATATTGATGAACTGCTCATGTCACAACCAGATACAGGAGAGCAAGCACTAGAGATTG
CAGAAGCTCTAGTTAGAAGTGGGGCTGTAGATATCATTGTGATAGATTCTGTAGCTGCTTTAGTCCCGAAAGCGGAAATT
GATGGGGACATGGGAGATTCACATGTGGGATTGCAGGCTAGATTGATGGGGCAGGCAATGAGAAAAATATCAGGAGCAAT
ATCCAAAAATGGAGTTGTAGCAATATTTTTAAATCAAATCAGAGAAAAAGTTGGTGTTTCTTTTGGGAGTCCTGAGACAA
CACCAGGTGGTAGGGCGTTAAAATTCTATTCAACAATTCGACTAGATGTACGTAGAGGAGAACAGTTGAAAGGAAAAGAG
AGTGACGTTTTAGGGAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTAAAAACATTGACTTTGA
CATCTTATACGGAGAAGGAATCTCCTTAGAGGGAGAGCTTATTGATATTGGTGTAGATTTAGATATTGTTCAGAAAAGTG
GGGCATGGTACTCGTATCAAGAAGAACGTCTTGGACAGGGTAGAGACAATGCCAAACAATTTCTGAAAGAGAATGAAAAC
ATAAGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGATTCTGTTGTTGTGAAAGAGGGGCTTAT
AAATGAAAATGAGCCCATTACTTTAAAAGAGTCGGAATAA
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATCGTAAAAGAATTTGG
TACAGGGGCTATTATGAAACTGGGTGAGCGACCTAATCAAAAAGTATCTGTCGTATCAAGTGGTTCTGTTGGATTAGATA
ATGCTTTAGGGGTTGGTGGATATCCAAAAGGACGCATTACTGAAATCTTTGGTCCTGAATCTTCAGGTAAGACAACTATA
GCATTACATGCAATTGCAGAAGCGCAAAAAGAAGGTGGAACAGCGGCATTTATTGATGCAGAGCATGCCCTTGACCCTAG
TTATGCACAGAAATTAGGTGTGAATATTGATGAACTGCTCATGTCACAACCAGATACAGGAGAGCAAGCACTAGAGATTG
CAGAAGCTCTAGTTAGAAGTGGGGCTGTAGATATCATTGTGATAGATTCTGTAGCTGCTTTAGTCCCGAAAGCGGAAATT
GATGGGGACATGGGAGATTCACATGTGGGATTGCAGGCTAGATTGATGGGGCAGGCAATGAGAAAAATATCAGGAGCAAT
ATCCAAAAATGGAGTTGTAGCAATATTTTTAAATCAAATCAGAGAAAAAGTTGGTGTTTCTTTTGGGAGTCCTGAGACAA
CACCAGGTGGTAGGGCGTTAAAATTCTATTCAACAATTCGACTAGATGTACGTAGAGGAGAACAGTTGAAAGGAAAAGAG
AGTGACGTTTTAGGGAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTAAAAACATTGACTTTGA
CATCTTATACGGAGAAGGAATCTCCTTAGAGGGAGAGCTTATTGATATTGGTGTAGATTTAGATATTGTTCAGAAAAGTG
GGGCATGGTACTCGTATCAAGAAGAACGTCTTGGACAGGGTAGAGACAATGCCAAACAATTTCTGAAAGAGAATGAAAAC
ATAAGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGATTCTGTTGTTGTGAAAGAGGGGCTTAT
AAATGAAAATGAGCCCATTACTTTAAAAGAGTCGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.