Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | ABWED_RS08420 | Genome accession | NZ_CP082143 |
| Coordinates | 1744472..1745515 (+) | Length | 347 a.a. |
| NCBI ID | WP_004279873.1 | Uniprot ID | N9QP37 |
| Organism | Acinetobacter lwoffii strain ED23-35 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1709760..1745515 | 1744472..1745515 | within | 0 |
Gene organization within MGE regions
Location: 1709760..1745515
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWED_RS08210 (ABWED_1710) | - | 1709760..1710302 (-) | 543 | WP_374955893.1 | glycoside hydrolase family protein | - |
| ABWED_RS08215 (ABWED_1711) | - | 1710286..1710549 (-) | 264 | WP_253147943.1 | holin | - |
| ABWED_RS08220 (ABWED_1712) | - | 1710633..1712819 (-) | 2187 | WP_374955894.1 | hypothetical protein | - |
| ABWED_RS08225 (ABWED_1713) | terL | 1712829..1714517 (-) | 1689 | WP_374955895.1 | phage terminase large subunit | - |
| ABWED_RS08230 (ABWED_1714) | - | 1714517..1714825 (-) | 309 | WP_374955896.1 | hypothetical protein | - |
| ABWED_RS08235 (ABWED_1715) | - | 1714892..1717417 (-) | 2526 | WP_374955897.1 | hypothetical protein | - |
| ABWED_RS08240 (ABWED_1716) | - | 1717417..1717683 (-) | 267 | WP_374955898.1 | hypothetical protein | - |
| ABWED_RS08245 (ABWED_1717) | - | 1717749..1720574 (-) | 2826 | WP_374955899.1 | lytic transglycosylase domain-containing protein | - |
| ABWED_RS08250 (ABWED_1718) | - | 1720574..1722607 (-) | 2034 | WP_374955900.1 | methyl-coenzyme M reductase | - |
| ABWED_RS08255 (ABWED_1719) | - | 1722607..1722990 (-) | 384 | WP_374955901.1 | hypothetical protein | - |
| ABWED_RS08260 (ABWED_1720) | - | 1722993..1723445 (-) | 453 | WP_374955902.1 | GNAT family N-acetyltransferase | - |
| ABWED_RS08265 (ABWED_1721) | - | 1723448..1725472 (-) | 2025 | WP_374955903.1 | carbohydrate-binding protein | - |
| ABWED_RS08270 (ABWED_1722) | - | 1725472..1726035 (-) | 564 | WP_374955904.1 | hypothetical protein | - |
| ABWED_RS08275 (ABWED_1723) | - | 1726094..1726420 (-) | 327 | WP_374955905.1 | hypothetical protein | - |
| ABWED_RS08280 (ABWED_1725) | - | 1726552..1726773 (-) | 222 | WP_374955906.1 | hypothetical protein | - |
| ABWED_RS08285 (ABWED_1726) | - | 1726847..1727746 (-) | 900 | WP_314136533.1 | phage capsid protein | - |
| ABWED_RS08290 (ABWED_1727) | - | 1727761..1728399 (-) | 639 | WP_005266549.1 | hypothetical protein | - |
| ABWED_RS08295 (ABWED_1728) | - | 1728392..1728937 (-) | 546 | WP_374955907.1 | hypothetical protein | - |
| ABWED_RS08300 (ABWED_1729) | - | 1728934..1730592 (-) | 1659 | WP_374955908.1 | portal protein | - |
| ABWED_RS08305 (ABWED_1730) | - | 1730596..1730826 (-) | 231 | WP_005251554.1 | hypothetical protein | - |
| ABWED_RS08310 (ABWED_1731) | - | 1730829..1731311 (-) | 483 | WP_374955909.1 | hypothetical protein | - |
| ABWED_RS08315 (ABWED_1732) | - | 1731447..1732619 (+) | 1173 | WP_374955910.1 | hypothetical protein | - |
| ABWED_RS08320 (ABWED_1733) | - | 1732616..1733074 (-) | 459 | WP_374955911.1 | hypothetical protein | - |
| ABWED_RS08325 (ABWED_1734) | - | 1733106..1733621 (-) | 516 | WP_374955912.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ABWED_RS08330 (ABWED_1735) | - | 1733618..1733869 (-) | 252 | WP_244783154.1 | hypothetical protein | - |
| ABWED_RS08335 (ABWED_1736) | - | 1733866..1734609 (-) | 744 | WP_374955913.1 | ATP-binding protein | - |
| ABWED_RS08340 (ABWED_1737) | - | 1734606..1735541 (-) | 936 | WP_374955914.1 | replication protein | - |
| ABWED_RS08345 (ABWED_1738) | - | 1735541..1735861 (-) | 321 | WP_374955915.1 | hypothetical protein | - |
| ABWED_RS08350 (ABWED_1739) | - | 1735872..1736093 (-) | 222 | WP_374955916.1 | Cro/CI family transcriptional regulator | - |
| ABWED_RS08355 (ABWED_1740) | - | 1736184..1736864 (+) | 681 | WP_374955917.1 | LexA family protein | - |
| ABWED_RS08360 (ABWED_1741) | - | 1737058..1737423 (+) | 366 | WP_374955918.1 | hypothetical protein | - |
| ABWED_RS08365 (ABWED_1743) | - | 1737742..1737984 (+) | 243 | WP_374955919.1 | hypothetical protein | - |
| ABWED_RS08370 (ABWED_1744) | - | 1737984..1738157 (+) | 174 | WP_374955920.1 | hypothetical protein | - |
| ABWED_RS08375 (ABWED_1745) | - | 1738154..1738972 (+) | 819 | WP_348942034.1 | PD-(D/E)XK nuclease family protein | - |
| ABWED_RS08380 (ABWED_1746) | - | 1739001..1740452 (+) | 1452 | WP_374955921.1 | recombinase RecT | - |
| ABWED_RS08385 (ABWED_1747) | - | 1740498..1740722 (+) | 225 | WP_253099432.1 | hypothetical protein | - |
| ABWED_RS08390 (ABWED_1748) | - | 1740722..1741210 (+) | 489 | WP_374955922.1 | hypothetical protein | - |
| ABWED_RS08395 (ABWED_1749) | - | 1741203..1741565 (+) | 363 | WP_374955923.1 | hypothetical protein | - |
| ABWED_RS08400 | - | 1741565..1741786 (+) | 222 | WP_005251506.1 | hypothetical protein | - |
| ABWED_RS08405 (ABWED_1750) | - | 1741696..1742997 (-) | 1302 | WP_374955924.1 | tyrosine-type recombinase/integrase | - |
| ABWED_RS08410 (ABWED_1751) | - | 1743219..1743893 (+) | 675 | WP_374955925.1 | HAD-IA family hydrolase | - |
| ABWED_RS08415 (ABWED_1752) | - | 1743886..1744326 (+) | 441 | WP_004646726.1 | RNA-binding S4 domain-containing protein | - |
| ABWED_RS08420 (ABWED_1753) | recA | 1744472..1745515 (+) | 1044 | WP_004279873.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37821.37 Da Isoelectric Point: 5.1679
>NTDB_id=599489 ABWED_RS08420 WP_004279873.1 1744472..1745515(+) (recA) [Acinetobacter lwoffii strain ED23-35]
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKEMAQTIEK
LIRDQLLTKAVVVEEDDSKEEPDFLDA
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKEMAQTIEK
LIRDQLLTKAVVVEEDDSKEEPDFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=599489 ABWED_RS08420 WP_004279873.1 1744472..1745515(+) (recA) [Acinetobacter lwoffii strain ED23-35]
ATGGATGAGAATAAAAACAAGGCGCTCAACGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAATACAGTTATGCG
TCTTGGTGACAATACCGTTCAGGCAGTTGAAGCTGTGTCTACAGGCTCTTTAACGCTGGATATTGCACTCGGTATTGGTG
GTTTACCTAAAGGTCGTATCGTCGAGATCTATGGTCCTGAATCTTCAGGTAAAACCACAATGACCCTGCAAGCAATTGCA
GAGTGTCAGAAAGCAGGCGGTACGTGTGCATTCATCGATGCGGAACATGCACTTGATCCTCAATATGCGCGCAAACTGGG
CGTAGATATTGACAACCTGCTGGTATCGCAACCGGATCACGGTGAACAGGCACTTGAAATCGCAGACATGCTGGTACGCT
CTGGCGCGATCGACATGATCGTTGTCGACTCTGTTGCTGCATTGACTCCGCGCGCTGAAATTGAAGGCGAAATGGGTGAC
TCGCATATGGGTCTGCAAGCCCGTTTAATGAGCCAGGCACTGCGTAAAATTACTGGTAATGCCAAGCGTTCCAACTGTAT
GGTGATCTTCATTAACCAGATTCGTATGAAGATTGGTGTCATGTTTGGTAGCCCTGAAACCACAACTGGTGGTAACGCAC
TGAAATTCTATGCCTCTGTTCGCTTGGACATCCGTCGTATCGGCCAAGTGAAAGAAGGTGACGAGATTGTTGGTTCTGAA
ACCAAAGTCAAAGTCGTGAAAAACAAAATGGCGCCTCCGTTTAAAGAAGCTTTATTCCAGATTCTTTATGGCAAAGGTGT
TAACCATCTAGGTGAATTGATCGACCTTGCTGTACAGCAAGAAATCGTGCAGAAAGCTGGTGCGTGGTATTCTTATCAAG
GCGACAAAATTGGCCAGGGTAAGAACAACACCATCCGTTATCTGGAAGAGCATAAAGAAATGGCTCAGACGATTGAAAAA
CTGATTCGTGACCAGCTTCTGACTAAAGCAGTGGTTGTTGAAGAAGACGATAGCAAGGAAGAACCTGACTTTTTAGATGC
ATGA
ATGGATGAGAATAAAAACAAGGCGCTCAACGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAATACAGTTATGCG
TCTTGGTGACAATACCGTTCAGGCAGTTGAAGCTGTGTCTACAGGCTCTTTAACGCTGGATATTGCACTCGGTATTGGTG
GTTTACCTAAAGGTCGTATCGTCGAGATCTATGGTCCTGAATCTTCAGGTAAAACCACAATGACCCTGCAAGCAATTGCA
GAGTGTCAGAAAGCAGGCGGTACGTGTGCATTCATCGATGCGGAACATGCACTTGATCCTCAATATGCGCGCAAACTGGG
CGTAGATATTGACAACCTGCTGGTATCGCAACCGGATCACGGTGAACAGGCACTTGAAATCGCAGACATGCTGGTACGCT
CTGGCGCGATCGACATGATCGTTGTCGACTCTGTTGCTGCATTGACTCCGCGCGCTGAAATTGAAGGCGAAATGGGTGAC
TCGCATATGGGTCTGCAAGCCCGTTTAATGAGCCAGGCACTGCGTAAAATTACTGGTAATGCCAAGCGTTCCAACTGTAT
GGTGATCTTCATTAACCAGATTCGTATGAAGATTGGTGTCATGTTTGGTAGCCCTGAAACCACAACTGGTGGTAACGCAC
TGAAATTCTATGCCTCTGTTCGCTTGGACATCCGTCGTATCGGCCAAGTGAAAGAAGGTGACGAGATTGTTGGTTCTGAA
ACCAAAGTCAAAGTCGTGAAAAACAAAATGGCGCCTCCGTTTAAAGAAGCTTTATTCCAGATTCTTTATGGCAAAGGTGT
TAACCATCTAGGTGAATTGATCGACCTTGCTGTACAGCAAGAAATCGTGCAGAAAGCTGGTGCGTGGTATTCTTATCAAG
GCGACAAAATTGGCCAGGGTAAGAACAACACCATCCGTTATCTGGAAGAGCATAAAGAAATGGCTCAGACGATTGAAAAA
CTGATTCGTGACCAGCTTCTGACTAAAGCAGTGGTTGTTGAAGAAGACGATAGCAAGGAAGAACCTGACTTTTTAGATGC
ATGA
Similar proteins
Only experimentally validated proteins are listed.