Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | KUD94_RS11615 | Genome accession | NZ_CP078069 |
| Coordinates | 2418643..2419752 (-) | Length | 369 a.a. |
| NCBI ID | WP_255568784.1 | Uniprot ID | - |
| Organism | Comamonas sp. NLF-1-9 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2413643..2424752
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KUD94_RS11575 (KUD94_11575) | - | 2414028..2414453 (-) | 426 | WP_218237357.1 | DUF3293 domain-containing protein | - |
| KUD94_RS11580 (KUD94_11580) | - | 2414467..2415654 (-) | 1188 | WP_218237358.1 | acetyl-CoA C-acyltransferase family protein | - |
| KUD94_RS11585 (KUD94_11585) | - | 2415677..2416456 (-) | 780 | WP_218237359.1 | enoyl-CoA hydratase/isomerase family protein | - |
| KUD94_RS11590 (KUD94_11590) | - | 2416550..2416720 (-) | 171 | WP_218239322.1 | hypothetical protein | - |
| KUD94_RS11595 (KUD94_11595) | - | 2416710..2416934 (+) | 225 | Protein_2282 | TetR/AcrR family transcriptional regulator | - |
| KUD94_RS11600 (KUD94_11600) | - | 2416933..2417385 (-) | 453 | WP_218237360.1 | PACE efflux transporter | - |
| KUD94_RS11605 (KUD94_11605) | - | 2417460..2418011 (+) | 552 | WP_218237361.1 | shikimate kinase | - |
| KUD94_RS11610 (KUD94_11610) | recX | 2418032..2418520 (-) | 489 | WP_218237362.1 | recombination regulator RecX | - |
| KUD94_RS11615 (KUD94_11615) | recA | 2418643..2419752 (-) | 1110 | WP_255568784.1 | recombinase RecA | Machinery gene |
| KUD94_RS11620 (KUD94_11620) | - | 2419876..2420349 (+) | 474 | WP_218239282.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| KUD94_RS11625 (KUD94_11625) | - | 2420448..2421122 (+) | 675 | WP_218237363.1 | response regulator transcription factor | - |
| KUD94_RS11630 (KUD94_11630) | - | 2421128..2421490 (-) | 363 | WP_218237364.1 | hypothetical protein | - |
| KUD94_RS11635 (KUD94_11635) | - | 2421700..2423154 (+) | 1455 | WP_218237365.1 | sensor histidine kinase | - |
| KUD94_RS11640 (KUD94_11640) | - | 2423177..2423872 (-) | 696 | WP_218237366.1 | SPOR domain-containing protein | - |
| KUD94_RS11645 (KUD94_11645) | - | 2423876..2424694 (-) | 819 | WP_218237367.1 | biotin--[acetyl-CoA-carboxylase] ligase | - |
Sequence
Protein
Download Length: 369 a.a. Molecular weight: 39385.23 Da Isoelectric Point: 5.9952
>NTDB_id=586549 KUD94_RS11615 WP_255568784.1 2418643..2419752(-) (recA) [Comamonas sp. NLF-1-9]
MDTASKSTPAQAEKAKALAAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVIAEMQKQGGTCAFIDAEHALDTSYAQKLGVNVNDILISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALVP
KAEIEGDMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGTL
KKGDQAIGNETRVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARILEKSGAWYAYNGEKIGQGRDNAREFLRE
NPDLAHEIENKVRASLGIALLPTLGKPRKDDKADKADKPAKDAPVAAEL
MDTASKSTPAQAEKAKALAAALAQIEKQFGKGTIMRLGEGEAIEDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSG
KTTLTLQVIAEMQKQGGTCAFIDAEHALDTSYAQKLGVNVNDILISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAALVP
KAEIEGDMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGTL
KKGDQAIGNETRVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVNARILEKSGAWYAYNGEKIGQGRDNAREFLRE
NPDLAHEIENKVRASLGIALLPTLGKPRKDDKADKADKPAKDAPVAAEL
Nucleotide
Download Length: 1110 bp
>NTDB_id=586549 KUD94_RS11615 WP_255568784.1 2418643..2419752(-) (recA) [Comamonas sp. NLF-1-9]
ATGGACACAGCAAGCAAGAGCACCCCCGCACAAGCCGAAAAGGCCAAGGCCCTGGCCGCAGCGCTGGCGCAAATCGAAAA
GCAGTTTGGCAAGGGCACCATCATGCGCCTGGGCGAGGGCGAGGCGATCGAGGACATCCAGGTCGTCTCCACCGGCTCGC
TCGGCCTGGACATTGCCCTGGGCGTGGGCGGCCTGCCGCGCGGCAGAGTGGTCGAGATCTACGGGCCGGAAAGCTCGGGC
AAGACCACGCTCACGCTGCAGGTGATTGCCGAAATGCAAAAGCAGGGCGGCACCTGCGCCTTCATCGACGCCGAGCACGC
GCTCGATACCAGCTATGCGCAAAAGCTCGGCGTCAACGTCAACGACATCCTGATCAGCCAGCCCGACACCGGCGAGCAGG
CGCTCGAGATCGTGGACAGCCTGGTGCGCTCGGGCGCGGTCGATCTGATCGTGGTCGACTCGGTCGCCGCCCTGGTACCC
AAGGCCGAAATCGAGGGCGACATGGGCGATTCGCTGCCCGGCCTGCAGGCGCGGCTGATGAGCCAGGCGCTGCGCAAGCT
CACCGCGACCATCAAGAAGACCAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCA
GCCCCGAGACGACGACGGGCGGCAACGCGCTCAAGTTCTACGCCAGCGTGCGCCTGGACATCCGGCGCATAGGCACGCTC
AAGAAGGGCGACCAGGCGATAGGCAATGAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCAGCCCGCCGTTCAAGACGGC
CGAGTTCGACATCCTGTTCGGCGAGGGCATTTCGCGCGAGGGCGAGATCATCGACATGGGCGTGAACGCGCGCATTCTGG
AAAAAAGCGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGGCGCGACAACGCGCGCGAATTCCTGCGCGAG
AACCCTGACCTCGCCCACGAGATCGAGAACAAGGTGCGCGCCAGCCTGGGCATCGCCCTGCTGCCGACGCTGGGCAAGCC
CAGGAAGGACGACAAAGCCGACAAGGCCGACAAGCCGGCCAAGGACGCGCCGGTAGCCGCAGAGCTGTAG
ATGGACACAGCAAGCAAGAGCACCCCCGCACAAGCCGAAAAGGCCAAGGCCCTGGCCGCAGCGCTGGCGCAAATCGAAAA
GCAGTTTGGCAAGGGCACCATCATGCGCCTGGGCGAGGGCGAGGCGATCGAGGACATCCAGGTCGTCTCCACCGGCTCGC
TCGGCCTGGACATTGCCCTGGGCGTGGGCGGCCTGCCGCGCGGCAGAGTGGTCGAGATCTACGGGCCGGAAAGCTCGGGC
AAGACCACGCTCACGCTGCAGGTGATTGCCGAAATGCAAAAGCAGGGCGGCACCTGCGCCTTCATCGACGCCGAGCACGC
GCTCGATACCAGCTATGCGCAAAAGCTCGGCGTCAACGTCAACGACATCCTGATCAGCCAGCCCGACACCGGCGAGCAGG
CGCTCGAGATCGTGGACAGCCTGGTGCGCTCGGGCGCGGTCGATCTGATCGTGGTCGACTCGGTCGCCGCCCTGGTACCC
AAGGCCGAAATCGAGGGCGACATGGGCGATTCGCTGCCCGGCCTGCAGGCGCGGCTGATGAGCCAGGCGCTGCGCAAGCT
CACCGCGACCATCAAGAAGACCAACTGCATGGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCA
GCCCCGAGACGACGACGGGCGGCAACGCGCTCAAGTTCTACGCCAGCGTGCGCCTGGACATCCGGCGCATAGGCACGCTC
AAGAAGGGCGACCAGGCGATAGGCAATGAAACCCGCGTCAAGGTGGTCAAGAACAAGGTCAGCCCGCCGTTCAAGACGGC
CGAGTTCGACATCCTGTTCGGCGAGGGCATTTCGCGCGAGGGCGAGATCATCGACATGGGCGTGAACGCGCGCATTCTGG
AAAAAAGCGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGGCGCGACAACGCGCGCGAATTCCTGCGCGAG
AACCCTGACCTCGCCCACGAGATCGAGAACAAGGTGCGCGCCAGCCTGGGCATCGCCCTGCTGCCGACGCTGGGCAAGCC
CAGGAAGGACGACAAAGCCGACAAGGCCGACAAGCCGGCCAAGGACGCGCCGGTAGCCGCAGAGCTGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.