Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | EGK58_RS08665 | Genome accession | NZ_CP078027 |
| Coordinates | 1803476..1804519 (+) | Length | 347 a.a. |
| NCBI ID | WP_004786150.1 | Uniprot ID | A0AAU0NHN0 |
| Organism | Acinetobacter variabilis strain AV_175 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1798476..1809519
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGK58_RS08630 (EGK58_008630) | rraA | 1798484..1798993 (-) | 510 | WP_125278329.1 | ribonuclease E activity regulator RraA | - |
| EGK58_RS08635 (EGK58_008635) | - | 1799006..1799671 (-) | 666 | WP_034702612.1 | NAD-dependent epimerase/dehydratase family protein | - |
| EGK58_RS08640 (EGK58_008640) | rpsT | 1799885..1800154 (+) | 270 | WP_004786139.1 | 30S ribosomal protein S20 | - |
| EGK58_RS16905 | - | 1800294..1800416 (-) | 123 | WP_004786141.1 | hypothetical protein | - |
| EGK58_RS08645 (EGK58_008645) | - | 1800537..1801286 (-) | 750 | WP_125278330.1 | histidine phosphatase family protein | - |
| EGK58_RS08650 (EGK58_008650) | - | 1801347..1802198 (-) | 852 | WP_125278331.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ family protein | - |
| EGK58_RS08655 (EGK58_008655) | - | 1802211..1802897 (+) | 687 | WP_125278332.1 | HAD hydrolase-like protein | - |
| EGK58_RS08660 (EGK58_008660) | - | 1802890..1803330 (+) | 441 | WP_125278333.1 | RNA-binding S4 domain-containing protein | - |
| EGK58_RS08665 (EGK58_008665) | recA | 1803476..1804519 (+) | 1044 | WP_004786150.1 | recombinase RecA | Machinery gene |
| EGK58_RS08670 (EGK58_008670) | - | 1804595..1805209 (+) | 615 | WP_125278334.1 | regulatory protein RecX | - |
| EGK58_RS08680 (EGK58_008680) | - | 1805907..1806710 (+) | 804 | WP_125278335.1 | YbgF trimerization domain-containing protein | - |
| EGK58_RS08685 (EGK58_008685) | lpxA | 1806779..1807567 (-) | 789 | WP_004786156.1 | acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase | - |
| EGK58_RS08690 (EGK58_008690) | fabZ | 1807564..1808049 (-) | 486 | WP_171064833.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EGK58_RS08695 (EGK58_008695) | lpxD | 1808055..1809125 (-) | 1071 | WP_125278336.1 | UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37777.24 Da Isoelectric Point: 4.9603
>NTDB_id=586419 EGK58_RS08665 WP_004786150.1 1803476..1804519(+) (recA) [Acinetobacter variabilis strain AV_175]
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKELADTIEK
LIREQLLTTGKVVEDKDEEEPADFLDA
MDENKNKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELIDLAVQQEIVQKAGAWYSYQGDKIGQGKNNTIRYLEEHKELADTIEK
LIREQLLTTGKVVEDKDEEEPADFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=586419 EGK58_RS08665 WP_004786150.1 1803476..1804519(+) (recA) [Acinetobacter variabilis strain AV_175]
ATGGATGAGAATAAAAACAAGGCGCTCAATGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTGATGCG
TCTTGGTGACAATACCGTGCAAGCAGTTGAAGCTGTATCTACAGGCTCTTTAACGCTTGATATTGCACTCGGTATTGGTG
GTTTACCGAAAGGCCGTATTATCGAGATTTATGGTCCTGAATCTTCAGGTAAAACCACAATGACATTGCAAGCGATTGCT
GAATGTCAAAAAGCTGGCGGTACATGTGCATTCATCGATGCCGAGCACGCGCTTGACCCTCAATATGCCCGTAAACTCGG
TGTAGATATTGATAACCTGCTGGTTTCTCAGCCAGACAACGGTGAACAGGCACTTGAAATCGCTGACATGCTGGTGCGTT
CCGGTGCGATTGACCTGATCGTAGTCGACTCTGTTGCTGCATTGACGCCTCGTGCCGAGATTGAAGGTGAAATGGGTGAC
TCACATATGGGTCTGCAAGCACGTTTGATGAGCCAGGCACTGCGTAAAATTACCGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATCTTCATTAACCAGATCCGTATGAAGATTGGTGTAATGTTCGGTAGCCCAGAAACGACTACTGGTGGTAATGCAC
TTAAATTCTACGCTTCGGTACGTCTGGATATTCGCCGTATCGGTCAGGTAAAAGAAGGCGATGAGATTGTAGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAATAAAATGGCACCTCCATTCAGAGAAGCTCTGTTCCAGATTCTGTATGGTAAAGGTGT
TAACCATCTTGGTGAACTGATTGACCTTGCAGTACAGCAAGAAATTGTTCAGAAAGCAGGTGCATGGTATTCATATCAAG
GCGACAAGATTGGCCAAGGTAAAAACAATACCATCCGTTATCTTGAAGAACACAAAGAGCTGGCGGATACTATTGAAAAA
CTGATCCGTGAGCAACTGCTTACTACAGGCAAAGTAGTCGAAGATAAAGACGAAGAAGAACCAGCAGACTTTCTGGATGC
ATAA
ATGGATGAGAATAAAAACAAGGCGCTCAATGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTGATGCG
TCTTGGTGACAATACCGTGCAAGCAGTTGAAGCTGTATCTACAGGCTCTTTAACGCTTGATATTGCACTCGGTATTGGTG
GTTTACCGAAAGGCCGTATTATCGAGATTTATGGTCCTGAATCTTCAGGTAAAACCACAATGACATTGCAAGCGATTGCT
GAATGTCAAAAAGCTGGCGGTACATGTGCATTCATCGATGCCGAGCACGCGCTTGACCCTCAATATGCCCGTAAACTCGG
TGTAGATATTGATAACCTGCTGGTTTCTCAGCCAGACAACGGTGAACAGGCACTTGAAATCGCTGACATGCTGGTGCGTT
CCGGTGCGATTGACCTGATCGTAGTCGACTCTGTTGCTGCATTGACGCCTCGTGCCGAGATTGAAGGTGAAATGGGTGAC
TCACATATGGGTCTGCAAGCACGTTTGATGAGCCAGGCACTGCGTAAAATTACCGGTAATGCCAAGCGTTCAAACTGTAT
GGTGATCTTCATTAACCAGATCCGTATGAAGATTGGTGTAATGTTCGGTAGCCCAGAAACGACTACTGGTGGTAATGCAC
TTAAATTCTACGCTTCGGTACGTCTGGATATTCGCCGTATCGGTCAGGTAAAAGAAGGCGATGAGATTGTAGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAATAAAATGGCACCTCCATTCAGAGAAGCTCTGTTCCAGATTCTGTATGGTAAAGGTGT
TAACCATCTTGGTGAACTGATTGACCTTGCAGTACAGCAAGAAATTGTTCAGAAAGCAGGTGCATGGTATTCATATCAAG
GCGACAAGATTGGCCAAGGTAAAAACAATACCATCCGTTATCTTGAAGAACACAAAGAGCTGGCGGATACTATTGAAAAA
CTGATCCGTGAGCAACTGCTTACTACAGGCAAAGTAGTCGAAGATAAAGACGAAGAAGAACCAGCAGACTTTCTGGATGC
ATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.