Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HU759_RS06975 | Genome accession | NZ_CP077082 |
| Coordinates | 1565647..1566705 (+) | Length | 352 a.a. |
| NCBI ID | WP_048720087.1 | Uniprot ID | A0A1H1ITB2 |
| Organism | Pseudomonas sp. OE 28.3 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1547910..1566705 | 1565647..1566705 | within | 0 |
Gene organization within MGE regions
Location: 1547910..1566705
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU759_RS06850 (HU759_006850) | - | 1548794..1548952 (+) | 159 | WP_017137056.1 | hypothetical protein | - |
| HU759_RS06855 (HU759_006855) | - | 1549238..1549576 (+) | 339 | WP_138451265.1 | phage holin family protein | - |
| HU759_RS06860 (HU759_006860) | - | 1549600..1550115 (+) | 516 | WP_186616800.1 | hypothetical protein | - |
| HU759_RS06865 (HU759_006865) | - | 1550119..1550730 (+) | 612 | WP_017137059.1 | phage baseplate assembly protein V | - |
| HU759_RS06870 (HU759_006870) | - | 1550740..1551072 (+) | 333 | WP_017137060.1 | phage baseplate protein | - |
| HU759_RS06875 (HU759_006875) | - | 1551069..1552064 (+) | 996 | WP_170036401.1 | baseplate J/gp47 family protein | - |
| HU759_RS06880 (HU759_006880) | - | 1552061..1552690 (+) | 630 | WP_169985340.1 | phage tail protein I | - |
| HU759_RS29800 | - | 1552691..1554631 (+) | 1941 | WP_225933035.1 | phage tail protein | - |
| HU759_RS30030 | - | 1554812..1555069 (+) | 258 | WP_346274606.1 | phage tail assembly chaperone | - |
| HU759_RS06895 (HU759_006895) | - | 1555149..1555340 (+) | 192 | WP_146233153.1 | hypothetical protein | - |
| HU759_RS06900 (HU759_006900) | - | 1555343..1556509 (+) | 1167 | WP_170036405.1 | phage tail protein | - |
| HU759_RS06905 (HU759_006905) | - | 1556509..1557015 (+) | 507 | WP_099548528.1 | phage major tail tube protein | - |
| HU759_RS06910 (HU759_006910) | - | 1557169..1557741 (+) | 573 | WP_170036407.1 | phage tail assembly protein | - |
| HU759_RS06915 (HU759_006915) | - | 1557869..1559704 (+) | 1836 | WP_170036409.1 | phage tail tape measure protein | - |
| HU759_RS06920 (HU759_006920) | - | 1559704..1560087 (+) | 384 | WP_017137070.1 | phage tail protein | - |
| HU759_RS06925 (HU759_006925) | - | 1560080..1560292 (+) | 213 | WP_017137071.1 | tail protein X | - |
| HU759_RS06930 (HU759_006930) | - | 1560302..1561312 (+) | 1011 | WP_186616801.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| HU759_RS06935 (HU759_006935) | - | 1561360..1561518 (+) | 159 | WP_138451102.1 | Com family DNA-binding transcriptional regulator | - |
| HU759_RS06940 (HU759_006940) | - | 1561557..1562519 (+) | 963 | WP_170036413.1 | hypothetical protein | - |
| HU759_RS06945 (HU759_006945) | - | 1562677..1562853 (+) | 177 | WP_186616802.1 | hypothetical protein | - |
| HU759_RS06950 (HU759_006950) | - | 1562982..1563179 (+) | 198 | WP_056857599.1 | hypothetical protein | - |
| HU759_RS06955 (HU759_006955) | - | 1563257..1563448 (+) | 192 | WP_186616803.1 | Com family DNA-binding transcriptional regulator | - |
| HU759_RS06960 (HU759_006960) | - | 1563581..1564342 (+) | 762 | WP_170036530.1 | N-acetylmuramoyl-L-alanine amidase | - |
| HU759_RS06965 (HU759_006965) | - | 1564397..1564954 (+) | 558 | WP_138451097.1 | glycoside hydrolase family 19 protein | - |
| HU759_RS06970 (HU759_006970) | - | 1565063..1565563 (+) | 501 | WP_138451094.1 | CinA family protein | - |
| HU759_RS06975 (HU759_006975) | recA | 1565647..1566705 (+) | 1059 | WP_048720087.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37606.16 Da Isoelectric Point: 5.3036
>NTDB_id=578861 HU759_RS06975 WP_048720087.1 1565647..1566705(+) (recA) [Pseudomonas sp. OE 28.3]
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTPAPDVKAAANREPVEEVEEADTDI
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
QAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGSKIGQGKANSAKFLADNPDIAATLEK
QIRDKLLTPAPDVKAAANREPVEEVEEADTDI
Nucleotide
Download Length: 1059 bp
>NTDB_id=578861 HU759_RS06975 WP_048720087.1 1565647..1566705(+) (recA) [Pseudomonas sp. OE 28.3]
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCACTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTGATTGCC
CAGGCGCAAAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGACCCGGAATACGCCGGTAAGCTGGG
CGTCAACGTTGACGACCTGCTGGTTTCCCAGCCGGACACCGGTGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTACCGAAAGCTGAAATCGAAGGCGAAATGGGCGAC
ATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATTACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTAATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTGAAGGAAGGTGACGAAGTTGTTGGTAGCGAA
ACTCGCGTTAAAGTCGTGAAGAACAAGGTCGCTCCGCCTTTCCGTCAGGCAGAGTTCCAGATTCTCTACGGCAAGGGTAT
CTACCTGAACGGCGAGATGATTGACCTGGGCGTACTGCACGGTTTCGTCGAGAAGTCCGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCAGACAACCCGGATATCGCTGCCACGCTTGAGAAG
CAGATTCGCGACAAGCTGCTGACCCCAGCGCCAGACGTGAAAGCTGCCGCCAACCGCGAGCCGGTTGAAGAAGTGGAAGA
AGCTGACACTGATATCTGA
ATGGACGACAACAAGAAGAAAGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGTCAATTCGGCAAGGGTGCCGTAATGCG
TATGGGCGATCACGACCGTCAGGCGATCCCGGCTATTTCCACTGGCTCTCTGGGTCTGGACATCGCACTCGGCATTGGCG
GCCTGCCAAAAGGCCGTATCGTTGAAATCTACGGTCCTGAATCTTCCGGTAAAACCACCCTGACCCTGTCGGTGATTGCC
CAGGCGCAAAAAATGGGCGCCACCTGTGCGTTCGTCGACGCCGAGCACGCCCTGGACCCGGAATACGCCGGTAAGCTGGG
CGTCAACGTTGACGACCTGCTGGTTTCCCAGCCGGACACCGGTGAGCAAGCCCTGGAAATCACCGACATGCTGGTGCGCT
CCAACGCCATCGACGTGATCGTGGTCGACTCCGTGGCTGCCCTGGTACCGAAAGCTGAAATCGAAGGCGAAATGGGCGAC
ATGCACGTGGGCCTGCAAGCCCGCCTGATGTCCCAGGCGCTGCGTAAAATTACCGGTAACATCAAGAACGCCAACTGCCT
GGTGATCTTCATCAACCAGATCCGTATGAAGATCGGCGTAATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCGC
TGAAGTTCTACGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTGAAGGAAGGTGACGAAGTTGTTGGTAGCGAA
ACTCGCGTTAAAGTCGTGAAGAACAAGGTCGCTCCGCCTTTCCGTCAGGCAGAGTTCCAGATTCTCTACGGCAAGGGTAT
CTACCTGAACGGCGAGATGATTGACCTGGGCGTACTGCACGGTTTCGTCGAGAAGTCCGGTGCCTGGTATGCCTACAACG
GCAGCAAGATCGGTCAGGGCAAGGCCAACTCGGCCAAGTTCCTGGCAGACAACCCGGATATCGCTGCCACGCTTGAGAAG
CAGATTCGCGACAAGCTGCTGACCCCAGCGCCAGACGTGAAAGCTGCCGCCAACCGCGAGCCGGTTGAAGAAGTGGAAGA
AGCTGACACTGATATCTGA
Similar proteins
Only experimentally validated proteins are listed.