Detailed information NTG0057137

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: R2APBS1_RS12815
• Genome accession: NC_020541
• Coordinates: 2794047..2795084 (-)
• Length: 345 a.a.
• NCBI ID: WP_007507996.1
• Uniprot ID: I4WYA7
• Organism: Rhodanobacter denitrificans
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2789047..2800084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R2APBS1_RS12800 (R2APBS1_2630)	csrA	2790278..2790481 (-)	204	WP_007508001.1	carbon storage regulator CsrA	-
R2APBS1_RS12805 (R2APBS1_2631)	alaS	2790751..2793393 (-)	2643	WP_015448233.1	alanine--tRNA ligase	-
R2APBS1_RS12810 (R2APBS1_2632)	-	2793478..2794014 (-)	537	WP_015448234.1	regulatory protein RecX	-
R2APBS1_RS12815 (R2APBS1_2633)	recA	2794047..2795084 (-)	1038	WP_007507996.1	recombinase RecA	Machinery gene
R2APBS1_RS12820 (R2APBS1_2634)	-	2795222..2795731 (-)	510	WP_015448235.1	CinA family protein	-
R2APBS1_RS12825 (R2APBS1_2635)	mutS	2795822..2798506 (+)	2685	WP_015448236.1	DNA mismatch repair protein MutS	-

Sequence

Protein

• Length: 345 a.a.
• Molecular weight: 37091.54 Da
• Isoelectric Point: 5.5718

>NTDB_id=57137 R2APBS1_RS12815 WP_007507996.1 2794047..2795084(-) (recA) [Rhodanobacter denitrificans]
MDDNKRKALTSALGQIEKQFGKGAVMRMGDRVNEAIETISTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTMTLQAIA
SCQRAGGTAAFIDAEHALDPTYAEKLGVKVDDLLVSQPDTGEQALEIADMLVRSGAVDMVVVDSVAALTPKAEIEGEMGD
SHVGLHARLMSQALRKLTANIKKSGCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKKGEEIIGSE
TRVKVVKNKVAPPFRQCEFEILYGEGTSREGEIIELGVAQNLIDKSGAWYSYNGDRIGQGKENVRQFLRDNPAIANEIDK
QLRERLLVPVGKPAPAAPEEALEEV

Nucleotide

• Length: 1038 bp

>NTDB_id=57137 R2APBS1_RS12815 WP_007507996.1 2794047..2795084(-) (recA) [Rhodanobacter denitrificans]
ATGGATGACAACAAGCGCAAGGCGCTCACCTCCGCCCTCGGCCAGATCGAAAAGCAGTTCGGCAAGGGCGCGGTCATGCG
CATGGGCGACCGCGTCAACGAGGCGATCGAGACGATCTCCACCGGCTCGCTGGGGCTGGACATCGCGCTCGGCGTCGGCG
GCCTGCCGCGCGGCCGCGTGGTCGAGATCTACGGCCCGGAATCGTCCGGCAAGACCACCATGACGCTGCAGGCGATCGCC
AGCTGCCAGCGCGCCGGCGGCACCGCCGCATTCATCGACGCCGAGCATGCGCTCGATCCCACTTACGCCGAAAAGCTCGG
CGTCAAGGTCGACGACCTGCTGGTATCGCAGCCGGATACCGGCGAGCAGGCGCTGGAAATCGCCGACATGCTGGTGCGCT
CGGGCGCGGTGGACATGGTGGTGGTCGACTCGGTGGCCGCGCTGACTCCGAAGGCCGAGATCGAGGGCGAGATGGGCGAC
TCCCACGTCGGCCTGCACGCCCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGCCAACATCAAGAAATCCGGCTGCCT
GGTGATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCCCGAGACCACCACCGGCGGCAACGCGC
TGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATCGGCGCGGTGAAGAAGGGCGAGGAGATCATCGGTTCGGAA
ACCCGCGTCAAGGTGGTCAAGAACAAGGTGGCGCCGCCGTTCCGCCAGTGCGAGTTCGAGATCCTGTACGGCGAGGGCAC
CTCGCGCGAGGGCGAGATCATCGAGCTGGGCGTGGCGCAGAACCTGATCGACAAGTCCGGCGCCTGGTACAGCTACAACG
GCGACCGCATCGGCCAGGGCAAGGAGAACGTGCGCCAGTTCCTGCGCGACAACCCGGCGATCGCCAACGAGATCGACAAG
CAGCTGCGCGAGCGCCTGCTGGTACCGGTCGGCAAGCCGGCCCCCGCCGCGCCGGAAGAGGCGCTCGAGGAAGTCTGA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-267)

3D structure

• AlphaFold DB: I4WYA7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Pseudomonas stutzeri DSM 10701	77.439	95.072	0.736
recA	Acinetobacter baylyi ADP1	73.837	99.71	0.736
recA	Ralstonia pseudosolanacearum GMI1000	72.434	98.841	0.716
recA	Acinetobacter baumannii D1279779	74.312	94.783	0.704
recA	Neisseria gonorrhoeae MS11	74.383	93.913	0.699
recA	Neisseria gonorrhoeae MS11	74.383	93.913	0.699
recA	Neisseria gonorrhoeae strain FA1090	74.383	93.913	0.699
recA	Vibrio cholerae O1 biovar El Tor strain E7946	72.644	95.362	0.693
recA	Vibrio cholerae strain A1552	72.644	95.362	0.693
recA	Glaesserella parasuis strain SC1401	70.062	93.913	0.658
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	66.055	94.783	0.626
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.955	95.942	0.623
recA	Helicobacter pylori strain NCTC11637	60.969	100	0.62
recA	Helicobacter pylori 26695	60.684	100	0.617
recA	Bacillus subtilis subsp. subtilis str. 168	65.217	93.333	0.609
recA	Streptococcus mutans UA159	62.769	94.203	0.591
recA	Streptococcus pyogenes NZ131	61.28	95.072	0.583
recA	Latilactobacillus sakei subsp. sakei 23K	61.994	93.043	0.577
recA	Streptococcus mitis SK321	57.681	100	0.577
recA	Streptococcus mitis NCTC 12261	60.991	93.623	0.571
recA	Streptococcus pneumoniae Rx1	60.429	94.493	0.571
recA	Streptococcus pneumoniae D39	60.429	94.493	0.571
recA	Streptococcus pneumoniae R6	60.429	94.493	0.571
recA	Streptococcus pneumoniae TIGR4	60.429	94.493	0.571
recA	Lactococcus lactis subsp. cremoris KW2	58.514	93.623	0.548
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	57.798	94.783	0.548