Detailed information NTG0056458

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: LILO_RS01710
• Genome accession: NC_020450
• Coordinates: 344858..346021 (+)
• Length: 387 a.a.
• NCBI ID: WP_042230065.1
• Uniprot ID: A0A3S4MDE8
• Organism: Lactococcus lactis subsp. lactis IO-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 339858..351021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LILO_RS01695 (lilo_0318)	era	341093..342004 (+)	912	WP_003131632.1	GTPase Era	-
LILO_RS01700 (lilo_0319)	asnB	342102..343694 (+)	1593	WP_015425812.1	asparagine synthase B	-
LILO_RS01705 (lilo_0320)	mutM	343887..344705 (+)	819	WP_015425813.1	DNA-formamidopyrimidine glycosylase	-
LILO_RS01710 (lilo_0321)	recA	344858..346021 (+)	1164	WP_042230065.1	recombinase RecA	Machinery gene
LILO_RS01715 (lilo_0322)	-	346034..347407 (-)	1374	WP_015425815.1	amino acid permease	-
LILO_RS01720 (lilo_0323)	-	347476..348855 (-)	1380	WP_042230067.1	amino acid permease	-
LILO_RS01725 (lilo_0324)	-	349002..349382 (+)	381	WP_015425817.1	YlbF family regulator	-
LILO_RS01730 (lilo_0325)	-	349369..349683 (+)	315	WP_162259447.1	YlbG family protein	-
LILO_RS01735 (lilo_0326)	-	349913..350431 (+)	519	WP_003131623.1	hypothetical protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 41477.31 Da
• Isoelectric Point: 5.1619

>NTDB_id=56458 LILO_RS01710 WP_042230065.1 344858..346021(+) (recA) [Lactococcus lactis subsp. lactis IO-1]
MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYG
PESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSV
AALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGA
EKAKNYLKEHQEIFDEIDHKVRAAHGLLDEAEVAETTEDTSTKAKTTKAKKEEKVVETEEIELELED

Nucleotide

• Length: 1164 bp

>NTDB_id=56458 LILO_RS01710 WP_042230065.1 344858..346021(+) (recA) [Lactococcus lactis subsp. lactis IO-1]
TTGGCAACAAAGAAAAAAACAAATTTTGATGATATTACCAAAAAATATGGCGCTGAACGTGACAAAGCTTTGGCAGATGC
ACTTGCTCTGATTGAAAAAGACTTTGGGAAAGGTTCACTTATGCGTCTTGGCGAAGCAGCCAACCAGAAAGTGTCAGTAG
TAAGTTCAGGCTCACTTGCACTTGATATTGCGCTTGGTGCAGGTGGATATCCTAAAGGACGTATCGTTGAAATCTACGGA
CCAGAATCTTCTGGTAAAACAACAGTCGCTCTTCATGCCGTTGCAGCGGTTCAAAAAGAAGGTGGAATTGCAGCCTTTAT
CGATGCTGAAAATGCGCTTGACCCAGAATATGCAAAAGCGCTCGGTGTCAATATCGATGAACTTTTACTTTCACAACCAG
ACTATGGTGAACAAGGGCTTCAAATTGCTGAAAAATTGATTACATCTGGTGCAGTTGACTTAGTTGTTATTGACTCAGTT
GCAGCTTTGGTACCTAAAGCCGAAATTGACGGTGAAATTGGTGACAGTTCAGTTGGGCTTCAAGCTCGTATGATGTCACA
AGCCATGCGTAAACTTGCAGGACATATTAATAAAACAAAAACAACAGCTATTTTCATCAACCAATTGCGTGAAAAAGTTG
GGGTTATGTTTGGTTCGCCAGAAACAACACCTGGTGGTCGTGCATTGAAATTCTACGCTTCTGTACGTCTTGATGTACGT
GGTTCAACAAAAATCGAAGAAGGTTCTGGAGATAACAAGACCCAAATCGGTAAAATCACAAAAATCAAAGTCGTTAAAAA
TAAAGTGGCTCCACCATTCAAGGTTGCTCTCGTAGATATCATGTTTGGTGAAGGGATTTCAAGAACCGGTGAACTTTTAA
ACATTGCTGTTGATGAAGGAATCATCAAAAAATCAGGCGCTTGGTTTGCTTACAATGACGAAAAAATTGGTCAAGGAGCA
GAAAAAGCGAAGAACTATCTCAAAGAACATCAAGAAATCTTTGATGAAATTGACCATAAAGTTCGTGCCGCTCACGGTCT
TCTTGATGAAGCAGAAGTAGCAGAAACTACAGAAGATACTTCAACAAAAGCTAAGACAACTAAAGCTAAAAAAGAAGAAA
AAGTAGTCGAAACTGAAGAAATTGAACTCGAACTTGAAGATTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (22-287)

3D structure

• AlphaFold DB: A0A3S4MDE8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Lactococcus lactis subsp. cremoris KW2	95.866	100	0.959
recA	Streptococcus pneumoniae D39	75.844	99.483	0.755
recA	Streptococcus pneumoniae R6	75.844	99.483	0.755
recA	Streptococcus pneumoniae TIGR4	75.844	99.483	0.755
recA	Streptococcus pneumoniae Rx1	75.844	99.483	0.755
recA	Streptococcus mitis NCTC 12261	74.805	99.483	0.744
recA	Streptococcus mitis SK321	74.286	99.483	0.739
recA	Streptococcus mutans UA159	73.698	99.225	0.731
recA	Streptococcus pyogenes NZ131	79.251	89.664	0.711
recA	Latilactobacillus sakei subsp. sakei 23K	69.298	88.372	0.612
recA	Bacillus subtilis subsp. subtilis str. 168	65.455	85.271	0.558
recA	Glaesserella parasuis strain SC1401	54.667	96.899	0.53
recA	Vibrio cholerae strain A1552	59.42	89.147	0.53
recA	Vibrio cholerae O1 biovar El Tor strain E7946	59.42	89.147	0.53
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	61.094	85.013	0.519
recA	Neisseria gonorrhoeae strain FA1090	60	85.271	0.512
recA	Neisseria gonorrhoeae MS11	60	85.271	0.512
recA	Neisseria gonorrhoeae MS11	60	85.271	0.512
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.509	84.238	0.501
recA	Acinetobacter baylyi ADP1	59.752	83.463	0.499
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.716	84.496	0.496
recA	Pseudomonas stutzeri DSM 10701	58.951	83.721	0.494
recA	Helicobacter pylori 26695	58.055	85.013	0.494
recA	Helicobacter pylori strain NCTC11637	58.055	85.013	0.494
recA	Acinetobacter baumannii D1279779	59.133	83.463	0.494
recA	Ralstonia pseudosolanacearum GMI1000	60.252	81.912	0.494