Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   KCV09_RS02750 Genome accession   NZ_CP073241
Coordinates   608333..609385 (-) Length   350 a.a.
NCBI ID   WP_025094874.1    Uniprot ID   A0A0M1I2S1
Organism   Acinetobacter soli strain M3-1-68     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 603333..614385
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCV09_RS02715 - 603647..604147 (+) 501 WP_151815218.1 OmpH family outer membrane protein -
  KCV09_RS02720 lpxD 604151..605221 (+) 1071 WP_212515487.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  KCV09_RS02725 fabZ 605228..605713 (+) 486 WP_025094871.1 3-hydroxyacyl-ACP dehydratase FabZ -
  KCV09_RS02730 lpxA 605710..606498 (+) 789 WP_004936813.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  KCV09_RS02735 - 606543..607388 (-) 846 WP_119026196.1 YbgF trimerization domain-containing protein -
  KCV09_RS02745 - 607803..608282 (-) 480 WP_111812341.1 regulatory protein RecX -
  KCV09_RS02750 recA 608333..609385 (-) 1053 WP_025094874.1 recombinase RecA Machinery gene
  KCV09_RS02755 - 609544..609987 (-) 444 WP_004936824.1 RNA-binding S4 domain-containing protein -
  KCV09_RS02760 - 610564..611424 (+) 861 WP_151815506.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  KCV09_RS02765 - 611481..612218 (+) 738 WP_151815507.1 histidine phosphatase family protein -
  KCV09_RS02770 rpsT 612286..612555 (-) 270 WP_004925626.1 30S ribosomal protein S20 -
  KCV09_RS02775 - 612764..613429 (+) 666 WP_151815508.1 NAD-dependent epimerase/dehydratase family protein -
  KCV09_RS02780 rraA 613442..613957 (+) 516 WP_004936834.1 ribonuclease E activity regulator RraA -

Sequence


Protein


Download         Length: 350 a.a.        Molecular weight: 37968.30 Da        Isoelectric Point: 5.0274

>NTDB_id=558386 KCV09_RS02750 WP_025094874.1 608333..609385(-) (recA) [Acinetobacter soli strain M3-1-68]
MDDNKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIENLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFREAIFQILYGKGVNQLGELVDLAVQQNIVQKAGAWYSYQGNKIGQGKNNVIRYFEENPSISAEIER
AIREQLLTKNTDPAAAHDDEPEEQPDFIES

Nucleotide


Download         Length: 1053 bp        

>NTDB_id=558386 KCV09_RS02750 WP_025094874.1 608333..609385(-) (recA) [Acinetobacter soli strain M3-1-68]
ATGGATGATAATAAAAGTAAGGCATTACAAGCTGCCTTAAGCCAGATTGAAAAACAGTTTGGTAAAAACACAGTTATGCG
CTTAGGCGACAATACCGTGCAAGCCGTTGAAGCTGTTTCTACAGGTTCGCTCACGCTTGATATTGCGCTTGGCATTGGAG
GTTTACCGAAGGGTCGTATTGTTGAAATTTACGGTCCTGAATCCTCAGGTAAAACCACCATGACATTACAGGCAATTGCT
CAATGTCAAAAATCTGGCGGTACATGTGCATTTATCGATGCAGAACATGCACTAGATCCTCAATACGCACGCAAGCTCGG
TGTTGATATTGAAAATCTTTTGGTTTCTCAGCCAGACAATGGTGAACAAGCCCTAGAAATCGCGGATATGCTGGTTCGCT
CGGGTGCGATTGATCTAATCGTGGTCGACTCGGTTGCCGCATTGACCCCAAAAGCTGAAATTGAAGGTGAAATGGGCGAC
TCACATATGGGCTTGCAAGCCCGCTTGATGAGTCAAGCGCTACGTAAAATTACGGGTAATGCCAAACGCTCTAATTGCAT
GGTGATCTTCATTAACCAAATTCGTATGAAGATTGGTGTAATGTTTGGAAGCCCTGAAACCACAACGGGCGGTAATGCAC
TTAAATTTTATGCATCTGTTCGATTGGATATCCGTCGTATTGGCCAAGTAAAAGAAGGTGACGAAATCGTCGGTTCTGAA
ACCAAAGTAAAAGTGGTTAAGAACAAAATGGCCCCTCCTTTTCGCGAAGCTATTTTCCAGATCCTGTACGGCAAAGGTGT
TAACCAGTTAGGTGAACTTGTCGATCTCGCAGTTCAACAAAATATTGTTCAAAAAGCAGGTGCTTGGTATTCATATCAAG
GCAACAAAATTGGACAAGGTAAAAATAACGTGATTCGTTATTTTGAGGAAAATCCAAGTATTTCGGCAGAAATTGAACGC
GCTATTCGCGAACAATTGCTGACCAAAAATACAGATCCAGCCGCTGCGCATGATGATGAGCCAGAAGAACAGCCCGACTT
TATTGAAAGTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0M1I2S1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

94.857

100

0.949

  recA Acinetobacter baumannii D1279779

93.103

99.429

0.926

  recA Pseudomonas stutzeri DSM 10701

74.925

95.714

0.717

  recA Vibrio cholerae strain A1552

73.089

93.429

0.683

  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.089

93.429

0.683

  recA Ralstonia pseudosolanacearum GMI1000

69.851

95.714

0.669

  recA Glaesserella parasuis strain SC1401

71.605

92.571

0.663

  recA Neisseria gonorrhoeae MS11

69.753

92.571

0.646

  recA Neisseria gonorrhoeae MS11

69.753

92.571

0.646

  recA Neisseria gonorrhoeae strain FA1090

69.753

92.571

0.646

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.209

98.286

0.611

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.772

95.429

0.609

  recA Helicobacter pylori strain NCTC11637

63.609

93.429

0.594

  recA Helicobacter pylori 26695

63.303

93.429

0.591

  recA Streptococcus mitis SK321

59.531

97.429

0.58

  recA Streptococcus pneumoniae Rx1

58.166

99.714

0.58

  recA Streptococcus pneumoniae D39

58.166

99.714

0.58

  recA Streptococcus pneumoniae R6

58.166

99.714

0.58

  recA Streptococcus pneumoniae TIGR4

58.166

99.714

0.58

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.654

92.571

0.58

  recA Bacillus subtilis subsp. subtilis str. 168

62.422

92

0.574

  recA Streptococcus mutans UA159

61.162

93.429

0.571

  recA Streptococcus pyogenes NZ131

61.231

92.857

0.569

  recA Streptococcus mitis NCTC 12261

61.043

93.143

0.569

  recA Lactococcus lactis subsp. cremoris KW2

58.514

92.286

0.54

  recA Latilactobacillus sakei subsp. sakei 23K

58.255

91.714

0.534