Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   J4G45_RS08425 Genome accession   NZ_CP071770
Coordinates   1557514..1558560 (+) Length   348 a.a.
NCBI ID   WP_004976691.1    Uniprot ID   A0A2A5PID7
Organism   Acinetobacter towneri strain GX5     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1552514..1563560
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4G45_RS08395 (J4G45_08400) - 1553135..1553869 (-) 735 WP_004976677.1 histidine phosphatase family protein -
  J4G45_RS08400 (J4G45_08405) - 1553927..1554784 (-) 858 WP_131261461.1 3'(2'),5'-bisphosphate nucleotidase CysQ family protein -
  J4G45_RS08405 (J4G45_08410) - 1554967..1555146 (-) 180 WP_004976682.1 hypothetical protein -
  J4G45_RS08410 (J4G45_08415) - 1555731..1555976 (-) 246 WP_004976684.1 hypothetical protein -
  J4G45_RS08415 (J4G45_08420) - 1556262..1556936 (+) 675 WP_096901429.1 HAD-IA family hydrolase -
  J4G45_RS08420 (J4G45_08425) - 1556929..1557369 (+) 441 WP_004976690.1 RNA-binding S4 domain-containing protein -
  J4G45_RS08425 (J4G45_08430) recA 1557514..1558560 (+) 1047 WP_004976691.1 recombinase RecA Machinery gene
  J4G45_RS08430 (J4G45_08435) - 1558641..1559330 (+) 690 WP_167845975.1 regulatory protein RecX -
  J4G45_RS08440 (J4G45_08445) - 1559835..1560681 (+) 847 Protein_1458 YbgF trimerization domain-containing protein -
  J4G45_RS08445 (J4G45_08450) lpxA 1560752..1561540 (-) 789 WP_004976696.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  J4G45_RS08450 (J4G45_08455) fabZ 1561537..1562025 (-) 489 WP_004976697.1 3-hydroxyacyl-ACP dehydratase FabZ -
  J4G45_RS08455 (J4G45_08460) lpxD 1562028..1563098 (-) 1071 WP_167845974.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 37679.15 Da        Isoelectric Point: 5.0394

>NTDB_id=547631 J4G45_RS08425 WP_004976691.1 1557514..1558560(+) (recA) [Acinetobacter towneri strain GX5]
MDENKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDMIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIIGSE
TKVKVVKNKMAPPFKEALFQILYGKGVNHLGELVDLAVQQNIVQKAGAWYSYQGDKIGQGKNNTIRHLEEHPELAKGIEA
IIREQLLTTGQAAPVEDKDEEEFDLLDV

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=547631 J4G45_RS08425 WP_004976691.1 1557514..1558560(+) (recA) [Acinetobacter towneri strain GX5]
ATGGATGAGAATAAAAGCAAGGCGTTAAACGCTGCGTTAAGCCAGATTGAAAAACAATTTGGTAAGAACACAGTCATGCG
TCTTGGTGACAACACTGTGCAAGCGGTAGAAGCCGTATCTACAGGCTCATTGACCCTAGATATTGCATTGGGTATTGGTG
GCTTACCTAAAGGTCGTATCATTGAAATTTACGGCCCTGAATCATCAGGTAAAACGACTATGACCTTGCAAGCCATTGCA
GAATGTCAAAAAGCTGGTGGAACTTGTGCCTTTATTGATGCCGAACACGCGCTTGATCCTCAATATGCACGTAAACTTGG
TGTAGATATTGACAATCTTTTAGTATCGCAACCAGACAACGGTGAACAAGCCCTTGAAATTGCCGATATGTTGGTACGTT
CTGGCGCAATTGACATGATTGTAGTCGACTCCGTGGCTGCCTTAACCCCTCGCGCCGAGATTGAGGGTGAAATGGGTGAT
TCACACATGGGCTTACAAGCGCGCTTAATGAGCCAAGCCTTGCGTAAAATCACAGGTAATGCCAAACGTTCGAACTGTAT
GGTGATCTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCAGAAACCACAACTGGCGGTAACGCAT
TGAAGTTCTATGCTTCTGTTCGTTTAGATATTCGCCGTGTAGGTCAGGTGAAAGAAGGCGACGAGATTATTGGTTCTGAA
ACCAAAGTCAAAGTTGTGAAAAACAAAATGGCGCCTCCATTTAAAGAAGCATTGTTCCAGATTCTTTACGGTAAAGGCGT
TAACCATTTGGGCGAGCTGGTCGATTTGGCTGTTCAACAAAATATCGTGCAAAAAGCAGGTGCTTGGTATTCTTATCAAG
GCGATAAAATTGGTCAAGGTAAAAACAACACCATTCGCCACCTTGAAGAACATCCAGAGCTTGCTAAAGGCATCGAAGCG
ATTATTCGTGAACAACTGCTCACGACAGGTCAAGCAGCACCTGTAGAAGATAAAGACGAAGAAGAATTCGACTTACTTGA
TGTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2A5PID7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baumannii D1279779

91.04

99.425

0.905

  recA Acinetobacter baylyi ADP1

90.23

100

0.902

  recA Pseudomonas stutzeri DSM 10701

73.529

97.701

0.718

  recA Vibrio cholerae strain A1552

73.7

93.966

0.693

  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.7

93.966

0.693

  recA Glaesserella parasuis strain SC1401

71.605

93.103

0.667

  recA Ralstonia pseudosolanacearum GMI1000

70.755

91.379

0.647

  recA Neisseria gonorrhoeae MS11

67.593

93.103

0.629

  recA Neisseria gonorrhoeae MS11

67.593

93.103

0.629

  recA Neisseria gonorrhoeae strain FA1090

67.593

93.103

0.629

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.682

98.563

0.618

  recA Helicobacter pylori strain NCTC11637

61.739

99.138

0.612

  recA Helicobacter pylori 26695

61.449

99.138

0.609

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

64.048

95.115

0.609

  recA Streptococcus mitis SK321

60.117

97.989

0.589

  recA Streptococcus mitis NCTC 12261

59.824

97.989

0.586

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.27

93.678

0.583

  recA Streptococcus mutans UA159

61.89

94.253

0.583

  recA Streptococcus pyogenes NZ131

61.846

93.391

0.578

  recA Streptococcus pneumoniae Rx1

61.656

93.678

0.578

  recA Streptococcus pneumoniae D39

61.656

93.678

0.578

  recA Streptococcus pneumoniae R6

61.656

93.678

0.578

  recA Streptococcus pneumoniae TIGR4

61.656

93.678

0.578

  recA Bacillus subtilis subsp. subtilis str. 168

61.801

92.529

0.572

  recA Latilactobacillus sakei subsp. sakei 23K

58.16

96.839

0.563

  recA Lactococcus lactis subsp. cremoris KW2

58.824

92.816

0.546