Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | JQL77_RS16725 | Genome accession | NZ_CP071025 |
| Coordinates | 3526554..3527612 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain RIVM_C010068 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3489408..3530083 | 3526554..3527612 | within | 0 |
Gene organization within MGE regions
Location: 3489408..3530083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQL77_RS16515 (JQL77_16515) | - | 3489408..3490295 (-) | 888 | WP_022649115.1 | LysR substrate-binding domain-containing protein | - |
| JQL77_RS16520 (JQL77_16520) | - | 3490393..3490995 (+) | 603 | WP_022649116.1 | short chain dehydrogenase | - |
| JQL77_RS16525 (JQL77_16525) | - | 3490992..3491723 (-) | 732 | WP_022649117.1 | class I SAM-dependent methyltransferase | - |
| JQL77_RS16530 (JQL77_16530) | - | 3491849..3493228 (-) | 1380 | WP_022649118.1 | amidohydrolase family protein | - |
| JQL77_RS16535 (JQL77_16535) | - | 3493230..3494186 (-) | 957 | WP_022649119.1 | carbamate kinase family protein | - |
| JQL77_RS16540 (JQL77_16540) | - | 3494183..3495763 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| JQL77_RS16545 (JQL77_16545) | - | 3495775..3497190 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| JQL77_RS16550 (JQL77_16550) | fdrA | 3497190..3498731 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| JQL77_RS16555 (JQL77_16555) | - | 3498840..3499445 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| JQL77_RS16560 (JQL77_16560) | - | 3499766..3500695 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| JQL77_RS16565 (JQL77_16565) | - | 3500692..3500850 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| JQL77_RS16570 (JQL77_16570) | - | 3501030..3501548 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| JQL77_RS16575 (JQL77_16575) | - | 3501631..3501810 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| JQL77_RS16580 (JQL77_16580) | stpA | 3501848..3502252 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| JQL77_RS16585 (JQL77_16585) | alaE | 3502750..3503199 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| JQL77_RS16590 (JQL77_16590) | - | 3503232..3503576 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| JQL77_RS16595 (JQL77_16595) | - | 3503735..3504061 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| JQL77_RS16600 (JQL77_16600) | nrdH | 3504305..3504544 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| JQL77_RS16605 (JQL77_16605) | nrdI | 3504541..3504951 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| JQL77_RS16610 (JQL77_16610) | nrdE | 3504924..3507068 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| JQL77_RS16615 (JQL77_16615) | nrdF | 3507078..3508037 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| JQL77_RS16620 (JQL77_16620) | proV | 3508371..3509573 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| JQL77_RS16625 (JQL77_16625) | proW | 3509566..3510630 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| JQL77_RS16630 (JQL77_16630) | proX | 3510640..3511635 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| JQL77_RS16635 (JQL77_16635) | - | 3511845..3513029 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| JQL77_RS16640 (JQL77_16640) | emrR | 3513344..3513874 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| JQL77_RS16645 (JQL77_16645) | emrA | 3514003..3515175 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| JQL77_RS16650 (JQL77_16650) | emrB | 3515192..3516739 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| JQL77_RS16655 (JQL77_16655) | - | 3516824..3517930 (-) | 1107 | WP_226860881.1 | DDE-type integrase/transposase/recombinase | - |
| JQL77_RS23540 | - | 3518241..3518384 (+) | 144 | Protein_3280 | hypothetical protein | - |
| JQL77_RS16665 (JQL77_16665) | luxS | 3518446..3518961 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| JQL77_RS16670 (JQL77_16670) | gshA | 3519114..3520658 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| JQL77_RS16675 (JQL77_16675) | - | 3520742..3521170 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| JQL77_RS16680 (JQL77_16680) | yqaB | 3521167..3521733 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| JQL77_RS16710 (JQL77_16710) | csrA | 3522799..3522984 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| JQL77_RS16715 (JQL77_16715) | alaS | 3523226..3525853 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| JQL77_RS16720 (JQL77_16720) | recX | 3525985..3526485 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| JQL77_RS16725 (JQL77_16725) | recA | 3526554..3527612 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
| JQL77_RS16730 (JQL77_16730) | pncC | 3527702..3528199 (-) | 498 | WP_003862172.1 | nicotinamide-nucleotide amidase | - |
| JQL77_RS16735 (JQL77_16735) | - | 3528330..3529208 (-) | 879 | WP_022649141.1 | metal ABC transporter substrate-binding protein | - |
| JQL77_RS16740 (JQL77_16740) | - | 3529223..3530083 (-) | 861 | WP_022649142.1 | metal ABC transporter permease | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=542371 JQL77_RS16725 WP_022649140.1 3526554..3527612(-) (recA) [Enterobacter hormaechei strain RIVM_C010068]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=542371 JQL77_RS16725 WP_022649140.1 3526554..3527612(-) (recA) [Enterobacter hormaechei strain RIVM_C010068]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.