Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | JQL74_RS16745 | Genome accession | NZ_CP071019 |
| Coordinates | 3530336..3531394 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain RIVM_C017834 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3472690..3541070 | 3530336..3531394 | within | 0 |
Gene organization within MGE regions
Location: 3472690..3541070
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JQL74_RS16490 (JQL74_16490) | - | 3472690..3473607 (+) | 918 | WP_022649106.1 | LysR family transcriptional regulator | - |
| JQL74_RS16495 (JQL74_16495) | - | 3474502..3485301 (+) | 10800 | WP_058671108.1 | BapA/Bap/LapF family large adhesin | - |
| JQL74_RS16500 (JQL74_16500) | - | 3485384..3486787 (+) | 1404 | WP_022649108.1 | TolC family outer membrane protein | - |
| JQL74_RS16505 (JQL74_16505) | - | 3486784..3488976 (+) | 2193 | WP_022649109.1 | type I secretion system permease/ATPase | - |
| JQL74_RS16510 (JQL74_16510) | - | 3488957..3490156 (+) | 1200 | WP_022649110.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| JQL74_RS16515 (JQL74_16515) | nudI | 3490290..3490715 (+) | 426 | WP_022649111.1 | nucleoside triphosphatase NudI | - |
| JQL74_RS16520 (JQL74_16520) | - | 3490687..3491418 (-) | 732 | WP_022649112.1 | helix-turn-helix domain-containing protein | - |
| JQL74_RS16525 (JQL74_16525) | - | 3491514..3491933 (+) | 420 | WP_022649113.1 | nuclear transport factor 2 family protein | - |
| JQL74_RS16530 (JQL74_16530) | - | 3491988..3493169 (-) | 1182 | WP_022649114.1 | PLP-dependent aminotransferase family protein | - |
| JQL74_RS16535 (JQL74_16535) | - | 3493190..3494077 (-) | 888 | WP_022649115.1 | LysR substrate-binding domain-containing protein | - |
| JQL74_RS16540 (JQL74_16540) | - | 3494175..3494777 (+) | 603 | WP_022649116.1 | short chain dehydrogenase | - |
| JQL74_RS16545 (JQL74_16545) | - | 3494774..3495505 (-) | 732 | WP_022649117.1 | class I SAM-dependent methyltransferase | - |
| JQL74_RS16550 (JQL74_16550) | - | 3495631..3497010 (-) | 1380 | WP_022649118.1 | amidohydrolase family protein | - |
| JQL74_RS16555 (JQL74_16555) | - | 3497012..3497968 (-) | 957 | WP_022649119.1 | carbamate kinase family protein | - |
| JQL74_RS16560 (JQL74_16560) | - | 3497965..3499545 (-) | 1581 | WP_022649120.1 | hypothetical protein | - |
| JQL74_RS16565 (JQL74_16565) | - | 3499557..3500972 (-) | 1416 | WP_022649121.1 | DUF1116 domain-containing protein | - |
| JQL74_RS16570 (JQL74_16570) | fdrA | 3500972..3502513 (-) | 1542 | WP_023330176.1 | acyl-CoA synthetase FdrA | - |
| JQL74_RS16575 (JQL74_16575) | - | 3502622..3503227 (-) | 606 | WP_022649123.1 | ankyrin repeat domain-containing protein | - |
| JQL74_RS16580 (JQL74_16580) | - | 3503548..3504477 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| JQL74_RS16585 (JQL74_16585) | - | 3504474..3504632 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| JQL74_RS16590 (JQL74_16590) | - | 3504812..3505330 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| JQL74_RS16595 (JQL74_16595) | - | 3505413..3505592 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| JQL74_RS16600 (JQL74_16600) | stpA | 3505630..3506034 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| JQL74_RS16605 (JQL74_16605) | alaE | 3506532..3506981 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| JQL74_RS16610 (JQL74_16610) | - | 3507014..3507358 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| JQL74_RS16615 (JQL74_16615) | - | 3507517..3507843 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| JQL74_RS16620 (JQL74_16620) | nrdH | 3508087..3508326 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| JQL74_RS16625 (JQL74_16625) | nrdI | 3508323..3508733 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| JQL74_RS16630 (JQL74_16630) | nrdE | 3508706..3510850 (+) | 2145 | WP_022649129.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| JQL74_RS16635 (JQL74_16635) | nrdF | 3510860..3511819 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| JQL74_RS16640 (JQL74_16640) | proV | 3512153..3513355 (+) | 1203 | WP_022649131.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| JQL74_RS16645 (JQL74_16645) | proW | 3513348..3514412 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| JQL74_RS16650 (JQL74_16650) | proX | 3514422..3515417 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| JQL74_RS16655 (JQL74_16655) | - | 3515627..3516811 (+) | 1185 | WP_017692795.1 | MFS transporter | - |
| JQL74_RS16660 (JQL74_16660) | emrR | 3517126..3517656 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| JQL74_RS16665 (JQL74_16665) | emrA | 3517785..3518957 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| JQL74_RS16670 (JQL74_16670) | emrB | 3518974..3520521 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| JQL74_RS16675 (JQL74_16675) | - | 3520606..3521712 (-) | 1107 | WP_080396517.1 | DDE-type integrase/transposase/recombinase | - |
| JQL74_RS24275 | - | 3522023..3522166 (+) | 144 | Protein_3284 | hypothetical protein | - |
| JQL74_RS16685 (JQL74_16685) | luxS | 3522228..3522743 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| JQL74_RS16690 (JQL74_16690) | gshA | 3522896..3524440 (-) | 1545 | WP_022649137.1 | glutamate--cysteine ligase | - |
| JQL74_RS16695 (JQL74_16695) | - | 3524524..3524952 (-) | 429 | WP_017692791.1 | YqaA family protein | - |
| JQL74_RS16700 (JQL74_16700) | yqaB | 3524949..3525515 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| JQL74_RS16730 (JQL74_16730) | csrA | 3526581..3526766 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| JQL74_RS16735 (JQL74_16735) | alaS | 3527008..3529635 (-) | 2628 | WP_022649139.1 | alanine--tRNA ligase | - |
| JQL74_RS16740 (JQL74_16740) | recX | 3529767..3530267 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| JQL74_RS16745 (JQL74_16745) | recA | 3530336..3531394 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
| JQL74_RS16750 (JQL74_16750) | pncC | 3531484..3531981 (-) | 498 | WP_003862172.1 | nicotinamide-nucleotide amidase | - |
| JQL74_RS16755 (JQL74_16755) | - | 3532112..3532990 (-) | 879 | WP_022649141.1 | metal ABC transporter substrate-binding protein | - |
| JQL74_RS16760 (JQL74_16760) | - | 3533005..3533865 (-) | 861 | WP_022649142.1 | metal ABC transporter permease | - |
| JQL74_RS16765 (JQL74_16765) | - | 3533862..3534515 (-) | 654 | WP_022649143.1 | metal ABC transporter ATP-binding protein | - |
| JQL74_RS16770 (JQL74_16770) | mltB | 3534784..3535884 (-) | 1101 | WP_022649145.1 | lytic murein transglycosylase B | - |
| JQL74_RS16775 (JQL74_16775) | srlA | 3536136..3536699 (+) | 564 | WP_003862164.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| JQL74_RS16780 (JQL74_16780) | srlE | 3536696..3537655 (+) | 960 | WP_022649146.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| JQL74_RS16785 (JQL74_16785) | srlB | 3537668..3538030 (+) | 363 | WP_022649147.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| JQL74_RS16790 (JQL74_16790) | srlD | 3538045..3538824 (+) | 780 | WP_022649148.1 | sorbitol-6-phosphate dehydrogenase | - |
| JQL74_RS16795 (JQL74_16795) | gutM | 3538916..3539275 (+) | 360 | WP_022649149.1 | transcriptional regulator GutM | - |
| JQL74_RS16800 (JQL74_16800) | srlR | 3539339..3540112 (+) | 774 | WP_015571676.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| JQL74_RS16805 (JQL74_16805) | gutQ | 3540105..3541070 (+) | 966 | WP_022649150.1 | arabinose-5-phosphate isomerase GutQ | - |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=542305 JQL74_RS16745 WP_022649140.1 3530336..3531394(-) (recA) [Enterobacter hormaechei strain RIVM_C017834]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=542305 JQL74_RS16745 WP_022649140.1 3530336..3531394(-) (recA) [Enterobacter hormaechei strain RIVM_C017834]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGATGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCCCAGCCGGATACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCAGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAGTTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.