Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | JW980_RS06890 | Genome accession | NZ_CP070866 |
| Coordinates | 1384478..1385521 (-) | Length | 347 a.a. |
| NCBI ID | WP_005401034.1 | Uniprot ID | A0A1T1JM42 |
| Organism | Acinetobacter johnsonii strain XY27 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1382797..1394521 | 1384478..1385521 | within | 0 |
Gene organization within MGE regions
Location: 1382797..1394521
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JW980_RS06880 (JW980_06880) | - | 1382869..1383657 (+) | 789 | WP_224468929.1 | hypothetical protein | - |
| JW980_RS06885 (JW980_06885) | - | 1383767..1384372 (-) | 606 | WP_205667934.1 | regulatory protein RecX | - |
| JW980_RS06890 (JW980_06890) | recA | 1384478..1385521 (-) | 1044 | WP_005401034.1 | recombinase RecA | Machinery gene |
| JW980_RS06895 (JW980_06895) | - | 1385636..1386079 (-) | 444 | WP_004696588.1 | RNA-binding S4 domain-containing protein | - |
| JW980_RS06900 (JW980_06900) | - | 1386072..1386746 (-) | 675 | WP_005401036.1 | HAD-IA family hydrolase | - |
| JW980_RS18220 | - | 1387223..1387351 (+) | 129 | WP_262470803.1 | hypothetical protein | - |
| JW980_RS06905 (JW980_06905) | - | 1387406..1387651 (+) | 246 | WP_205667935.1 | hypothetical protein | - |
| JW980_RS06910 (JW980_06910) | - | 1387970..1388221 (+) | 252 | WP_125273307.1 | hypothetical protein | - |
| JW980_RS06915 (JW980_06915) | - | 1388720..1389574 (+) | 855 | WP_205667936.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| JW980_RS06920 (JW980_06920) | - | 1389629..1390360 (+) | 732 | WP_004696597.1 | histidine phosphatase family protein | - |
| JW980_RS06925 (JW980_06925) | - | 1390495..1390935 (-) | 441 | WP_058869816.1 | hypothetical protein | - |
| JW980_RS06930 (JW980_06930) | - | 1391404..1394019 (+) | 2616 | WP_205668109.1 | M66 family metalloprotease | - |
| JW980_RS06935 (JW980_06935) | rpsT | 1394255..1394521 (-) | 267 | WP_004696602.1 | 30S ribosomal protein S20 | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 37602.01 Da Isoelectric Point: 5.0433
>NTDB_id=541147 JW980_RS06890 WP_005401034.1 1384478..1385521(-) (recA) [Acinetobacter johnsonii strain XY27]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
ECQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFREALFQILYGKGVNHLGELVDLAVQQEIVQKAGAWYSYQGDKIGQGKNNVIRHLEENPQLAETIEK
IIREKLLTTANAAPVEENEEEPDFLDA
Nucleotide
Download Length: 1044 bp
>NTDB_id=541147 JW980_RS06890 WP_005401034.1 1384478..1385521(-) (recA) [Acinetobacter johnsonii strain XY27]
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAACAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACTGGTTCTTTGACACTTGATATTGCTCTAGGCATTGGCG
GCTTACCGAAGGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGTAAAACAACCATGACTTTACAAGCGATTGCT
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACACGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGACAACCTCTTGGTTTCTCAACCTGACCATGGTGAGCAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCCATTGACCTCATCGTTGTCGACTCTGTTGCAGCATTGACACCACGTGCGGAAATTGAAGGTGAAATGGGCGAC
TCGCACATGGGCCTCCAAGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGCTCAAACTGTAT
GGTGATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACCACGACTGGTGGTAATGCGT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGCCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTGAAAGTGGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCGCTCTTCCAAATTTTATATGGTAAAGGCGT
CAACCACTTGGGCGAACTTGTAGACTTGGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GTGATAAAATTGGTCAAGGTAAAAACAATGTGATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACTGCAAACGCTGCACCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA
ATGGATGATAATAAAAGCAAGGCGCTCAATGCTGCGCTAAGCCAAATTGAAAAACAGTTTGGTAAAAACACAGTAATGCG
TCTTGGCGATAACACCGTACAAGCTGTTGAAGCGGTATCAACTGGTTCTTTGACACTTGATATTGCTCTAGGCATTGGCG
GCTTACCGAAGGGTCGTATCGTTGAGATTTATGGTCCTGAATCTTCAGGTAAAACAACCATGACTTTACAAGCGATTGCT
GAATGTCAAAAAGCAGGTGGTACATGTGCATTTATCGATGCAGAACACGCTTTAGACCCACAGTATGCGCGTAAACTTGG
CGTAGATATTGACAACCTCTTGGTTTCTCAACCTGACCATGGTGAGCAAGCACTTGAAATTGCAGACATGCTGGTTCGCT
CTGGTGCCATTGACCTCATCGTTGTCGACTCTGTTGCAGCATTGACACCACGTGCGGAAATTGAAGGTGAAATGGGCGAC
TCGCACATGGGCCTCCAAGCACGTTTAATGAGCCAAGCATTACGTAAAATTACAGGTAATGCAAAACGCTCAAACTGTAT
GGTGATTTTCATTAACCAAATTCGTATGAAAATTGGTGTAATGTTTGGTAGCCCTGAAACCACGACTGGTGGTAATGCGT
TGAAATTCTATGCGTCTGTGCGTTTAGACATTCGCCGCGTAGGTCAGGTCAAAGAAGGCGATGAAATCGTTGGTTCTGAA
ACCAAAGTGAAAGTGGTCAAAAACAAAATGGCACCTCCATTCCGCGAAGCGCTCTTCCAAATTTTATATGGTAAAGGCGT
CAACCACTTGGGCGAACTTGTAGACTTGGCTGTTCAACAAGAAATCGTACAAAAAGCAGGTGCTTGGTATTCATACCAAG
GTGATAAAATTGGTCAAGGTAAAAACAATGTGATCCGTCACCTTGAAGAAAACCCTCAGTTGGCTGAAACCATTGAGAAA
ATCATTCGAGAAAAACTACTGACGACTGCAAACGCTGCACCTGTAGAAGAGAATGAAGAAGAGCCAGACTTTTTAGATGC
TTAA
Similar proteins
Only experimentally validated proteins are listed.