Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | JVX96_RS05295 | Genome accession | NZ_CP070343 |
| Coordinates | 1086744..1087850 (-) | Length | 368 a.a. |
| NCBI ID | WP_081268704.1 | Uniprot ID | - |
| Organism | Variovorax sp. PDNC026 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1081744..1092850
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JVX96_RS05260 (JVX96_05260) | - | 1081754..1082437 (+) | 684 | WP_106936363.1 | amino acid ABC transporter permease | - |
| JVX96_RS05265 (JVX96_05265) | - | 1082463..1083110 (+) | 648 | WP_106936362.1 | amino acid ABC transporter permease | - |
| JVX96_RS05270 (JVX96_05270) | - | 1083094..1083822 (+) | 729 | WP_081268709.1 | amino acid ABC transporter ATP-binding protein | - |
| JVX96_RS05275 (JVX96_05275) | - | 1083873..1084694 (+) | 822 | WP_106936361.1 | transporter substrate-binding domain-containing protein | - |
| JVX96_RS05280 (JVX96_05280) | - | 1084700..1085809 (+) | 1110 | WP_106936360.1 | mandelate racemase/muconate lactonizing enzyme family protein | - |
| JVX96_RS05285 (JVX96_05285) | - | 1085819..1086253 (-) | 435 | WP_081268706.1 | polyketide cyclase | - |
| JVX96_RS05290 (JVX96_05290) | recX | 1086234..1086695 (-) | 462 | WP_081268705.1 | recombination regulator RecX | - |
| JVX96_RS05295 (JVX96_05295) | recA | 1086744..1087850 (-) | 1107 | WP_081268704.1 | recombinase RecA | Machinery gene |
| JVX96_RS05300 (JVX96_05300) | - | 1087995..1088480 (+) | 486 | WP_106936359.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| JVX96_RS05305 (JVX96_05305) | - | 1088553..1089227 (+) | 675 | WP_081268702.1 | response regulator transcription factor | - |
| JVX96_RS05310 (JVX96_05310) | - | 1089265..1090707 (+) | 1443 | WP_081268700.1 | sensor histidine kinase | - |
| JVX96_RS05315 (JVX96_05315) | - | 1090717..1090959 (-) | 243 | WP_106936358.1 | sporulation protein | - |
| JVX96_RS05320 (JVX96_05320) | - | 1090973..1091785 (-) | 813 | WP_106936357.1 | biotin--[acetyl-CoA-carboxylase] ligase | - |
| JVX96_RS05325 (JVX96_05325) | - | 1091788..1092420 (-) | 633 | WP_106936356.1 | SET domain-containing protein-lysine N-methyltransferase | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39171.00 Da Isoelectric Point: 5.3886
>NTDB_id=539253 JVX96_RS05295 WP_081268704.1 1086744..1087850(-) (recA) [Variovorax sp. PDNC026]
MDAVVKGASISVANSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPE
SSGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAA
LTPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI
GTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVTAKIVDKSGAWYAYNGEKIGQGRDNAREF
LRENPELSREIENKVRESLGIPLLAADAGSTPEKPQKAAKAEKADKGE
MDAVVKGASISVANSEKAKALQAALAQIEKQFGKGTIMRLGEGEALEDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPE
SSGKTTLTLQVIAAMQKQAGTCAFVDAEHALDVQYAQKLGVNLSDLLISQPDTGEQALEIVDSLVRSGAVDLIVVDSVAA
LTPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKKTNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI
GTIKKGDEAIGNETKVKVVKNKVSPPFKTAEFDILFGEGISREGEIIDMGVTAKIVDKSGAWYAYNGEKIGQGRDNAREF
LRENPELSREIENKVRESLGIPLLAADAGSTPEKPQKAAKAEKADKGE
Nucleotide
Download Length: 1107 bp
>NTDB_id=539253 JVX96_RS05295 WP_081268704.1 1086744..1087850(-) (recA) [Variovorax sp. PDNC026]
ATGGACGCAGTCGTCAAGGGCGCAAGCATCTCGGTCGCCAACAGTGAAAAAGCCAAGGCGCTGCAAGCCGCGCTGGCCCA
GATCGAAAAGCAGTTCGGCAAGGGCACGATCATGCGGCTCGGCGAAGGCGAGGCGCTGGAAGACATCCAGGTGGTCTCCA
CCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTCATCGAAATCTACGGCCCTGAA
TCCTCGGGCAAGACCACGCTCACGCTGCAGGTCATCGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGC
AGAACACGCCCTCGACGTGCAATACGCCCAGAAGCTCGGCGTCAACCTGTCCGACCTGCTGATCAGCCAGCCCGACACCG
GCGAACAGGCCCTCGAAATCGTCGATTCGCTGGTGCGCTCCGGCGCGGTGGACCTGATCGTGGTCGACTCGGTCGCCGCG
CTCACGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCT
GCGCAAGCTCACCGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGA
TGTTCGGTTCGCCCGAAACCACCACTGGCGGCAATGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATC
GGCACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCCCCGTT
CAAGACGGCGGAGTTCGACATCCTGTTCGGCGAAGGCATCAGCCGCGAAGGCGAGATCATCGACATGGGCGTGACCGCCA
AGATCGTCGACAAGTCGGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTC
CTGCGCGAGAACCCCGAGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCATTCCGCTGCTGGCAGCCGA
TGCCGGCTCCACGCCCGAGAAGCCGCAGAAGGCCGCCAAGGCCGAGAAGGCGGACAAGGGCGAGTAA
ATGGACGCAGTCGTCAAGGGCGCAAGCATCTCGGTCGCCAACAGTGAAAAAGCCAAGGCGCTGCAAGCCGCGCTGGCCCA
GATCGAAAAGCAGTTCGGCAAGGGCACGATCATGCGGCTCGGCGAAGGCGAGGCGCTGGAAGACATCCAGGTGGTCTCCA
CCGGTTCGCTGGGCCTGGACATCGCGCTGGGCGTCGGCGGCCTGCCGCGCGGCCGCGTCATCGAAATCTACGGCCCTGAA
TCCTCGGGCAAGACCACGCTCACGCTGCAGGTCATCGCCGCCATGCAGAAGCAGGCCGGCACCTGCGCCTTCGTCGACGC
AGAACACGCCCTCGACGTGCAATACGCCCAGAAGCTCGGCGTCAACCTGTCCGACCTGCTGATCAGCCAGCCCGACACCG
GCGAACAGGCCCTCGAAATCGTCGATTCGCTGGTGCGCTCCGGCGCGGTGGACCTGATCGTGGTCGACTCGGTCGCCGCG
CTCACGCCCAAGGCCGAAATCGAAGGCGAAATGGGCGACTCGCTGCCCGGCCTGCAGGCCCGCCTGATGAGCCAGGCGCT
GCGCAAGCTCACCGCCACCATCAAGAAGACCAACTGCATGGTCATCTTCATCAACCAGATCCGCATGAAGATCGGCGTGA
TGTTCGGTTCGCCCGAAACCACCACTGGCGGCAATGCGCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCGCCGCATC
GGCACCATCAAGAAGGGCGACGAGGCCATCGGCAACGAAACCAAGGTGAAGGTGGTGAAGAACAAGGTCTCGCCCCCGTT
CAAGACGGCGGAGTTCGACATCCTGTTCGGCGAAGGCATCAGCCGCGAAGGCGAGATCATCGACATGGGCGTGACCGCCA
AGATCGTCGACAAGTCGGGCGCCTGGTACGCCTACAACGGCGAGAAGATCGGCCAGGGCCGCGACAACGCCCGCGAGTTC
CTGCGCGAGAACCCCGAGCTGTCGCGCGAGATCGAGAACAAGGTGCGCGAGTCGCTGGGCATTCCGCTGCTGGCAGCCGA
TGCCGGCTCCACGCCCGAGAAGCCGCAGAAGGCCGCCAAGGCCGAGAAGGCGGACAAGGGCGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.