Detailed information NTG0053667

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: C270_RS02600
• Genome accession: NC_018673
• Coordinates: 495104..496246 (+)
• Length: 380 a.a.
• NCBI ID: WP_014974002.1
• Uniprot ID: K0D677
• Organism: Leuconostoc carnosum JB16
• Function: homologous recombination (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	495104..504135	495104..496246	within	0

Gene organization within MGE regions

Location: 495104..504135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C270_RS02600 (C270_02380)	recA	495104..496246 (+)	1143	WP_014974002.1	recombinase RecA	Machinery gene
C270_RS02605 (C270_02385)	-	496358..497050 (+)	693	WP_014974003.1	response regulator transcription factor	-
C270_RS02610 (C270_02390)	-	497226..498140 (+)	915	WP_014974004.1	phosphate ABC transporter substrate-binding protein	-
C270_RS02620 (C270_02400)	-	498210..499575 (+)	1366	Protein_479	ATP-binding protein	-
C270_RS02625 (C270_02405)	-	499673..500554 (+)	882	WP_014974007.1	phosphate ABC transporter substrate-binding protein PstS family protein	-
C270_RS02630 (C270_02410)	pstC	500647..501570 (+)	924	WP_014974008.1	phosphate ABC transporter permease subunit PstC	-
C270_RS02635 (C270_02415)	pstA	501570..502454 (+)	885	WP_014974009.1	phosphate ABC transporter permease PstA	-
C270_RS02640 (C270_02420)	pstB	502529..503368 (+)	840	WP_041773190.1	phosphate ABC transporter ATP-binding protein PstB	-
C270_RS02645 (C270_02425)	pstB	503365..504135 (+)	771	WP_014974011.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 40874.31 Da
• Isoelectric Point: 4.6746

>NTDB_id=53667 C270_RS02600 WP_014974002.1 495104..496246(+) (recA) [Leuconostoc carnosum JB16]
MVTKKTTKKEDKENQAKGRKAALDEALKKIEKNFGKGSVMLLGENATTQVDTYPSGSVKLDVALGVGGYPKGRIIEIYGP
ESSGKTTLALHAVAEVQKAGGTAAYIDAENALDVKYAEALGIHKDELLLSQPDTGEQGLEIADALVQSGAVDIIVIDSVA
ALVPRAEIEGEMGDAHVGLQARLMSQALRKLAGTLNRTGTIAIFINQIREKIGVMFGNPETTPGGRALKFYSTIRLEVRR
STQIKDGTDVTGNLTKVKVVKNKVAPPFKVAEVDIMYGKGISQTGEILDLGADTEIIRKAGAFYYYDDVKIGQGREKAKE
FLDSPENAEMRQEIYAKVRDIFGIGDGSTTEVAPETEESVDEPDTLDLGNNDDLTDEPIV

Nucleotide

• Length: 1143 bp

>NTDB_id=53667 C270_RS02600 WP_014974002.1 495104..496246(+) (recA) [Leuconostoc carnosum JB16]
ATGGTAACGAAAAAAACGACTAAAAAAGAAGACAAAGAAAACCAAGCTAAGGGTCGCAAAGCAGCACTTGATGAGGCACT
GAAGAAAATCGAAAAAAACTTTGGGAAAGGGTCTGTGATGTTGTTGGGTGAAAACGCAACAACGCAAGTGGACACTTACC
CATCAGGATCAGTTAAATTAGATGTTGCACTTGGTGTTGGTGGTTATCCAAAGGGTCGTATTATTGAGATATATGGACCA
GAATCATCAGGTAAAACGACACTGGCATTGCATGCTGTCGCTGAAGTACAAAAAGCTGGTGGCACAGCAGCGTATATTGA
TGCTGAAAACGCTTTAGATGTTAAATATGCTGAAGCATTGGGCATTCATAAAGATGAATTATTGTTATCACAGCCAGATA
CTGGTGAACAAGGATTGGAAATTGCCGATGCTTTGGTACAATCTGGAGCAGTTGATATTATCGTTATTGATTCAGTTGCA
GCATTGGTGCCTAGGGCTGAAATTGAAGGCGAGATGGGTGATGCCCATGTCGGATTACAAGCTCGTTTAATGAGTCAAGC
GTTACGTAAATTAGCCGGTACATTAAATCGTACAGGAACGATTGCTATCTTTATTAACCAAATCCGTGAAAAGATTGGGG
TGATGTTTGGTAATCCTGAAACAACACCTGGTGGTCGTGCGCTAAAGTTTTATTCAACGATTCGTTTAGAAGTACGTCGA
TCAACACAAATTAAAGATGGTACAGATGTTACAGGAAACTTAACTAAGGTCAAAGTTGTTAAAAATAAGGTAGCACCACC
ATTTAAAGTTGCTGAAGTCGATATTATGTACGGAAAAGGAATTTCACAAACTGGGGAAATTCTTGATTTAGGTGCTGATA
CAGAAATTATCCGTAAAGCTGGGGCATTCTACTATTATGATGATGTCAAAATAGGGCAAGGACGTGAAAAGGCGAAGGAA
TTTTTGGATAGTCCTGAAAATGCCGAGATGCGTCAAGAAATTTATGCTAAAGTACGTGATATTTTTGGTATCGGTGATGG
TAGTACAACTGAAGTCGCACCAGAAACAGAAGAATCAGTGGATGAACCAGATACATTGGATTTGGGGAATAATGATGATT
TGACTGACGAACCAATTGTATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (22-282)

3D structure

• AlphaFold DB: K0D677

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Latilactobacillus sakei subsp. sakei 23K	74.695	86.316	0.645
recA	Streptococcus mitis NCTC 12261	65.278	94.737	0.618
recA	Streptococcus mitis SK321	65.278	94.737	0.618
recA	Streptococcus pneumoniae D39	64.011	95.789	0.613
recA	Streptococcus pneumoniae Rx1	64.011	95.789	0.613
recA	Streptococcus pneumoniae R6	64.011	95.789	0.613
recA	Streptococcus pneumoniae TIGR4	64.011	95.789	0.613
recA	Streptococcus mutans UA159	62.772	96.842	0.608
recA	Streptococcus pyogenes NZ131	63.636	95.526	0.608
recA	Bacillus subtilis subsp. subtilis str. 168	69.632	85.789	0.597
recA	Lactococcus lactis subsp. cremoris KW2	64.023	92.895	0.595
recA	Ralstonia pseudosolanacearum GMI1000	63.83	86.579	0.553
recA	Acinetobacter baumannii D1279779	57.91	93.158	0.539
recA	Acinetobacter baylyi ADP1	58.166	91.842	0.534
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	59.763	88.947	0.532
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	60.976	86.316	0.526
recA	Glaesserella parasuis strain SC1401	54.396	95.789	0.521
recA	Pseudomonas stutzeri DSM 10701	57.434	90.263	0.518
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.327	86.053	0.511
recA	Neisseria gonorrhoeae MS11	60.252	83.421	0.503
recA	Neisseria gonorrhoeae strain FA1090	60.252	83.421	0.503
recA	Neisseria gonorrhoeae MS11	60.252	83.421	0.503
recA	Vibrio cholerae O1 biovar El Tor strain E7946	58.642	85.263	0.5
recA	Vibrio cholerae strain A1552	58.642	85.263	0.5
recA	Helicobacter pylori strain NCTC11637	54.783	90.789	0.497
recA	Helicobacter pylori 26695	54.783	90.789	0.497