Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6J61_RS09750 Genome accession   NZ_CP069520
Coordinates   2135598..2136734 (-) Length   378 a.a.
NCBI ID   WP_002568106.1    Uniprot ID   A0A412ZEW3
Organism   Enterocloster bolteae strain FDAARGOS_1231     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2130598..2141734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J61_RS09730 (I6J61_09730) - 2131748..2132470 (-) 723 WP_002568102.1 DUF5131 family protein -
  I6J61_RS09735 (I6J61_09735) - 2132551..2133015 (-) 465 WP_002568103.1 VOC family protein -
  I6J61_RS09740 (I6J61_09740) rny 2133299..2134849 (-) 1551 WP_002568104.1 ribonuclease Y -
  I6J61_RS09745 (I6J61_09745) - 2134984..2135601 (-) 618 WP_002568105.1 regulatory protein RecX -
  I6J61_RS09750 (I6J61_09750) recA 2135598..2136734 (-) 1137 WP_002568106.1 recombinase RecA Machinery gene
  I6J61_RS09755 (I6J61_09755) - 2136851..2136988 (-) 138 WP_007036590.1 hypothetical protein -
  I6J61_RS09760 (I6J61_09760) - 2137208..2138257 (-) 1050 WP_002568107.1 acyltransferase family protein -
  I6J61_RS09765 (I6J61_09765) - 2138394..2139563 (-) 1170 WP_002568108.1 ribose-phosphate pyrophosphokinase -
  I6J61_RS09770 (I6J61_09770) - 2139684..2140664 (-) 981 WP_002568109.1 ATP-binding protein -

Sequence

Protein


Download         Length: 378 a.a.        Molecular weight: 40726.50 Da        Isoelectric Point: 5.2501

>NTDB_id=535304 I6J61_RS09750 WP_002568106.1 2135598..2136734(-) (recA) [Enterocloster bolteae strain FDAARGOS_1231]
MAREEKSNVINRDMNKDEKLKALDAALTQIEKAYGKGSVMKLGDSRANMNIETVPTGSISLDIALGLGGVPKGRIVEVYG
PESSGKTTVALHMVAEVQKRGGIAGFIDAEHALDPVYARNIGVDIDNLYISQPDNGEQALEITETMVRSGAVDIVIVDSV
AALVPKAEIDGEMGDSHVGLQARLMSQALRKLTAVISKSNCIVIFINQLREKVGVMFGNPETTTGGRALKFYASVRLDVR
RIETLKQGGEVTGNRVRVKVVKNKIAPPFKEAEFDIMFGRGISKEGDILDLAVKENIIEKSGAWFAYNGSKIGQGRENSK
QYLSDNPAVCAEVEAKVRAKYELPGAEEAMEAAEAFKTAAKQAETKTGETDADAPELV

Nucleotide


Download         Length: 1137 bp        

>NTDB_id=535304 I6J61_RS09750 WP_002568106.1 2135598..2136734(-) (recA) [Enterocloster bolteae strain FDAARGOS_1231]
ATGGCCAGAGAAGAGAAGAGTAATGTAATCAACCGCGATATGAATAAAGACGAGAAGTTAAAGGCATTAGACGCTGCCCT
GACCCAGATTGAGAAGGCATACGGAAAAGGATCCGTCATGAAGCTGGGGGATTCAAGAGCAAATATGAATATTGAGACAG
TGCCCACCGGCTCCATCAGCCTGGATATAGCCCTGGGATTGGGCGGAGTTCCCAAGGGCAGGATTGTAGAGGTATATGGA
CCTGAGTCTTCCGGTAAGACCACGGTCGCCCTGCACATGGTGGCAGAGGTGCAGAAGCGCGGGGGCATTGCAGGCTTCAT
TGACGCAGAGCATGCCCTGGATCCTGTATATGCCAGGAACATAGGAGTGGATATTGATAACCTGTATATCTCCCAGCCGG
ATAACGGCGAGCAGGCACTGGAGATTACCGAGACCATGGTGCGTTCCGGTGCCGTGGACATCGTGATTGTGGACTCCGTG
GCCGCTCTGGTTCCCAAGGCTGAGATTGACGGCGAGATGGGAGATTCCCATGTGGGTCTTCAGGCCAGGCTTATGTCACA
GGCTCTGAGGAAGCTGACCGCTGTTATCAGCAAGTCCAACTGTATTGTCATCTTCATCAACCAGCTGCGTGAGAAGGTGG
GTGTCATGTTTGGCAATCCGGAGACTACCACAGGCGGACGTGCTCTGAAGTTCTATGCATCCGTGCGCCTGGATGTCCGC
AGGATAGAGACCTTAAAGCAGGGCGGAGAGGTCACAGGAAACCGTGTCAGGGTAAAGGTAGTGAAGAATAAGATTGCGCC
TCCTTTTAAGGAAGCTGAATTCGATATCATGTTTGGCAGGGGTATTTCCAAGGAAGGCGATATCCTGGACCTGGCTGTTA
AGGAGAACATCATTGAGAAGAGCGGCGCCTGGTTTGCCTATAACGGTTCCAAGATTGGCCAGGGACGTGAGAATTCCAAG
CAGTACCTGTCTGATAACCCGGCTGTCTGCGCCGAGGTGGAGGCCAAGGTAAGGGCAAAGTATGAACTGCCCGGAGCAGA
GGAAGCCATGGAGGCAGCCGAGGCCTTTAAGACAGCCGCTAAACAGGCGGAAACTAAAACAGGGGAAACTGATGCGGATG
CCCCTGAACTGGTATGA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(21-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A412ZEW3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Neisseria gonorrhoeae MS11

60.833

95.238

0.579
  recA Neisseria gonorrhoeae MS11

60.833

95.238

0.579
  recA Neisseria gonorrhoeae strain FA1090

60.833

95.238

0.579
  recA Streptococcus mitis NCTC 12261

60.833

95.238

0.579
  recA Bacillus subtilis subsp. subtilis str. 168

68.012

85.185

0.579
  recA Lactococcus lactis subsp. cremoris KW2

62.571

92.593

0.579
  recA Streptococcus pyogenes NZ131

62.609

91.27

0.571
  recA Streptococcus mitis SK321

63.717

89.683

0.571
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

64.955

87.566

0.569
  recA Latilactobacillus sakei subsp. sakei 23K

65.549

86.772

0.569
  recA Streptococcus pneumoniae R6

62.722

89.418

0.561
  recA Streptococcus pneumoniae TIGR4

62.722

89.418

0.561
  recA Streptococcus pneumoniae D39

62.722

89.418

0.561
  recA Streptococcus pneumoniae Rx1

62.722

89.418

0.561
  recA Streptococcus mutans UA159

63.746

87.566

0.558
  recA Glaesserella parasuis strain SC1401

62.5

88.889

0.556
  recA Acinetobacter baylyi ADP1

65.217

85.185

0.556
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.333

87.302

0.553
  recA Pseudomonas stutzeri DSM 10701

64.198

85.714

0.55
  recA Acinetobacter baumannii D1279779

62.09

88.624

0.55
  recA Vibrio cholerae strain A1552

64.596

85.185

0.55
  recA Vibrio cholerae O1 biovar El Tor strain E7946

64.596

85.185

0.55
  recA Helicobacter pylori strain NCTC11637

62.539

85.45

0.534
  recA Helicobacter pylori 26695

62.539

85.45

0.534
  recA Ralstonia pseudosolanacearum GMI1000

64.401

81.746

0.526
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

58.61

87.566

0.513