Detailed information    

insolico Bioinformatically predicted

Overview


Name   recA   Type   Machinery gene
Locus tag   I6I53_RS11520 Genome accession   NZ_CP068176
Coordinates   2334290..2335336 (-) Length   348 a.a.
NCBI ID   WP_004998126.1    Uniprot ID   A0A0A8JC33
Organism   Acinetobacter ursingii strain FDAARGOS_1096     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2329290..2340336
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I53_RS11485 (I6I53_11490) - 2329462..2329962 (+) 501 WP_004998137.1 OmpH family outer membrane protein -
  I6I53_RS11490 (I6I53_11495) lpxD 2329966..2331036 (+) 1071 WP_004998136.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase -
  I6I53_RS11495 (I6I53_11500) fabZ 2331044..2331529 (+) 486 WP_119686670.1 3-hydroxyacyl-ACP dehydratase FabZ -
  I6I53_RS11500 (I6I53_11505) lpxA 2331526..2332314 (+) 789 WP_004998133.1 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase -
  I6I53_RS11505 (I6I53_11510) - 2332379..2333269 (-) 891 WP_004998132.1 YbgF trimerization domain-containing protein -
  I6I53_RS11515 (I6I53_11520) - 2333753..2334238 (-) 486 WP_004998127.1 regulatory protein RecX -
  I6I53_RS11520 (I6I53_11525) recA 2334290..2335336 (-) 1047 WP_004998126.1 recombinase RecA Machinery gene
  I6I53_RS11525 (I6I53_11530) - 2335496..2335936 (-) 441 WP_004987998.1 RNA-binding S4 domain-containing protein -
  I6I53_RS11530 (I6I53_11535) - 2335920..2336627 (-) 708 WP_004998123.1 HAD-IA family hydrolase -
  I6I53_RS11535 (I6I53_11540) - 2336641..2337501 (+) 861 WP_004998122.1 3'(2'),5'-bisphosphate nucleotidase CysQ -
  I6I53_RS11540 (I6I53_11545) - 2337561..2338304 (+) 744 WP_004998118.1 histidine phosphatase family protein -
  I6I53_RS11545 (I6I53_11550) - 2338299..2339291 (-) 993 WP_004998115.1 acyltransferase family protein -
  I6I53_RS11550 (I6I53_11555) rpsT 2339371..2339640 (-) 270 WP_004987979.1 30S ribosomal protein S20 -

Sequence


Protein


Download         Length: 348 a.a.        Molecular weight: 37730.05 Da        Isoelectric Point: 4.9278

>NTDB_id=527835 I6I53_RS11520 WP_004998126.1 2334290..2335336(-) (recA) [Acinetobacter ursingii strain FDAARGOS_1096]
MDDNKSKALNAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIVEIYGPESSGKTTMTLQAIA
QCQKAGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDHGEQALEIADMLVRSGAIDLIVVDSVAALTPRAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRVGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEALFQILYGKGTNQLGEVVDLAVQQEIVQKAGAWYSYQGNKIGQGKNNVIRYFEENPAIAQEIEK
QIRDQLLTSTPVANSTEVEEEEPDFLES

Nucleotide


Download         Length: 1047 bp        

>NTDB_id=527835 I6I53_RS11520 WP_004998126.1 2334290..2335336(-) (recA) [Acinetobacter ursingii strain FDAARGOS_1096]
ATGGATGATAATAAAAGCAAGGCATTAAACGCGGCCTTGAGCCAGATTGAAAAACAATTTGGTAAAAATACAGTGATGCG
CTTAGGTGACAACACGGTACAAGCAGTTGAAGCGGTGTCCACAGGCTCACTGACACTGGATATTGCACTCGGTATTGGTG
GTTTGCCAAAAGGCCGTATTGTTGAGATTTATGGTCCTGAATCATCAGGTAAAACCACAATGACCTTACAAGCCATTGCT
CAATGTCAAAAAGCGGGCGGTACGTGCGCGTTTATTGATGCTGAACATGCACTTGATCCACAATATGCACGTAAGCTTGG
CGTGGACATCGACAATCTATTGGTTTCACAGCCTGACCATGGTGAACAGGCACTTGAAATTGCGGACATGCTAGTGCGCT
CAGGGGCAATTGATCTGATTGTTGTCGACTCTGTTGCGGCACTGACTCCTCGCGCTGAAATTGAAGGCGAAATGGGCGAT
TCACACATGGGCTTACAAGCTCGTCTTATGAGTCAGGCATTGCGTAAAATCACGGGGAATGCCAAACGTTCGAACTGTAT
GGTGATTTTCATTAACCAGATTCGTATGAAGATTGGGGTCATGTTCGGTAGCCCAGAAACCACGACTGGTGGTAATGCAC
TTAAGTTCTATGCTTCTGTACGTTTGGATATTCGTCGTGTTGGACAGGTCAAAGAAGGTGACGAGATTGTTGGTTCTGAA
ACCAAAGTCAAAGTTGTCAAAAACAAAATGGCGCCTCCATTTAAAGAAGCACTTTTCCAAATCCTTTATGGCAAAGGCAC
CAATCAACTGGGTGAAGTCGTGGATTTAGCGGTGCAACAGGAAATCGTGCAAAAAGCAGGTGCATGGTATTCTTATCAAG
GCAACAAAATTGGTCAGGGTAAAAATAACGTGATTCGTTATTTTGAAGAAAATCCAGCGATTGCGCAGGAAATTGAAAAA
CAGATTCGCGATCAATTACTGACCAGTACACCAGTTGCAAATAGCACTGAAGTTGAAGAAGAAGAACCTGACTTTTTAGA
AAGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A8JC33

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

91.977

100

0.922

  recA Acinetobacter baumannii D1279779

92.219

99.713

0.92

  recA Pseudomonas stutzeri DSM 10701

74.128

98.851

0.733

  recA Vibrio cholerae strain A1552

73.394

93.966

0.69

  recA Vibrio cholerae O1 biovar El Tor strain E7946

73.394

93.966

0.69

  recA Glaesserella parasuis strain SC1401

70.336

93.966

0.661

  recA Ralstonia pseudosolanacearum GMI1000

69.605

94.54

0.658

  recA Neisseria gonorrhoeae MS11

68.21

93.103

0.635

  recA Neisseria gonorrhoeae MS11

68.21

93.103

0.635

  recA Neisseria gonorrhoeae strain FA1090

68.21

93.103

0.635

  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

62.391

98.563

0.615

  recA Streptococcus pneumoniae D39

60.694

99.425

0.603

  recA Streptococcus pneumoniae TIGR4

60.694

99.425

0.603

  recA Streptococcus pneumoniae R6

60.694

99.425

0.603

  recA Streptococcus pneumoniae Rx1

60.694

99.425

0.603

  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.142

95.115

0.601

  recA Streptococcus mitis NCTC 12261

60.116

99.425

0.598

  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.236

95.115

0.592

  recA Helicobacter pylori strain NCTC11637

62.691

93.966

0.589

  recA Helicobacter pylori 26695

62.385

93.966

0.586

  recA Streptococcus mutans UA159

61.774

93.966

0.58

  recA Streptococcus mitis SK321

61.963

93.678

0.58

  recA Streptococcus pyogenes NZ131

61.538

93.391

0.575

  recA Bacillus subtilis subsp. subtilis str. 168

61.491

92.529

0.569

  recA Lactococcus lactis subsp. cremoris KW2

57.91

96.264

0.557

  recA Latilactobacillus sakei subsp. sakei 23K

55.942

99.138

0.555