Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6I87_RS02150 Genome accession   NZ_CP068109
Coordinates   461818..462873 (-) Length   351 a.a.
NCBI ID   WP_201665602.1    Uniprot ID   -
Organism   Moraxella osloensis strain FDAARGOS_1130     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 456818..467873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6I87_RS02125 (I6I87_02125) acpP 457035..457277 (+) 243 WP_007115622.1 acyl carrier protein -
  I6I87_RS02130 (I6I87_02130) - 457373..458170 (-) 798 WP_201665595.1 inner membrane protein YpjD -
  I6I87_RS02135 (I6I87_02135) ffh 458336..459802 (+) 1467 WP_227715562.1 signal recognition particle protein -
  I6I87_RS02140 (I6I87_02140) - 459983..461071 (+) 1089 WP_201665597.1 sulfate ABC transporter substrate-binding protein -
  I6I87_RS02145 (I6I87_02145) - 461080..461712 (-) 633 WP_201665600.1 regulatory protein RecX -
  I6I87_RS02150 (I6I87_02150) recA 461818..462873 (-) 1056 WP_201665602.1 recombinase RecA Machinery gene
  I6I87_RS02155 (I6I87_02155) - 463342..464982 (-) 1641 Protein_413 acyl-CoA synthetase -
  I6I87_RS02160 (I6I87_02160) - 465131..465979 (-) 849 WP_227715563.1 DegV family protein -

Sequence

Protein


Download         Length: 351 a.a.        Molecular weight: 37713.17 Da        Isoelectric Point: 5.0391

>NTDB_id=527161 I6I87_RS02150 WP_201665602.1 461818..462873(-) (recA) [Moraxella osloensis strain FDAARGOS_1130]
MDDNKAKALTAALSQIEKQFGKNTIMRLGDESAKINVDVVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQAI
AQCQKQGGTCAFIDAEHALDPIYAKKLGVDVDALLVTQPDNGEQALEITDMLVRSGAVDMIVVDSVAALTPRAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVVFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKEGENIVGS
ETRVKVIKNKLAPPFRQAEFDIMYGTGTNHLGEVVDLGVDIDAVKKSGAWYSYNDSKIGQGKANAIRFLEENPQIAQEIE
AKVRAAKLGNVEPVPEEAHDVEPPEFVEGMQ

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=527161 I6I87_RS02150 WP_201665602.1 461818..462873(-) (recA) [Moraxella osloensis strain FDAARGOS_1130]
ATGGACGACAATAAAGCCAAAGCTTTAACTGCCGCTTTATCACAAATTGAAAAACAATTCGGTAAAAATACCATCATGCG
TCTGGGTGATGAGTCAGCAAAAATCAACGTGGATGTAGTCTCCACAGGCTCATTGGGTTTGGATATTGCACTCGGCATTG
GCGGTTTGCCAAAGGGCCGTATCGTCGAAATTTATGGTCCTGAAAGTTCGGGTAAAACCACTTTAACCTTGCAAGCAATC
GCCCAATGTCAAAAGCAAGGCGGCACCTGTGCTTTTATCGATGCTGAGCATGCACTAGACCCTATTTATGCCAAAAAATT
GGGCGTTGATGTCGACGCTTTACTTGTCACGCAGCCTGACAACGGTGAACAAGCGCTTGAAATCACCGATATGCTAGTGC
GCTCAGGTGCGGTGGATATGATTGTTGTTGACTCGGTCGCCGCCCTTACCCCACGCGCAGAGATTGAAGGCGAAATGGGC
GACAGCCACATGGGTCTGCAAGCACGTTTGATGAGCCAAGCTTTACGAAAAATTACCGGTAACGCCAAACGCTCTAACTG
TATGGTAGTATTCATTAACCAAATTCGTATGAAAATCGGTGTCATGTTTGGCTCGCCAGAAACCACGACGGGTGGTAACG
CCCTTAAATTTTATGCGTCGGTGCGCTTGGATATTCGTCGTATTGGTGCGGTCAAAGAGGGTGAAAACATCGTCGGTTCT
GAGACCCGCGTTAAAGTCATCAAAAATAAACTGGCGCCGCCGTTTCGCCAAGCAGAATTTGACATCATGTATGGGACAGG
TACCAATCATCTAGGTGAAGTGGTTGACTTGGGTGTCGATATTGATGCGGTCAAAAAATCGGGCGCTTGGTACAGCTACA
ACGACAGTAAAATTGGTCAAGGTAAAGCCAACGCCATTAGATTCTTGGAAGAAAATCCACAAATCGCCCAAGAGATTGAA
GCCAAAGTGCGCGCTGCTAAGCTTGGTAATGTCGAACCTGTGCCAGAAGAAGCGCATGACGTTGAACCCCCTGAGTTTGT
CGAAGGTATGCAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

78.286

99.715

0.781
  recA Acinetobacter baumannii D1279779

77.81

98.86

0.769
  recA Pseudomonas stutzeri DSM 10701

73.199

98.86

0.724
  recA Vibrio cholerae strain A1552

70.704

100

0.715
  recA Vibrio cholerae O1 biovar El Tor strain E7946

70.704

100

0.715
  recA Neisseria gonorrhoeae strain FA1090

71.385

92.593

0.661
  recA Neisseria gonorrhoeae MS11

71.385

92.593

0.661
  recA Neisseria gonorrhoeae MS11

71.385

92.593

0.661
  recA Glaesserella parasuis strain SC1401

71.429

91.738

0.655
  recA Ralstonia pseudosolanacearum GMI1000

72.816

88.034

0.641
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

66.462

92.593

0.615
  recA Helicobacter pylori strain NCTC11637

62.941

96.866

0.61
  recA Helicobacter pylori 26695

62.647

96.866

0.607
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.222

93.732

0.593
  recA Streptococcus pneumoniae D39

57.66

100

0.59
  recA Streptococcus pneumoniae R6

57.66

100

0.59
  recA Streptococcus pneumoniae TIGR4

57.66

100

0.59
  recA Streptococcus pneumoniae Rx1

57.66

100

0.59
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.195

93.447

0.581
  recA Bacillus subtilis subsp. subtilis str. 168

62.654

92.308

0.578
  recA Latilactobacillus sakei subsp. sakei 23K

60

95.442

0.573
  recA Streptococcus pyogenes NZ131

60.429

92.877

0.561
  recA Streptococcus mitis NCTC 12261

60.802

92.308

0.561
  recA Streptococcus mitis SK321

60.494

92.308

0.558
  recA Lactococcus lactis subsp. cremoris KW2

59.877

92.308

0.553
  recA Streptococcus mutans UA159

59.509

92.877

0.553