Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   K6972_RS01400 Genome accession   NZ_CP082203
Coordinates   243927..246260 (+) Length   777 a.a.
NCBI ID   WP_222812674.1    Uniprot ID   -
Organism   Streptococcus suis strain NJ3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 238927..251260
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6972_RS01380 (K6972_01380) treP 239738..241726 (-) 1989 WP_222812671.1 PTS system trehalose-specific EIIBC component -
  K6972_RS01385 (K6972_01385) treR 241959..242672 (+) 714 WP_044683691.1 trehalose operon repressor Regulator
  K6972_RS01390 (K6972_01390) - 242730..243041 (+) 312 WP_002935948.1 hypothetical protein -
  K6972_RS01395 (K6972_01395) - 243038..243586 (+) 549 WP_002935945.1 CvpA family protein -
  K6972_RS01400 (K6972_01400) mutS/mutS2 243927..246260 (+) 2334 WP_222812674.1 endonuclease MutS2 Machinery gene
  K6972_RS01405 (K6972_01405) - 246284..246937 (+) 654 WP_222759673.1 GNAT family N-acetyltransferase -
  K6972_RS01410 (K6972_01410) trxA 247309..247623 (+) 315 WP_012775426.1 thioredoxin -
  K6972_RS10720 - 247723..247773 (-) 51 WP_353735889.1 hypothetical protein -
  K6972_RS01415 (K6972_01415) - 247763..249292 (+) 1530 WP_222812676.1 AMP-binding protein -
  K6972_RS01420 (K6972_01420) msrB 249332..250270 (+) 939 WP_222812677.1 peptide-methionine (R)-S-oxide reductase MsrB -

Sequence

Protein


Download         Length: 777 a.a.        Molecular weight: 87612.27 Da        Isoelectric Point: 6.5651

>NTDB_id=527121 K6972_RS01400 WP_222812674.1 243927..246260(+) (mutS/mutS2) [Streptococcus suis strain NJ3]
MNNKIIETLEFHKVRQKIEPYLLTEQGFEELRQLEPMVEVHRIQQAFDELTDIAQIFVENPYFSLAATSDIGPAMRRLEL
DTDLNIAELLAVKKVLEVSKSLLDFYGNLENVSLSQLDKLFEKIELFPHLQGSLQSINDAGFVEDFASEKLARIRRKIRE
AEDQVRQVMQDILKNKGDMLSDSILASRNGRNVLPVKNTYRNKIAGVVHDISASGSTVYIEPRAVVTLNEEISHLRAEER
HELNRILQELSDMLRPHSSVIRNNAWLIGHIDFVRAKHLFARDHQAVVPKLSEKQDIALLNVRHPLIAEPVPNDLYFGSQ
LTAIVITGPNTGGKTIMLKTLGLTHLMAQSGLPILADKGSRVAIFKEIFADIGDEQSIEQSLSTFSSHMTHTVQILAEAD
QDSLILFDELGAGTDPQEGASLAMAILDDLRLRGIKTMATTHYPELKAYGIETSGIENASMEFDSNSLRPTYKFMQGVPG
RSNAFEIARRLGLSDIIIQSAKSWTDTDSDVNRIIEKLESQTVESRQRLDKIRDVEQENYKMNRALRKLYDELNRERENE
LNKARLEAKEIVDMALAESEDILKNLHAAASLKPHQIIEAKAELKKLAPEVVDLSKNKVLKKAKIQREAKVGDDIIVTAY
GQRGTLTNQLKDGRWEAQVGLIKMTLTKDEFELVKAEKAEQPKKRQVHTVKRANVRGPKARLDLRGKRYEEAMMELDEFI
DQALLNNLAQVDIVHGIGTGVIREGVTKYLRRNKQVKEFGYAPQNAGGSGCTIVTFK

Nucleotide


Download         Length: 2334 bp        

>NTDB_id=527121 K6972_RS01400 WP_222812674.1 243927..246260(+) (mutS/mutS2) [Streptococcus suis strain NJ3]
ATGAATAATAAAATTATTGAAACCCTTGAATTTCACAAGGTAAGACAAAAAATTGAGCCCTATCTCTTGACGGAACAGGG
CTTTGAAGAATTACGACAGTTAGAGCCCATGGTGGAAGTCCACCGTATCCAACAGGCCTTCGACGAGTTGACAGACATAG
CTCAGATTTTTGTGGAAAATCCTTATTTCAGTCTGGCTGCTACTAGTGACATTGGTCCAGCCATGCGTCGTTTGGAATTG
GATACAGACCTCAATATCGCTGAGCTATTAGCTGTTAAAAAGGTCTTGGAAGTTTCTAAATCTCTCTTGGATTTTTATGG
AAATCTGGAAAATGTCAGTCTTAGCCAGCTGGATAAACTCTTTGAGAAGATTGAGCTTTTTCCACATTTACAAGGCTCCC
TCCAGTCCATCAATGATGCTGGTTTTGTAGAGGATTTTGCTTCTGAAAAGCTGGCTCGTATCCGCCGGAAAATCCGTGAA
GCTGAAGACCAAGTTCGTCAGGTCATGCAGGATATCTTGAAGAACAAGGGGGATATGCTGTCCGACAGCATCTTGGCTAG
TCGTAATGGGCGCAATGTCCTTCCTGTCAAAAATACCTATCGCAATAAGATTGCGGGTGTAGTCCATGATATCTCCGCCT
CAGGTTCGACCGTTTATATTGAGCCGCGGGCAGTGGTGACCTTGAACGAAGAAATCAGTCACCTACGTGCAGAAGAACGC
CATGAGCTCAACCGTATCTTGCAGGAATTGTCGGATATGCTCCGTCCGCATAGTAGCGTGATTCGTAACAATGCCTGGCT
TATCGGGCATATTGATTTCGTCCGTGCCAAGCATCTCTTTGCGCGTGATCATCAAGCAGTTGTACCCAAACTATCTGAGA
AGCAGGATATTGCCCTTCTCAACGTTCGACATCCGCTCATTGCTGAGCCTGTACCAAATGACCTGTATTTCGGTAGTCAA
TTGACGGCTATCGTGATAACAGGTCCCAACACGGGTGGTAAGACCATCATGCTTAAGACCTTGGGATTAACGCACCTTAT
GGCTCAGTCTGGTTTACCTATTTTGGCTGATAAGGGCAGTCGGGTAGCTATCTTCAAAGAAATTTTTGCGGATATTGGGG
ATGAACAGTCGATTGAGCAGAGTTTATCAACCTTCTCCAGTCACATGACTCACACGGTACAGATTTTAGCGGAGGCGGAT
CAAGATTCCCTCATTCTCTTTGACGAGTTGGGAGCGGGGACAGATCCGCAGGAGGGTGCGTCTTTGGCAATGGCTATTTT
GGATGACCTTCGTCTGCGGGGGATCAAGACCATGGCAACCACCCACTACCCTGAGCTCAAGGCTTATGGGATAGAAACCT
CTGGTATTGAAAATGCCAGCATGGAGTTTGATAGCAATAGCCTGCGTCCGACCTATAAGTTTATGCAGGGTGTTCCTGGT
CGCTCCAATGCCTTTGAAATTGCCCGCCGTCTTGGTCTATCTGATATTATTATCCAGTCAGCAAAATCTTGGACGGATAC
AGATAGCGATGTGAACCGCATTATCGAGAAATTGGAAAGTCAGACGGTTGAAAGTCGTCAGCGTCTGGATAAGATTCGTG
ATGTGGAGCAAGAAAATTACAAGATGAACCGAGCCCTTCGTAAGCTCTATGACGAGCTCAATCGTGAGCGGGAAAATGAG
CTCAACAAGGCACGCTTGGAAGCCAAGGAAATTGTAGATATGGCATTGGCAGAAAGCGAGGACATTCTTAAAAATCTTCA
TGCTGCAGCCAGTCTTAAGCCCCACCAGATTATCGAAGCCAAGGCAGAGCTGAAAAAGTTGGCGCCTGAAGTGGTAGATC
TGTCTAAAAACAAGGTTCTGAAGAAAGCTAAAATTCAGAGGGAAGCCAAGGTGGGTGATGACATTATCGTTACAGCTTAT
GGACAACGTGGGACCTTGACCAATCAGCTTAAAGATGGACGGTGGGAAGCTCAGGTTGGCTTGATTAAGATGACCTTGAC
CAAAGATGAGTTTGAGTTAGTCAAGGCGGAAAAGGCAGAGCAGCCTAAGAAACGCCAGGTTCACACAGTCAAACGTGCCA
ATGTACGAGGGCCAAAAGCCCGCTTAGATCTCCGTGGCAAACGCTACGAAGAGGCAATGATGGAGTTGGATGAATTTATC
GACCAAGCCCTTCTCAACAATCTGGCACAAGTCGACATTGTCCACGGTATTGGTACAGGGGTTATCCGAGAAGGGGTGAC
AAAGTACCTTCGCCGAAACAAGCAAGTCAAGGAGTTCGGCTACGCCCCACAAAATGCAGGGGGCTCAGGCTGTACTATTG
TGACGTTTAAATAG

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(631-670)

Smr domain (Smr)

(702-777)

MutS domain V (MutS_V)

(324-504)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.773

100

0.405