Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | JDY60_RS09320 | Genome accession | NZ_CP066172 |
| Coordinates | 1941318..1942469 (+) | Length | 383 a.a. |
| NCBI ID | WP_001085517.1 | Uniprot ID | A0A3R9NLQ2 |
| Organism | Streptococcus oralis strain SF100 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1941318..1968927 | 1941318..1942469 | within | 0 |
Gene organization within MGE regions
Location: 1941318..1968927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JDY60_RS09320 (JDY60_09320) | recA | 1941318..1942469 (+) | 1152 | WP_001085517.1 | recombinase RecA | Machinery gene |
| JDY60_RS09325 (JDY60_09325) | - | 1942639..1942833 (+) | 195 | WP_000415528.1 | PspC domain-containing protein | - |
| JDY60_RS09330 (JDY60_09330) | - | 1942963..1943517 (-) | 555 | WP_000060286.1 | GNAT family N-acetyltransferase | - |
| JDY60_RS09335 (JDY60_09335) | - | 1943627..1944997 (+) | 1371 | WP_200370823.1 | MATE family efflux transporter | - |
| JDY60_RS09340 (JDY60_09340) | - | 1945094..1945810 (+) | 717 | WP_000532894.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| JDY60_RS09345 (JDY60_09345) | - | 1945898..1947019 (-) | 1122 | WP_233848250.1 | site-specific integrase | - |
| JDY60_RS09670 (JDY60_09350) | - | 1947389..1947586 (-) | 198 | Protein_1807 | restriction endonuclease | - |
| JDY60_RS09355 (JDY60_09355) | - | 1947599..1947979 (-) | 381 | WP_015971699.1 | ImmA/IrrE family metallo-endopeptidase | - |
| JDY60_RS09360 (JDY60_09360) | - | 1947983..1948336 (-) | 354 | WP_015971700.1 | helix-turn-helix domain-containing protein | - |
| JDY60_RS09655 | - | 1948624..1948752 (+) | 129 | WP_015971701.1 | hypothetical protein | - |
| JDY60_RS09365 (JDY60_09365) | - | 1948767..1948979 (+) | 213 | WP_015971702.1 | hypothetical protein | - |
| JDY60_RS09370 (JDY60_09370) | - | 1948955..1949635 (-) | 681 | WP_015971703.1 | DUF4145 domain-containing protein | - |
| JDY60_RS09375 (JDY60_09375) | - | 1949690..1949899 (+) | 210 | WP_015971704.1 | helix-turn-helix transcriptional regulator | - |
| JDY60_RS09380 (JDY60_09380) | - | 1949903..1950100 (+) | 198 | WP_015971705.1 | hypothetical protein | - |
| JDY60_RS09385 (JDY60_09385) | - | 1950217..1950876 (-) | 660 | WP_015971707.1 | hypothetical protein | - |
| JDY60_RS09390 (JDY60_09390) | - | 1950933..1951163 (+) | 231 | WP_015971708.1 | hypothetical protein | - |
| JDY60_RS09395 (JDY60_09395) | - | 1951276..1951959 (-) | 684 | WP_233848252.1 | DUF4145 domain-containing protein | - |
| JDY60_RS09400 (JDY60_09400) | - | 1952008..1952727 (+) | 720 | WP_015971710.1 | ORF6C domain-containing protein | - |
| JDY60_RS09405 (JDY60_09405) | - | 1952810..1953082 (+) | 273 | WP_015971711.1 | hypothetical protein | - |
| JDY60_RS09410 (JDY60_09410) | - | 1953132..1953389 (+) | 258 | WP_015971712.1 | hypothetical protein | - |
| JDY60_RS09415 (JDY60_09415) | - | 1953405..1953833 (+) | 429 | WP_015971713.1 | hypothetical protein | - |
| JDY60_RS09420 (JDY60_09420) | - | 1953853..1954650 (+) | 798 | WP_015971714.1 | phage replisome organizer N-terminal domain-containing protein | - |
| JDY60_RS09425 (JDY60_09425) | - | 1954638..1954796 (+) | 159 | WP_015971715.1 | hypothetical protein | - |
| JDY60_RS09430 (JDY60_09430) | - | 1954790..1955560 (+) | 771 | WP_015971716.1 | ATP-binding protein | - |
| JDY60_RS09640 | - | 1955575..1955805 (+) | 231 | Protein_1825 | hypothetical protein | - |
| JDY60_RS09435 (JDY60_09435) | - | 1955907..1956380 (+) | 474 | WP_015971717.1 | Cas9 inhibitor AcrIIA9 family protein | - |
| JDY60_RS09440 (JDY60_09440) | - | 1956380..1957738 (+) | 1359 | WP_200370824.1 | PcfJ domain-containing protein | - |
| JDY60_RS09445 (JDY60_09445) | - | 1957758..1958084 (+) | 327 | WP_015971719.1 | hypothetical protein | - |
| JDY60_RS09450 (JDY60_09450) | - | 1958118..1958378 (+) | 261 | WP_015971720.1 | hypothetical protein | - |
| JDY60_RS09455 (JDY60_09455) | - | 1958375..1958716 (+) | 342 | WP_015971721.1 | HNH endonuclease | - |
| JDY60_RS09460 (JDY60_09460) | - | 1958713..1958973 (+) | 261 | WP_015971722.1 | DUF1372 family protein | - |
| JDY60_RS09465 (JDY60_09465) | - | 1958970..1959449 (+) | 480 | WP_233848254.1 | hypothetical protein | - |
| JDY60_RS09470 (JDY60_09470) | - | 1959470..1959721 (+) | 252 | WP_015971724.1 | DUF3310 domain-containing protein | - |
| JDY60_RS09475 (JDY60_09475) | - | 1959699..1959863 (+) | 165 | WP_015971725.1 | hypothetical protein | - |
| JDY60_RS09480 (JDY60_09480) | - | 1959883..1960308 (+) | 426 | WP_015971726.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| JDY60_RS09485 (JDY60_09485) | - | 1960421..1960987 (+) | 567 | WP_015971727.1 | site-specific integrase | - |
| JDY60_RS09490 (JDY60_09490) | - | 1961199..1961543 (+) | 345 | WP_015971728.1 | HNH endonuclease signature motif containing protein | - |
| JDY60_RS09495 (JDY60_09495) | - | 1961748..1963016 (+) | 1269 | WP_200370828.1 | phage portal protein | - |
| JDY60_RS09500 (JDY60_09500) | - | 1963006..1964211 (+) | 1206 | WP_200370831.1 | hypothetical protein | - |
| JDY60_RS09505 (JDY60_09505) | - | 1964201..1964380 (+) | 180 | WP_015971731.1 | CPCC family cysteine-rich protein | - |
| JDY60_RS09510 (JDY60_09510) | - | 1964543..1964794 (+) | 252 | WP_015971732.1 | DUF6275 family protein | - |
| JDY60_RS09515 (JDY60_09515) | - | 1964858..1966270 (+) | 1413 | WP_200370832.1 | terminase | - |
| JDY60_RS09520 (JDY60_09520) | - | 1966351..1966818 (+) | 468 | WP_200370833.1 | DUF4355 domain-containing protein | - |
| JDY60_RS09525 (JDY60_09525) | - | 1966831..1967733 (+) | 903 | WP_015971735.1 | phage major capsid protein | - |
| JDY60_RS09530 (JDY60_09530) | - | 1967736..1967957 (+) | 222 | WP_015971736.1 | HeH/LEM domain-containing protein | - |
| JDY60_RS09535 (JDY60_09535) | - | 1967978..1968373 (+) | 396 | WP_015971737.1 | phage Gp19/Gp15/Gp42 family protein | - |
| JDY60_RS09540 (JDY60_09540) | - | 1968360..1968698 (+) | 339 | WP_015971738.1 | hypothetical protein | - |
| JDY60_RS09545 (JDY60_09545) | - | 1968691..1968927 (+) | 237 | WP_015971739.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 383 a.a. Molecular weight: 40964.64 Da Isoelectric Point: 4.8797
>NTDB_id=518098 JDY60_RS09320 WP_001085517.1 1941318..1942469(+) (recA) [Streptococcus oralis strain SF100]
MAKKPTKKLDEIGKKFGADREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVR
GSTQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIQKAGAWYSYKGEKIGQGS
ENAKKYLADHPEIFDAIDHQVRVQYGLIEDEEGTTPTSVAEDLAPNQEVTLDLGDGLEIEIED
MAKKPTKKLDEIGKKFGADREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVR
GSTQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIQKAGAWYSYKGEKIGQGS
ENAKKYLADHPEIFDAIDHQVRVQYGLIEDEEGTTPTSVAEDLAPNQEVTLDLGDGLEIEIED
Nucleotide
Download Length: 1152 bp
>NTDB_id=518098 JDY60_RS09320 WP_001085517.1 1941318..1942469(+) (recA) [Streptococcus oralis strain SF100]
ATGGCGAAAAAACCAACAAAAAAATTAGATGAAATTGGGAAAAAATTTGGAGCTGACCGTGAAAAAGCATTGAACGATGC
TCTTAAATTGATCGAAAAAGACTTTGGTAAAGGCTCGATCATGCGCTTGGGTGAGCGCGCGGAGCAAAAAGTTCAAGTGA
TGAGCTCAGGCTCATTGGCTCTGGATATTGCTCTTGGTTCAGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGA
CCAGAATCATCTGGTAAGACAACGGTTGCCCTTCACGCTGTTGCGCAAGCACAAAAAGAAGGCGGTATCGCTGCCTTTAT
CGATGCGGAACATGCTCTTGACCCAGCCTATGCCGCAGCCCTCGGTGTGAACATTGACGAATTGCTCTTGTCACAACCAG
ACTCAGGAGAGCAAGGTCTTGAAATTGCTGGAAAATTGATTGACTCAGGTGCAGTTGACCTTGTCGTTATCGACTCGGTT
GCGGCCCTTGTACCTCGTGCGGAAATTGATGGGGATATTGGAGACAGTCACGTTGGTTTGCAGGCTCGAATGATGAGCCA
GGCTATGCGTAAACTCGGTGCTTCTATCAATAAAACCAAGACAATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTTG
GGGTCATGTTTGGAAATCCAGAAACAACACCTGGTGGACGTGCTTTGAAATTCTACGCTTCAGTCCGTTTGGATGTTCGT
GGAAGCACACAAATCAAGGGAACTGGTGACCAAAAAGATACCAATGTCGGTAAGGAAACCAAGATCAAGGTCGTGAAAAA
CAAGGTGGCTCCACCATTTAAGGAAGCCTTTGTTGAAATCATGTACGGAGAAGGAATCTCTAAGACTGGTGAGCTCTTGA
AGATTGCAAGTGATCTCGATATCATCCAAAAAGCGGGAGCATGGTACTCTTATAAGGGTGAAAAAATCGGACAAGGATCT
GAAAATGCTAAGAAATACTTGGCGGATCACCCAGAAATCTTTGATGCCATTGACCATCAAGTCCGTGTTCAATATGGCTT
GATTGAAGATGAAGAAGGGACAACTCCTACCTCTGTCGCTGAAGATCTAGCACCTAACCAAGAAGTAACGCTTGACCTAG
GCGACGGACTTGAAATCGAAATTGAAGATTAA
ATGGCGAAAAAACCAACAAAAAAATTAGATGAAATTGGGAAAAAATTTGGAGCTGACCGTGAAAAAGCATTGAACGATGC
TCTTAAATTGATCGAAAAAGACTTTGGTAAAGGCTCGATCATGCGCTTGGGTGAGCGCGCGGAGCAAAAAGTTCAAGTGA
TGAGCTCAGGCTCATTGGCTCTGGATATTGCTCTTGGTTCAGGTGGTTATCCTAAAGGACGTATCATCGAAATCTATGGA
CCAGAATCATCTGGTAAGACAACGGTTGCCCTTCACGCTGTTGCGCAAGCACAAAAAGAAGGCGGTATCGCTGCCTTTAT
CGATGCGGAACATGCTCTTGACCCAGCCTATGCCGCAGCCCTCGGTGTGAACATTGACGAATTGCTCTTGTCACAACCAG
ACTCAGGAGAGCAAGGTCTTGAAATTGCTGGAAAATTGATTGACTCAGGTGCAGTTGACCTTGTCGTTATCGACTCGGTT
GCGGCCCTTGTACCTCGTGCGGAAATTGATGGGGATATTGGAGACAGTCACGTTGGTTTGCAGGCTCGAATGATGAGCCA
GGCTATGCGTAAACTCGGTGCTTCTATCAATAAAACCAAGACAATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTTG
GGGTCATGTTTGGAAATCCAGAAACAACACCTGGTGGACGTGCTTTGAAATTCTACGCTTCAGTCCGTTTGGATGTTCGT
GGAAGCACACAAATCAAGGGAACTGGTGACCAAAAAGATACCAATGTCGGTAAGGAAACCAAGATCAAGGTCGTGAAAAA
CAAGGTGGCTCCACCATTTAAGGAAGCCTTTGTTGAAATCATGTACGGAGAAGGAATCTCTAAGACTGGTGAGCTCTTGA
AGATTGCAAGTGATCTCGATATCATCCAAAAAGCGGGAGCATGGTACTCTTATAAGGGTGAAAAAATCGGACAAGGATCT
GAAAATGCTAAGAAATACTTGGCGGATCACCCAGAAATCTTTGATGCCATTGACCATCAAGTCCGTGTTCAATATGGCTT
GATTGAAGATGAAGAAGGGACAACTCCTACCTCTGTCGCTGAAGATCTAGCACCTAACCAAGAAGTAACGCTTGACCTAG
GCGACGGACTTGAAATCGAAATTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.