Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | I6H86_RS18145 | Genome accession | NZ_CP066089 |
| Coordinates | 3867027..3868091 (+) | Length | 354 a.a. |
| NCBI ID | WP_012134806.1 | Uniprot ID | A8ANQ3 |
| Organism | Citrobacter koseri strain FDAARGOS_1029 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3857268..3899607 | 3867027..3868091 | within | 0 |
Gene organization within MGE regions
Location: 3857268..3899607
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6H86_RS18085 (I6H86_18085) | gutQ | 3857268..3858233 (-) | 966 | WP_012134818.1 | arabinose-5-phosphate isomerase GutQ | - |
| I6H86_RS18090 (I6H86_18090) | srlR | 3858226..3858999 (-) | 774 | WP_012134817.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| I6H86_RS18095 (I6H86_18095) | gutM | 3859073..3859432 (-) | 360 | WP_012134816.1 | transcriptional regulator GutM | - |
| I6H86_RS18100 (I6H86_18100) | srlD | 3859534..3860313 (-) | 780 | WP_012134815.1 | sorbitol-6-phosphate dehydrogenase | - |
| I6H86_RS18105 (I6H86_18105) | srlB | 3860332..3860694 (-) | 363 | WP_012134814.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| I6H86_RS18110 (I6H86_18110) | - | 3860706..3861677 (-) | 972 | WP_012134813.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| I6H86_RS18115 (I6H86_18115) | srlA | 3861674..3862237 (-) | 564 | WP_012134812.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
| I6H86_RS18120 (I6H86_18120) | mltB | 3862493..3863593 (+) | 1101 | WP_012134811.1 | lytic murein transglycosylase B | - |
| I6H86_RS18125 (I6H86_18125) | - | 3863899..3864552 (+) | 654 | WP_012134810.1 | metal ABC transporter ATP-binding protein | - |
| I6H86_RS18130 (I6H86_18130) | - | 3864549..3865409 (+) | 861 | WP_012134809.1 | metal ABC transporter permease | - |
| I6H86_RS18135 (I6H86_18135) | - | 3865424..3866302 (+) | 879 | WP_024130887.1 | metal ABC transporter substrate-binding protein | - |
| I6H86_RS18140 (I6H86_18140) | pncC | 3866433..3866930 (+) | 498 | WP_024130886.1 | nicotinamide-nucleotide amidase | - |
| I6H86_RS18145 (I6H86_18145) | recA | 3867027..3868091 (+) | 1065 | WP_012134806.1 | recombinase RecA | Machinery gene |
| I6H86_RS18150 (I6H86_18150) | recX | 3868198..3868698 (+) | 501 | WP_024130885.1 | recombination regulator RecX | - |
| I6H86_RS18155 (I6H86_18155) | alaS | 3868830..3871457 (+) | 2628 | WP_012134804.1 | alanine--tRNA ligase | - |
| I6H86_RS18160 (I6H86_18160) | csrA | 3871697..3871882 (+) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| I6H86_RS18190 (I6H86_18190) | yqaB | 3873346..3873912 (+) | 567 | WP_012134803.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| I6H86_RS18195 (I6H86_18195) | - | 3873909..3874337 (+) | 429 | WP_012134802.1 | YqaA family protein | - |
| I6H86_RS18200 (I6H86_18200) | gshA | 3874411..3875967 (+) | 1557 | WP_012134801.1 | glutamate--cysteine ligase | - |
| I6H86_RS18205 (I6H86_18205) | luxS | 3876117..3876632 (+) | 516 | WP_012134800.1 | S-ribosylhomocysteine lyase | - |
| I6H86_RS18210 (I6H86_18210) | emrB | 3876757..3878295 (-) | 1539 | WP_012134799.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| I6H86_RS18215 (I6H86_18215) | emrA | 3878312..3879484 (-) | 1173 | WP_024130884.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| I6H86_RS18220 (I6H86_18220) | mprA | 3879613..3880143 (-) | 531 | WP_012134797.1 | transcriptional repressor MprA | - |
| I6H86_RS18225 (I6H86_18225) | ygaH | 3880234..3880569 (-) | 336 | WP_012134796.1 | L-valine transporter subunit YgaH | - |
| I6H86_RS18230 (I6H86_18230) | - | 3880559..3881296 (-) | 738 | WP_012134795.1 | AzlC family ABC transporter permease | - |
| I6H86_RS18235 (I6H86_18235) | - | 3881421..3882605 (-) | 1185 | WP_012134794.1 | MFS transporter | - |
| I6H86_RS18240 (I6H86_18240) | proX | 3882797..3883792 (-) | 996 | WP_012134793.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| I6H86_RS18245 (I6H86_18245) | proW | 3883982..3885046 (-) | 1065 | WP_012134792.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| I6H86_RS18250 (I6H86_18250) | proV | 3885039..3886241 (-) | 1203 | WP_012134791.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| I6H86_RS18255 (I6H86_18255) | nrdF | 3886596..3887555 (-) | 960 | WP_012134789.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| I6H86_RS18260 (I6H86_18260) | nrdE | 3887566..3889710 (-) | 2145 | WP_024130883.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| I6H86_RS18265 (I6H86_18265) | nrdI | 3889683..3890093 (-) | 411 | WP_012134787.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| I6H86_RS18270 (I6H86_18270) | nrdH | 3890090..3890335 (-) | 246 | WP_024130882.1 | glutaredoxin-like protein NrdH | - |
| I6H86_RS18275 (I6H86_18275) | - | 3890598..3891029 (-) | 432 | WP_024130881.1 | carboxymuconolactone decarboxylase family protein | - |
| I6H86_RS18280 (I6H86_18280) | - | 3891133..3892485 (+) | 1353 | WP_012134784.1 | PLP-dependent aminotransferase family protein | - |
| I6H86_RS18285 (I6H86_18285) | - | 3892519..3892845 (-) | 327 | WP_024130880.1 | DUF883 domain-containing protein | - |
| I6H86_RS18290 (I6H86_18290) | - | 3893008..3893364 (+) | 357 | WP_012134782.1 | DUF2002 family protein | - |
| I6H86_RS18295 (I6H86_18295) | alaE | 3893404..3893853 (-) | 450 | WP_024130879.1 | L-alanine exporter AlaE | - |
| I6H86_RS18300 (I6H86_18300) | stpA | 3894362..3894763 (+) | 402 | WP_012134778.1 | DNA-binding protein StpA | - |
| I6H86_RS18305 (I6H86_18305) | - | 3894871..3895398 (-) | 528 | WP_012134777.1 | rhodanese family protein | - |
| I6H86_RS18310 (I6H86_18310) | lysM | 3895589..3896038 (+) | 450 | WP_012134776.1 | peptidoglycan-binding protein LysM | - |
| I6H86_RS18315 (I6H86_18315) | csiR | 3896045..3896737 (-) | 693 | WP_012134775.1 | DNA-binding transcriptional regulator CsiR | - |
| I6H86_RS18320 (I6H86_18320) | gabP | 3896794..3898194 (-) | 1401 | WP_024130878.1 | GABA permease | - |
| I6H86_RS18325 (I6H86_18325) | gabT | 3898324..3899607 (-) | 1284 | WP_012134773.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 354 a.a. Molecular weight: 38088.47 Da Isoelectric Point: 4.8171
>NTDB_id=517293 I6H86_RS18145 WP_012134806.1 3867027..3868091(+) (recA) [Citrobacter koseri strain FDAARGOS_1029]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKANATAWLKENPATAKEI
EKKVRELLLSNQDSTPDFSVDDNGEGVKETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
IAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGENVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIGQGKANATAWLKENPATAKEI
EKKVRELLLSNQDSTPDFSVDDNGEGVKETNEDF
Nucleotide
Download Length: 1065 bp
>NTDB_id=517293 I6H86_RS18145 WP_012134806.1 3867027..3868091(+) (recA) [Citrobacter koseri strain FDAARGOS_1029]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCGCTGGGCCAGATCGAAAAACAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCTATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCTCTGGATATCGCGCTGGGCG
CGGGTGGCCTGCCGATGGGGCGTATCGTAGAAATCTACGGGCCGGAATCCTCCGGTAAAACCACCCTGACGCTTCAGGTG
ATTGCCGCTGCACAGCGTGAAGGCAAAACCTGTGCGTTTATCGACGCCGAACATGCGCTGGACCCTATCTATGCCCGCAA
ACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGG
CGCGTTCAGGCGCTGTAGACGTTATCGTTGTTGACTCCGTGGCGGCGTTGACGCCGAAAGCGGAAATCGAAGGTGAAATC
GGCGACTCTCATATGGGCCTCGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCCGGTAACCTGAAACAGTCCAA
CACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGCGTCATGTTCGGCAACCCGGAAACCACTACCGGGGGTA
ACGCGCTGAAATTCTACGCGTCCGTTCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTCGTGGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCCGCGCCGTTTAAACAGGCAGAGTTCCAGATCCTCTATGGCGA
AGGCATTAACTTCTATGGCGAACTGGTTGACCTGGGCGTGAAAGAGAAGCTGATCGAGAAAGCCGGTGCATGGTACAGCT
ATAACGGCGAGAAAATCGGTCAGGGTAAAGCGAATGCCACTGCCTGGCTGAAAGAGAACCCGGCGACCGCCAAAGAGATC
GAGAAAAAAGTGCGTGAGCTGCTGCTGAGCAACCAGGACTCGACGCCAGACTTCTCCGTTGATGACAACGGTGAAGGTGT
GAAAGAAACCAACGAAGATTTCTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCGCTGGGCCAGATCGAAAAACAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCTATGGATGTGGAAACCATCTCTACCGGTTCGCTTTCTCTGGATATCGCGCTGGGCG
CGGGTGGCCTGCCGATGGGGCGTATCGTAGAAATCTACGGGCCGGAATCCTCCGGTAAAACCACCCTGACGCTTCAGGTG
ATTGCCGCTGCACAGCGTGAAGGCAAAACCTGTGCGTTTATCGACGCCGAACATGCGCTGGACCCTATCTATGCCCGCAA
ACTGGGCGTCGATATCGACAACCTGCTGTGCTCCCAGCCGGACACCGGCGAGCAGGCGCTGGAAATCTGTGATGCGCTGG
CGCGTTCAGGCGCTGTAGACGTTATCGTTGTTGACTCCGTGGCGGCGTTGACGCCGAAAGCGGAAATCGAAGGTGAAATC
GGCGACTCTCATATGGGCCTCGCGGCGCGTATGATGAGCCAGGCGATGCGTAAGCTGGCCGGTAACCTGAAACAGTCCAA
CACCCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGCGTCATGTTCGGCAACCCGGAAACCACTACCGGGGGTA
ACGCGCTGAAATTCTACGCGTCCGTTCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGCGAAAACGTCGTGGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCCGCGCCGTTTAAACAGGCAGAGTTCCAGATCCTCTATGGCGA
AGGCATTAACTTCTATGGCGAACTGGTTGACCTGGGCGTGAAAGAGAAGCTGATCGAGAAAGCCGGTGCATGGTACAGCT
ATAACGGCGAGAAAATCGGTCAGGGTAAAGCGAATGCCACTGCCTGGCTGAAAGAGAACCCGGCGACCGCCAAAGAGATC
GAGAAAAAAGTGCGTGAGCTGCTGCTGAGCAACCAGGACTCGACGCCAGACTTCTCCGTTGATGACAACGGTGAAGGTGT
GAAAGAAACCAACGAAGATTTCTAA
Similar proteins
Only experimentally validated proteins are listed.