Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6G27_RS03615 Genome accession   NZ_CP065751
Coordinates   804944..805999 (-) Length   351 a.a.
NCBI ID   WP_062332196.1    Uniprot ID   A0A378QBR6
Organism   Moraxella osloensis strain FDAARGOS_870     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 799944..810999
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G27_RS03590 (I6G27_03590) acpP 800170..800412 (+) 243 WP_007115622.1 acyl carrier protein -
  I6G27_RS03595 (I6G27_03595) - 800496..801293 (-) 798 WP_172460484.1 inner membrane protein YpjD -
  I6G27_RS03600 (I6G27_03600) ffh 801459..802925 (+) 1467 WP_062332199.1 signal recognition particle protein -
  I6G27_RS03605 (I6G27_03605) - 803105..804193 (+) 1089 WP_082741417.1 sulfate ABC transporter substrate-binding protein -
  I6G27_RS03610 (I6G27_03610) - 804202..804870 (-) 669 WP_227713377.1 regulatory protein RecX -
  I6G27_RS03615 (I6G27_03615) recA 804944..805999 (-) 1056 WP_062332196.1 recombinase RecA Machinery gene
  I6G27_RS03620 (I6G27_03620) - 806438..808078 (-) 1641 Protein_703 acyl-CoA synthetase -
  I6G27_RS03625 (I6G27_03625) - 808233..809063 (-) 831 WP_167541437.1 DegV family protein -

Sequence

Protein


Download         Length: 351 a.a.        Molecular weight: 37673.19 Da        Isoelectric Point: 4.9398

>NTDB_id=513967 I6G27_RS03615 WP_062332196.1 804944..805999(-) (recA) [Moraxella osloensis strain FDAARGOS_870]
MDDNKAKALTAALSQIEKQFGKNTIMRLGDESAKINVDVVSTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQAI
AQCQKQGGTCAFIDAEHALDPIYAKKLGVDVDALLVTQPDNGEQALEIADMLVRSGAVDMIVVDSVAALTPRAEIEGEMG
DSHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGAVKEGENIVGS
ETRVKVIKNKLAPPFRQAEFDIMYGTGTNHLGEVVDLGVDIDAVKKSGAWYSYNDSKIGQGKANAIRFLEENPQIAQEIE
AKVRAAKLGNVEPVPEEALDVEPPEFVEGMQ

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=513967 I6G27_RS03615 WP_062332196.1 804944..805999(-) (recA) [Moraxella osloensis strain FDAARGOS_870]
ATGGACGACAATAAAGCCAAAGCTTTAACTGCTGCTTTATCACAAATTGAAAAACAATTTGGTAAAAATACCATCATGCG
CCTGGGTGATGAGTCAGCAAAAATCAACGTGGATGTAGTCTCCACAGGCTCATTGGGTTTGGATATCGCACTGGGTATTG
GCGGTTTGCCAAAGGGTCGTATCGTCGAAATTTATGGTCCTGAAAGTTCGGGTAAAACCACGTTAACCTTGCAAGCAATC
GCCCAATGTCAAAAGCAAGGCGGTACCTGTGCTTTTATCGATGCTGAGCATGCGCTAGACCCTATTTATGCCAAAAAATT
GGGCGTTGATGTCGATGCTTTACTTGTCACGCAGCCTGACAACGGTGAACAAGCGCTTGAAATCGCCGATATGTTAGTGC
GTTCAGGTGCGGTGGATATGATTGTTGTTGACTCGGTCGCCGCGCTTACCCCACGCGCAGAGATTGAAGGCGAGATGGGC
GACAGCCACATGGGTCTGCAAGCGCGCTTGATGAGCCAAGCGCTACGTAAAATCACCGGTAACGCCAAACGCTCCAACTG
TATGGTGATATTCATTAACCAAATTCGTATGAAGATCGGTGTCATGTTTGGCTCGCCAGAAACCACAACGGGTGGTAACG
CCCTTAAATTCTATGCGTCAGTGCGTTTGGATATTCGTCGTATTGGTGCGGTTAAAGAGGGTGAAAACATCGTCGGTTCT
GAGACCCGCGTTAAGGTAATCAAAAATAAACTGGCGCCGCCGTTTCGCCAAGCAGAATTTGACATCATGTATGGGACAGG
TACCAATCATCTAGGTGAAGTGGTTGACTTGGGTGTCGATATTGATGCGGTCAAAAAATCGGGCGCTTGGTACAGCTACA
ATGACAGTAAAATTGGTCAAGGTAAAGCCAACGCCATTAGATTCTTGGAAGAAAATCCCCAAATCGCCCAAGAGATTGAA
GCCAAAGTGCGCGCTGCTAAGCTTGGTAATGTCGAACCTGTACCAGAAGAAGCCCTTGACGTTGAACCCCCTGAGTTTGT
CGAAGGTATGCAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(7-268)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A378QBR6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Acinetobacter baylyi ADP1

83.025

92.308

0.766
  recA Acinetobacter baumannii D1279779

82.716

92.308

0.764
  recA Pseudomonas stutzeri DSM 10701

73.199

98.86

0.724
  recA Vibrio cholerae strain A1552

70.977

99.145

0.704
  recA Vibrio cholerae O1 biovar El Tor strain E7946

70.977

99.145

0.704
  recA Neisseria gonorrhoeae strain FA1090

71.077

92.593

0.658
  recA Neisseria gonorrhoeae MS11

71.077

92.593

0.658
  recA Neisseria gonorrhoeae MS11

71.077

92.593

0.658
  recA Glaesserella parasuis strain SC1401

71.118

91.738

0.652
  recA Ralstonia pseudosolanacearum GMI1000

73.463

88.034

0.647
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

66.769

92.593

0.618
  recA Helicobacter pylori strain NCTC11637

62.974

97.721

0.615
  recA Helicobacter pylori 26695

62.682

97.721

0.613
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

63.83

93.732

0.598
  recA Streptococcus pneumoniae Rx1

58.217

100

0.595
  recA Streptococcus pneumoniae TIGR4

58.217

100

0.595
  recA Streptococcus pneumoniae R6

58.217

100

0.595
  recA Streptococcus pneumoniae D39

58.217

100

0.595
  recA Bacillus subtilis subsp. subtilis str. 168

63.272

92.308

0.584
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

62.5

93.447

0.584
  recA Latilactobacillus sakei subsp. sakei 23K

60.237

96.011

0.578
  recA Streptococcus mitis NCTC 12261

61.42

92.308

0.567
  recA Streptococcus pyogenes NZ131

61.043

92.877

0.567
  recA Streptococcus mitis SK321

61.111

92.308

0.564
  recA Streptococcus mutans UA159

60.123

92.877

0.558
  recA Lactococcus lactis subsp. cremoris KW2

60.494

92.308

0.558