Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   I6G42_RS03555 Genome accession   NZ_CP065707
Coordinates   695230..696381 (+) Length   383 a.a.
NCBI ID   WP_038804174.1    Uniprot ID   A0A7T3A078
Organism   Streptococcus oralis strain FDAARGOS_885     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 690230..701381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G42_RS03530 (I6G42_03530) comM 691126..691749 (+) 624 WP_080641267.1 hypothetical protein Regulator
  I6G42_RS03535 (I6G42_03535) tsaE 691853..692296 (+) 444 WP_000288225.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  I6G42_RS03540 (I6G42_03540) - 692286..692807 (+) 522 WP_038804177.1 GNAT family N-acetyltransferase -
  I6G42_RS03545 (I6G42_03545) brpA 692812..693846 (+) 1035 WP_038804176.1 biofilm formation/cell division transcriptional regulator BrpA -
  I6G42_RS03550 (I6G42_03550) cinA 693919..695175 (+) 1257 WP_038804175.1 competence/damage-inducible protein A Machinery gene
  I6G42_RS03555 (I6G42_03555) recA 695230..696381 (+) 1152 WP_038804174.1 recombinase RecA Machinery gene
  I6G42_RS03560 (I6G42_03560) - 696438..696992 (-) 555 WP_038804172.1 GNAT family N-acetyltransferase -
  I6G42_RS03565 (I6G42_03565) - 697102..698472 (+) 1371 WP_038804171.1 MATE family efflux transporter -
  I6G42_RS03570 (I6G42_03570) - 698569..699285 (+) 717 WP_000532893.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6G42_RS03575 (I6G42_03575) - 699333..700031 (-) 699 WP_038804170.1 CD20-like domain-containing protein -
  I6G42_RS03580 (I6G42_03580) - 700224..700685 (+) 462 WP_038804169.1 MarR family winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 383 a.a.        Molecular weight: 41070.71 Da        Isoelectric Point: 4.8344

>NTDB_id=513290 I6G42_RS03555 WP_038804174.1 695230..696381(+) (recA) [Streptococcus oralis strain FDAARGOS_885]
MAKKPTKKLDEIGKKFGADREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYG
PESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVIDSV
AALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVR
GSTQIKGTGDQKDTNVGKETKIKVVKNKVAPPFKEAFVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGS
ENAKKYLADHPEVFDEIDHQVRVQYGLIEDEEGTTSTSVAEDLAPNQEVTLDLGDGLEIEIEE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=513290 I6G42_RS03555 WP_038804174.1 695230..696381(+) (recA) [Streptococcus oralis strain FDAARGOS_885]
ATGGCGAAAAAACCAACAAAAAAATTAGATGAAATTGGGAAAAAATTTGGAGCGGATCGTGAAAAAGCCTTGAACGATGC
TCTTAAACTGATTGAAAAAGACTTCGGTAAAGGCTCAATCATGCGTTTGGGCGAGCGTGCGGAGCAAAAAGTGCAAGTCA
TGAGTTCAGGCTCATTGGCTCTGGACATTGCCCTTGGTTCAGGTGGTTATCCTAAAGGACGTATCATCGAAATCTACGGA
CCAGAATCATCTGGTAAGACAACGGTTGCCCTTCACGCTGTTGCGCAAGCACAGAAAGAAGGTGGTATCGCAGCCTTTAT
CGATGCGGAACATGCCCTTGATCCAGCCTATGCAGCAGCCCTTGGTGTGAACATTGACGAATTACTCTTGTCACAACCAG
ACTCAGGAGAGCAAGGTCTTGAAATTGCTGGAAAATTGATTGACTCAGGTGCAGTTGACCTTGTCGTTATCGACTCGGTT
GCGGCCCTTGTACCTCGTGCAGAAATTGATGGGGATATTGGAGACAGTCACGTTGGTTTGCAGGCTCGTATGATGAGCCA
GGCCATGCGTAAACTCGGAGCTTCTATCAATAAAACTAAAACAATTGCCATCTTTATCAACCAATTGCGTGAAAAAGTTG
GGGTCATGTTTGGAAATCCAGAAACAACACCTGGTGGACGTGCTCTGAAATTCTATGCTTCAGTCCGTTTGGATGTTCGT
GGAAGCACACAAATCAAGGGAACTGGTGACCAAAAAGATACCAATGTCGGTAAGGAAACCAAGATCAAGGTCGTGAAAAA
CAAGGTGGCTCCACCATTTAAGGAAGCCTTTGTTGAAATCATGTACGGAGAAGGTATTTCTAAGACCGGTGAGCTCTTGA
AGATTGCAAGTGATTTGGATATCATCAAAAAAGCAGGAGCTTGGTACTCTTACAAGGATGAAAAGATCGGTCAGGGTTCT
GAAAATGCTAAGAAATACTTGGCAGATCACCCAGAAGTCTTTGATGAGATTGACCATCAAGTTCGTGTTCAATATGGCTT
GATTGAAGATGAAGAAGGGACAACTTCTACTTCTGTCGCAGAAGATCTAGCACCTAACCAAGAAGTAACACTTGACCTAG
GCGATGGACTTGAAATCGAAATTGAAGAATAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(22-287)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7T3A078

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Streptococcus mitis SK321

94.026

100

0.945
  recA Streptococcus mitis NCTC 12261

93.766

100

0.943
  recA Streptococcus pneumoniae R6

90.488

100

0.919
  recA Streptococcus pneumoniae TIGR4

90.488

100

0.919
  recA Streptococcus pneumoniae D39

90.488

100

0.919
  recA Streptococcus pneumoniae Rx1

90.488

100

0.919
  recA Streptococcus pyogenes NZ131

85

99.217

0.843
  recA Streptococcus mutans UA159

84.073

100

0.841
  recA Lactococcus lactis subsp. cremoris KW2

79.037

92.167

0.728
  recA Latilactobacillus sakei subsp. sakei 23K

69.909

85.901

0.601
  recA Bacillus subtilis subsp. subtilis str. 168

68.485

86.162

0.59
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

63.777

84.334

0.538
  recA Vibrio cholerae strain A1552

59.012

89.817

0.53
  recA Vibrio cholerae O1 biovar El Tor strain E7946

59.012

89.817

0.53
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

61.89

85.64

0.53
  recA Neisseria gonorrhoeae MS11

60.606

86.162

0.522
  recA Neisseria gonorrhoeae MS11

60.606

86.162

0.522
  recA Neisseria gonorrhoeae strain FA1090

60.606

86.162

0.522
  recA Glaesserella parasuis strain SC1401

61.61

84.334

0.52
  recA Acinetobacter baumannii D1279779

61.043

85.117

0.52
  recA Pseudomonas stutzeri DSM 10701

57.225

90.339

0.517
  recA Acinetobacter baylyi ADP1

60.429

85.117

0.514
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

57.018

89.295

0.509
  recA Ralstonia pseudosolanacearum GMI1000

58.133

86.684

0.504
  recA Helicobacter pylori 26695

57.751

85.901

0.496
  recA Helicobacter pylori strain NCTC11637

57.751

85.901

0.496