Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | IAG34_RS10280 | Genome accession | NZ_CP060994 |
| Coordinates | 2103035..2104084 (+) | Length | 349 a.a. |
| NCBI ID | WP_000344169.1 | Uniprot ID | N9L2B2 |
| Organism | Acinetobacter baumannii strain CAb-65 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2079791..2104084 | 2103035..2104084 | within | 0 |
Gene organization within MGE regions
Location: 2079791..2104084
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IAG34_RS10150 (IAG34_10150) | - | 2079791..2080722 (-) | 932 | Protein_1994 | IS5-like element ISAba13 family transposase | - |
| IAG34_RS10155 (IAG34_10155) | - | 2080841..2082712 (+) | 1872 | WP_223154132.1 | phage tail tape measure protein | - |
| IAG34_RS10160 (IAG34_10160) | - | 2082755..2083345 (+) | 591 | WP_002057872.1 | hypothetical protein | - |
| IAG34_RS10165 (IAG34_10165) | - | 2083416..2084591 (+) | 1176 | WP_002057864.1 | DNA circularization protein | - |
| IAG34_RS10170 (IAG34_10170) | - | 2084581..2085636 (+) | 1056 | WP_002057874.1 | phage baseplate assembly protein | - |
| IAG34_RS10175 (IAG34_10175) | - | 2085633..2086115 (+) | 483 | WP_000973841.1 | phage baseplate assembly protein | - |
| IAG34_RS10180 (IAG34_10180) | - | 2086123..2086485 (+) | 363 | WP_002057863.1 | phage GP46 family protein | - |
| IAG34_RS10185 (IAG34_10185) | - | 2086489..2087535 (+) | 1047 | WP_057694479.1 | baseplate J/gp47 family protein | - |
| IAG34_RS10190 (IAG34_10190) | - | 2087532..2088071 (+) | 540 | WP_086267235.1 | DUF2313 domain-containing protein | - |
| IAG34_RS10195 (IAG34_10195) | - | 2088068..2089606 (+) | 1539 | WP_002057231.1 | hypothetical protein | - |
| IAG34_RS10200 (IAG34_10200) | - | 2090213..2090676 (+) | 464 | Protein_2004 | MarR family winged helix-turn-helix transcriptional regulator | - |
| IAG34_RS10205 (IAG34_10205) | - | 2090866..2091081 (+) | 216 | WP_001129188.1 | hypothetical protein | - |
| IAG34_RS10210 (IAG34_10210) | - | 2091683..2093317 (+) | 1635 | Protein_2006 | diguanylate cyclase domain-containing protein | - |
| IAG34_RS10215 (IAG34_10215) | - | 2093352..2094098 (-) | 747 | WP_002122556.1 | IS5-like element ISAba31 family transposase | - |
| IAG34_RS10220 (IAG34_10220) | - | 2094178..2094636 (+) | 459 | Protein_2008 | EAL domain-containing protein | - |
| IAG34_RS10225 (IAG34_10225) | - | 2094762..2095205 (+) | 444 | WP_000120225.1 | universal stress protein | - |
| IAG34_RS10230 (IAG34_10230) | - | 2095260..2096702 (-) | 1443 | WP_002059515.1 | glucose/sorbosone family PQQ-dependent dehydrogenase | - |
| IAG34_RS10235 (IAG34_10235) | - | 2097055..2097684 (+) | 630 | WP_000332546.1 | SOS response-associated peptidase family protein | - |
| IAG34_RS10240 (IAG34_10240) | - | 2097931..2099172 (+) | 1242 | Protein_2012 | SulP family inorganic anion transporter | - |
| IAG34_RS10245 (IAG34_10245) | - | 2099226..2100157 (-) | 932 | Protein_2013 | IS5-like element ISAba13 family transposase | - |
| IAG34_RS10250 (IAG34_10250) | - | 2100214..2100564 (+) | 351 | Protein_2014 | GNAT family N-acetyltransferase | - |
| IAG34_RS10255 (IAG34_10255) | - | 2100616..2100909 (-) | 294 | WP_000689660.1 | hypothetical protein | - |
| IAG34_RS10260 (IAG34_10260) | - | 2101024..2101260 (-) | 237 | WP_000525041.1 | hypothetical protein | - |
| IAG34_RS10265 (IAG34_10265) | - | 2101359..2101608 (-) | 250 | Protein_2017 | YcgJ family protein | - |
| IAG34_RS10270 (IAG34_10270) | - | 2101779..2102465 (+) | 687 | WP_001045480.1 | HAD-IA family hydrolase | - |
| IAG34_RS10275 (IAG34_10275) | - | 2102449..2102889 (+) | 441 | WP_000040959.1 | RNA-binding S4 domain-containing protein | - |
| IAG34_RS10280 (IAG34_10280) | recA | 2103035..2104084 (+) | 1050 | WP_000344169.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 37891.25 Da Isoelectric Point: 4.7769
>NTDB_id=479356 IAG34_RS10280 WP_000344169.1 2103035..2104084(+) (recA) [Acinetobacter baumannii strain CAb-65]
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENTQIAEEIER
NIREQLLTTGTNGAVQIEDEEEPDLLLES
MDENKSKALQAALSQIEKQFGKNTVMRLGDNTVQAVEAVSTGSLTLDIALGIGGLPKGRIIEIYGPESSGKTTMTLQAIA
QCQKSGGTCAFIDAEHALDPQYARKLGVDIDNLLVSQPDNGEQALEIADMLVRSGAIDLIVVDSVAALTPKAEIEGEMGD
SHMGLQARLMSQALRKITGNAKRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGQVKEGDEIVGSE
TKVKVVKNKMAPPFKEAIFQILYGKGTNQLGELVDLAVQQDIVQKAGAWYSYQGNKIGQGKNNVIRYFEENTQIAEEIER
NIREQLLTTGTNGAVQIEDEEEPDLLLES
Nucleotide
Download Length: 1050 bp
>NTDB_id=479356 IAG34_RS10280 WP_000344169.1 2103035..2104084(+) (recA) [Acinetobacter baumannii strain CAb-65]
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAGCAATTTGGTAAAAATACGGTTATGCG
TCTTGGTGATAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCATTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATCGAAATTTATGGTCCTGAATCTTCTGGTAAAACCACAATGACATTGCAAGCAATTGCT
CAATGTCAAAAATCTGGTGGTACATGTGCCTTCATTGATGCTGAGCACGCCCTAGACCCTCAATATGCACGCAAACTTGG
TGTAGATATTGATAACCTACTTGTTTCACAACCCGACAATGGTGAGCAAGCACTTGAAATTGCTGACATGCTTGTCCGCT
CAGGCGCAATTGATTTAATCGTTGTGGACTCGGTGGCTGCACTTACACCTAAAGCAGAAATCGAAGGTGAGATGGGTGAC
TCTCATATGGGTCTACAAGCACGTCTTATGAGCCAGGCACTTCGTAAAATTACGGGTAATGCTAAACGTTCAAACTGTAT
GGTTATCTTCATTAACCAGATTCGTATGAAAATTGGTGTTATGTTTGGTAGCCCAGAAACTACCACTGGTGGTAACGCTC
TTAAATTCTACGCTTCAGTTCGTTTAGATATTCGTCGTATCGGTCAAGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAACAAAATGGCTCCTCCGTTTAAAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAACTAGGTGAACTTGTAGATTTAGCTGTACAACAGGATATCGTACAAAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAAAACAATGTAATTCGCTATTTTGAAGAAAATACTCAAATAGCTGAAGAAATTGAACGT
AATATCCGTGAACAATTGCTGACTACAGGCACAAATGGTGCAGTTCAAATTGAAGATGAAGAAGAGCCAGATCTTTTATT
AGAATCGTAA
ATGGATGAGAATAAAAGCAAAGCATTACAAGCCGCTTTGAGCCAAATTGAGAAGCAATTTGGTAAAAATACGGTTATGCG
TCTTGGTGATAACACTGTTCAAGCAGTTGAAGCCGTATCTACAGGTTCTTTAACTTTAGACATCGCATTGGGGATTGGTG
GTTTACCAAAAGGCCGTATTATCGAAATTTATGGTCCTGAATCTTCTGGTAAAACCACAATGACATTGCAAGCAATTGCT
CAATGTCAAAAATCTGGTGGTACATGTGCCTTCATTGATGCTGAGCACGCCCTAGACCCTCAATATGCACGCAAACTTGG
TGTAGATATTGATAACCTACTTGTTTCACAACCCGACAATGGTGAGCAAGCACTTGAAATTGCTGACATGCTTGTCCGCT
CAGGCGCAATTGATTTAATCGTTGTGGACTCGGTGGCTGCACTTACACCTAAAGCAGAAATCGAAGGTGAGATGGGTGAC
TCTCATATGGGTCTACAAGCACGTCTTATGAGCCAGGCACTTCGTAAAATTACGGGTAATGCTAAACGTTCAAACTGTAT
GGTTATCTTCATTAACCAGATTCGTATGAAAATTGGTGTTATGTTTGGTAGCCCAGAAACTACCACTGGTGGTAACGCTC
TTAAATTCTACGCTTCAGTTCGTTTAGATATTCGTCGTATCGGTCAAGTAAAAGAAGGCGATGAAATTGTTGGTTCAGAA
ACTAAAGTTAAAGTCGTTAAGAACAAAATGGCTCCTCCGTTTAAAGAAGCTATTTTCCAAATTCTATACGGTAAAGGTAC
TAACCAACTAGGTGAACTTGTAGATTTAGCTGTACAACAGGATATCGTACAAAAAGCTGGTGCATGGTATTCATATCAAG
GCAATAAAATTGGCCAAGGTAAAAACAATGTAATTCGCTATTTTGAAGAAAATACTCAAATAGCTGAAGAAATTGAACGT
AATATCCGTGAACAATTGCTGACTACAGGCACAAATGGTGCAGTTCAAATTGAAGATGAAGAAGAGCCAGATCTTTTATT
AGAATCGTAA
Similar proteins
Only experimentally validated proteins are listed.