Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HUG14_RS05560 | Genome accession | NZ_CP060580 |
| Coordinates | 1126110..1127273 (+) | Length | 387 a.a. |
| NCBI ID | WP_033900453.1 | Uniprot ID | A0A552Z4C8 |
| Organism | Lactococcus lactis strain K_LL005 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1078670..1131561 | 1126110..1127273 | within | 0 |
Gene organization within MGE regions
Location: 1078670..1131561
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUG14_RS05340 (HUG14_05340) | - | 1079417..1080085 (-) | 669 | WP_187398544.1 | hypothetical protein | - |
| HUG14_RS05345 (HUG14_05345) | - | 1080149..1080487 (+) | 339 | WP_187398545.1 | hypothetical protein | - |
| HUG14_RS05350 (HUG14_05350) | - | 1080767..1082302 (+) | 1536 | WP_262384414.1 | XRE family transcriptional regulator | - |
| HUG14_RS05355 (HUG14_05355) | - | 1082299..1082448 (+) | 150 | WP_187398546.1 | hypothetical protein | - |
| HUG14_RS05360 (HUG14_05360) | - | 1082498..1082767 (+) | 270 | WP_058210307.1 | hypothetical protein | - |
| HUG14_RS05365 (HUG14_05365) | - | 1082878..1083138 (+) | 261 | WP_187398547.1 | histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase | - |
| HUG14_RS05370 (HUG14_05370) | - | 1083256..1083609 (+) | 354 | WP_187398548.1 | helix-turn-helix domain-containing protein | - |
| HUG14_RS05375 (HUG14_05375) | - | 1083613..1084059 (+) | 447 | WP_187398549.1 | hypothetical protein | - |
| HUG14_RS05380 (HUG14_05380) | - | 1084267..1084623 (+) | 357 | WP_021723234.1 | hypothetical protein | - |
| HUG14_RS05385 (HUG14_05385) | - | 1084731..1087238 (+) | 2508 | WP_187398550.1 | SpaA isopeptide-forming pilin-related protein | - |
| HUG14_RS05390 (HUG14_05390) | - | 1087231..1087443 (+) | 213 | WP_230579318.1 | hypothetical protein | - |
| HUG14_RS05395 (HUG14_05395) | - | 1087567..1087749 (+) | 183 | WP_187398551.1 | hypothetical protein | - |
| HUG14_RS05400 (HUG14_05400) | - | 1087736..1088971 (+) | 1236 | WP_187398552.1 | translation initiation factor IF-2 N-terminal domain-containing protein | - |
| HUG14_RS05405 (HUG14_05405) | - | 1088983..1089249 (+) | 267 | WP_021723238.1 | TcpD family membrane protein | - |
| HUG14_RS05410 (HUG14_05410) | - | 1089263..1089658 (+) | 396 | WP_187398553.1 | TcpE family conjugal transfer membrane protein | - |
| HUG14_RS11635 | - | 1089655..1090080 (+) | 426 | WP_262384415.1 | hypothetical protein | - |
| HUG14_RS05415 (HUG14_05415) | - | 1090132..1092261 (+) | 2130 | WP_262384416.1 | ATP-binding protein | - |
| HUG14_RS05420 (HUG14_05420) | - | 1092261..1094366 (+) | 2106 | WP_262384417.1 | coiled-coil domain-containing protein | - |
| HUG14_RS05425 (HUG14_05425) | - | 1094376..1095416 (+) | 1041 | WP_187398554.1 | phage tail tip lysozyme | - |
| HUG14_RS05430 (HUG14_05430) | - | 1095506..1095997 (+) | 492 | WP_058210302.1 | antirestriction protein ArdA | - |
| HUG14_RS05435 (HUG14_05435) | - | 1096054..1096356 (+) | 303 | WP_128973406.1 | hypothetical protein | - |
| HUG14_RS05440 (HUG14_05440) | - | 1096418..1097560 (+) | 1143 | WP_187398555.1 | site-specific integrase | - |
| HUG14_RS05445 (HUG14_05445) | - | 1097758..1098663 (+) | 906 | WP_012897186.1 | LysR family transcriptional regulator | - |
| HUG14_RS05450 (HUG14_05450) | - | 1098721..1099902 (-) | 1182 | WP_187398556.1 | MFS transporter | - |
| HUG14_RS05455 (HUG14_05455) | - | 1099915..1100733 (-) | 819 | WP_187398557.1 | aldo/keto reductase | - |
| HUG14_RS05460 (HUG14_05460) | - | 1100875..1101222 (+) | 348 | WP_003131654.1 | helix-turn-helix domain-containing protein | - |
| HUG14_RS05465 (HUG14_05465) | - | 1101248..1101640 (+) | 393 | WP_033900433.1 | VOC family protein | - |
| HUG14_RS05470 (HUG14_05470) | - | 1101817..1102518 (+) | 702 | WP_003131652.1 | phosphoglycerate mutase | - |
| HUG14_RS05475 (HUG14_05475) | ahpC | 1102692..1103255 (+) | 564 | WP_003131651.1 | alkyl hydroperoxide reductase subunit C | - |
| HUG14_RS05480 (HUG14_05480) | ahpF | 1103322..1104851 (+) | 1530 | WP_187398573.1 | alkyl hydroperoxide reductase subunit F | - |
| HUG14_RS05485 (HUG14_05485) | - | 1105017..1107182 (+) | 2166 | WP_058206230.1 | penicillin-binding transpeptidase domain-containing protein | - |
| HUG14_RS05490 (HUG14_05490) | recR | 1107321..1107917 (+) | 597 | WP_003131648.1 | recombination mediator RecR | - |
| HUG14_RS05495 (HUG14_05495) | - | 1108034..1109083 (+) | 1050 | WP_058206231.1 | D-alanine--D-alanine ligase | - |
| HUG14_RS05500 (HUG14_05500) | murF | 1109158..1110480 (+) | 1323 | WP_143459086.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| HUG14_RS05505 (HUG14_05505) | - | 1110650..1112302 (+) | 1653 | WP_187398558.1 | peptide ABC transporter substrate-binding protein | - |
| HUG14_RS05510 (HUG14_05510) | - | 1112611..1114248 (+) | 1638 | WP_058206233.1 | peptide ABC transporter substrate-binding protein | - |
| HUG14_RS05515 (HUG14_05515) | - | 1114326..1115237 (+) | 912 | WP_003131640.1 | ABC transporter permease | - |
| HUG14_RS05520 (HUG14_05520) | - | 1115253..1116284 (+) | 1032 | WP_003131638.1 | ABC transporter permease | - |
| HUG14_RS05525 (HUG14_05525) | - | 1116287..1117336 (+) | 1050 | WP_003131637.1 | ABC transporter ATP-binding protein | - |
| HUG14_RS05530 (HUG14_05530) | - | 1117333..1118274 (+) | 942 | WP_003131636.1 | ABC transporter ATP-binding protein | - |
| HUG14_RS05535 (HUG14_05535) | - | 1118503..1120074 (+) | 1572 | WP_015425810.1 | peptide chain release factor 3 | - |
| HUG14_RS05540 (HUG14_05540) | - | 1120337..1121980 (+) | 1644 | WP_012897199.1 | DEAD/DEAH box helicase | - |
| HUG14_RS05545 (HUG14_05545) | era | 1122344..1123254 (+) | 911 | Protein_1057 | GTPase Era | - |
| HUG14_RS05550 (HUG14_05550) | asnB | 1123351..1124943 (+) | 1593 | WP_033900451.1 | asparagine synthase B | - |
| HUG14_RS05555 (HUG14_05555) | mutM | 1125138..1125956 (+) | 819 | WP_187398559.1 | DNA-formamidopyrimidine glycosylase | - |
| HUG14_RS05560 (HUG14_05560) | recA | 1126110..1127273 (+) | 1164 | WP_033900453.1 | recombinase RecA | Machinery gene |
| HUG14_RS05565 (HUG14_05565) | - | 1127286..1128659 (-) | 1374 | WP_003131627.1 | amino acid permease | - |
| HUG14_RS05570 (HUG14_05570) | - | 1128728..1130107 (-) | 1380 | WP_012897204.1 | amino acid permease | - |
| HUG14_RS05575 (HUG14_05575) | - | 1130254..1130634 (+) | 381 | WP_010905299.1 | YlbF family regulator | - |
| HUG14_RS05580 (HUG14_05580) | - | 1130621..1130935 (+) | 315 | WP_003131624.1 | YlbG family protein | - |
Sequence
Protein
Download Length: 387 a.a. Molecular weight: 41463.28 Da Isoelectric Point: 5.1619
>NTDB_id=476656 HUG14_RS05560 WP_033900453.1 1126110..1127273(+) (recA) [Lactococcus lactis strain K_LL005]
MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYG
PESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSV
AALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGA
EKAKNYLKEHQEIFDEIDHKVRAAHGLLDEAEVAETTEDTSTKSKATKAKKEEKVVETEEIELELED
MATKKKTNFDDITKKYGAERDKALADALALIEKDFGKGSLMRLGEAANQKVSVVSSGSLALDIALGAGGYPKGRIVEIYG
PESSGKTTVALHAVAAVQKEGGIAAFIDAENALDPEYAKALGVNIDELLLSQPDYGEQGLQIAEKLITSGAVDLVVIDSV
AALVPKAEIDGEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVGVMFGSPETTPGGRALKFYASVRLDVR
GSTKIEEGSGDNKTQIGKITKIKVVKNKVAPPFKVALVDIMFGEGISRTGELLNIAVDEGIIKKSGAWFAYNDEKIGQGA
EKAKNYLKEHQEIFDEIDHKVRAAHGLLDEAEVAETTEDTSTKSKATKAKKEEKVVETEEIELELED
Nucleotide
Download Length: 1164 bp
>NTDB_id=476656 HUG14_RS05560 WP_033900453.1 1126110..1127273(+) (recA) [Lactococcus lactis strain K_LL005]
TTGGCAACAAAGAAAAAAACAAATTTTGATGATATTACCAAAAAATATGGCGCTGAACGTGACAAAGCTTTGGCAGATGC
ACTTGCTCTGATTGAAAAAGACTTTGGGAAAGGTTCACTTATGCGTCTTGGCGAAGCAGCCAACCAGAAAGTGTCAGTAG
TAAGTTCAGGCTCACTTGCACTTGATATTGCGCTTGGTGCAGGTGGATATCCTAAAGGACGTATCGTTGAAATCTACGGA
CCAGAATCTTCTGGTAAAACAACAGTCGCTCTTCATGCCGTTGCAGCGGTTCAAAAAGAAGGTGGAATTGCAGCCTTTAT
CGATGCTGAAAATGCGCTTGACCCAGAATATGCAAAAGCGCTCGGTGTCAATATCGATGAACTTTTACTTTCACAACCAG
ACTATGGTGAACAAGGGCTTCAAATTGCTGAAAAATTGATTACATCTGGTGCAGTTGACTTAGTTGTTATTGACTCAGTT
GCAGCTTTGGTACCTAAAGCCGAAATTGACGGTGAAATTGGAGACAGTTCAGTTGGGCTTCAAGCTCGTATGATGTCACA
AGCCATGCGTAAACTTGCAGGACATATTAATAAAACAAAAACAACAGCTATTTTCATCAACCAATTGCGTGAAAAAGTTG
GGGTTATGTTTGGTTCGCCAGAAACAACACCTGGTGGTCGTGCATTGAAATTCTACGCTTCTGTACGTCTTGATGTACGT
GGTTCAACAAAAATCGAAGAAGGTTCTGGAGATAACAAGACCCAAATCGGTAAAATCACAAAAATCAAAGTCGTTAAAAA
CAAAGTGGCTCCACCATTCAAGGTTGCTCTCGTAGATATCATGTTTGGTGAAGGGATTTCAAGAACCGGTGAACTTTTAA
ACATTGCTGTTGATGAAGGAATCATCAAAAAATCAGGCGCTTGGTTTGCTTACAATGACGAAAAAATTGGTCAAGGAGCA
GAAAAAGCGAAGAACTATCTCAAAGAACATCAAGAAATCTTTGATGAAATTGACCATAAAGTTCGTGCCGCACACGGTCT
TCTTGATGAAGCAGAAGTAGCAGAAACTACAGAAGATACTTCAACAAAATCTAAGGCAACTAAAGCTAAAAAAGAAGAAA
AAGTAGTCGAAACTGAAGAAATTGAACTCGAACTTGAAGATTAA
TTGGCAACAAAGAAAAAAACAAATTTTGATGATATTACCAAAAAATATGGCGCTGAACGTGACAAAGCTTTGGCAGATGC
ACTTGCTCTGATTGAAAAAGACTTTGGGAAAGGTTCACTTATGCGTCTTGGCGAAGCAGCCAACCAGAAAGTGTCAGTAG
TAAGTTCAGGCTCACTTGCACTTGATATTGCGCTTGGTGCAGGTGGATATCCTAAAGGACGTATCGTTGAAATCTACGGA
CCAGAATCTTCTGGTAAAACAACAGTCGCTCTTCATGCCGTTGCAGCGGTTCAAAAAGAAGGTGGAATTGCAGCCTTTAT
CGATGCTGAAAATGCGCTTGACCCAGAATATGCAAAAGCGCTCGGTGTCAATATCGATGAACTTTTACTTTCACAACCAG
ACTATGGTGAACAAGGGCTTCAAATTGCTGAAAAATTGATTACATCTGGTGCAGTTGACTTAGTTGTTATTGACTCAGTT
GCAGCTTTGGTACCTAAAGCCGAAATTGACGGTGAAATTGGAGACAGTTCAGTTGGGCTTCAAGCTCGTATGATGTCACA
AGCCATGCGTAAACTTGCAGGACATATTAATAAAACAAAAACAACAGCTATTTTCATCAACCAATTGCGTGAAAAAGTTG
GGGTTATGTTTGGTTCGCCAGAAACAACACCTGGTGGTCGTGCATTGAAATTCTACGCTTCTGTACGTCTTGATGTACGT
GGTTCAACAAAAATCGAAGAAGGTTCTGGAGATAACAAGACCCAAATCGGTAAAATCACAAAAATCAAAGTCGTTAAAAA
CAAAGTGGCTCCACCATTCAAGGTTGCTCTCGTAGATATCATGTTTGGTGAAGGGATTTCAAGAACCGGTGAACTTTTAA
ACATTGCTGTTGATGAAGGAATCATCAAAAAATCAGGCGCTTGGTTTGCTTACAATGACGAAAAAATTGGTCAAGGAGCA
GAAAAAGCGAAGAACTATCTCAAAGAACATCAAGAAATCTTTGATGAAATTGACCATAAAGTTCGTGCCGCACACGGTCT
TCTTGATGAAGCAGAAGTAGCAGAAACTACAGAAGATACTTCAACAAAATCTAAGGCAACTAAAGCTAAAAAAGAAGAAA
AAGTAGTCGAAACTGAAGAAATTGAACTCGAACTTGAAGATTAA
Similar proteins
Only experimentally validated proteins are listed.