Detailed information    

insolico Bioinformatically predicted

Overview

Name   recA   Type   Machinery gene
Locus tag   JGUZn3_RS03350 Genome accession   NZ_CP060244
Coordinates   735443..736477 (+) Length   344 a.a.
NCBI ID   WP_203414315.1    Uniprot ID   A0A7H1NQ63
Organism   Entomobacter blattae strain G55GP     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 730443..741477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGUZn3_RS03335 (JGUZn3_06780) - 731065..732633 (+) 1569 WP_238996883.1 gamma-glutamyltransferase -
  JGUZn3_RS03340 (JGUZn3_06790) - 732855..734399 (+) 1545 WP_203414313.1 catalase -
  JGUZn3_RS03345 (JGUZn3_06800) - 734486..735169 (+) 684 WP_203414314.1 ankyrin repeat domain-containing protein -
  JGUZn3_RS03350 (JGUZn3_06810) recA 735443..736477 (+) 1035 WP_203414315.1 recombinase RecA Machinery gene
  JGUZn3_RS03355 (JGUZn3_06820) - 736532..736759 (-) 228 WP_203414316.1 hypothetical protein -
  JGUZn3_RS03360 (JGUZn3_06830) - 736845..737108 (-) 264 WP_203414317.1 hypothetical protein -
  JGUZn3_RS03365 (JGUZn3_06840) - 737178..738335 (-) 1158 WP_203414318.1 GNAT family N-acetyltransferase -
  JGUZn3_RS03370 (JGUZn3_06850) - 738449..738922 (-) 474 WP_203414319.1 RidA family protein -
  JGUZn3_RS03375 (JGUZn3_06860) - 739098..740768 (-) 1671 WP_203414320.1 vitamin B12-dependent ribonucleotide reductase -
  JGUZn3_RS03380 (JGUZn3_06870) - 741095..741472 (+) 378 WP_203414321.1 NADH-ubiquinone oxidoreductase subunit NDUFA12 family protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 37136.38 Da        Isoelectric Point: 5.3144

>NTDB_id=474718 JGUZn3_RS03350 WP_203414315.1 735443..736477(+) (recA) [Entomobacter blattae strain G55GP]
MDKSKALEGALSQIERAFGKGSIMRMGQKPNEQVEVISTGSLGLDIALGIGGLPRGRVVEIYGPESSGKTTLALHVIAEA
QKKGGTCAFIDAEHALDPIYARKLGVDVDNLLISQPDAGEQALEIADTLVRSGAVDVLVVDSVAALVPKAELDGEMGDSH
VGLHARLMSQALRKLTGTISRSNTMMIFLNQIRQKIGIMFGNPETTTGGNALKFYASVRLDIRRIGSVKDKENVVGNQTR
VKVAKNKLAPPFRQVEFDIMYGEGISKLGELIDLGVQGNIVEKSGAWFSYDSQRIGQGRENAKQFLREHPEIAQTIEQRI
REQAGVVAEAMLADPSEDSLEDAE

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=474718 JGUZn3_RS03350 WP_203414315.1 735443..736477(+) (recA) [Entomobacter blattae strain G55GP]
ATGGATAAAAGCAAAGCTTTAGAGGGGGCTCTTAGCCAGATTGAAAGAGCCTTTGGCAAAGGGTCAATTATGCGCATGGG
CCAAAAGCCCAATGAGCAGGTTGAAGTGATCTCGACGGGGTCTTTAGGGTTAGATATTGCTCTGGGGATTGGGGGGCTAC
CTCGTGGCCGGGTTGTAGAGATTTATGGCCCAGAAAGTTCGGGGAAAACCACTTTGGCCTTGCATGTGATTGCCGAAGCC
CAGAAAAAAGGTGGTACCTGTGCATTTATTGATGCCGAACACGCGCTAGACCCCATTTATGCCCGTAAGCTTGGAGTAGA
TGTTGATAACTTGCTTATCAGCCAGCCCGATGCGGGCGAGCAAGCCTTGGAGATTGCCGATACCCTTGTGCGCTCTGGTG
CGGTGGATGTATTGGTGGTCGATAGTGTCGCAGCGCTGGTTCCTAAGGCAGAACTAGATGGGGAGATGGGCGACTCCCAC
GTGGGATTGCATGCGCGTTTAATGAGCCAGGCTTTACGCAAGCTTACTGGTACGATCTCACGTTCCAACACTATGATGAT
TTTCCTTAACCAGATTCGCCAGAAAATTGGCATTATGTTTGGCAACCCTGAGACAACCACAGGGGGAAATGCCCTTAAAT
TTTATGCTTCTGTAAGGTTAGATATTCGTCGTATTGGTTCTGTTAAGGACAAAGAGAACGTTGTTGGCAATCAAACTCGC
GTTAAAGTGGCTAAAAACAAACTGGCTCCCCCTTTCCGGCAGGTTGAGTTTGATATTATGTATGGGGAAGGGATTAGTAA
ACTCGGCGAGTTGATTGATCTGGGCGTGCAAGGCAATATCGTTGAAAAATCTGGTGCATGGTTTTCTTATGATAGCCAGC
GTATTGGGCAGGGAAGAGAAAATGCAAAACAGTTTTTGCGGGAACATCCAGAAATTGCTCAGACCATAGAGCAGCGAATC
AGAGAACAAGCCGGCGTGGTAGCAGAAGCAATGCTTGCTGACCCTTCAGAGGATTCTCTGGAAGACGCCGAGTAA

Domains

Predicted by InterproScan.

recA bacterial DNA recombination protein (RecA)

(5-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H1NQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recA Pseudomonas stutzeri DSM 10701

68.222

99.709

0.68
  recA Ralstonia pseudosolanacearum GMI1000

73.163

90.988

0.666
  recA Neisseria gonorrhoeae MS11

70.245

94.767

0.666
  recA Neisseria gonorrhoeae strain FA1090

70.245

94.767

0.666
  recA Neisseria gonorrhoeae MS11

70.245

94.767

0.666
  recA Acinetobacter baylyi ADP1

70.497

93.605

0.66
  recA Glaesserella parasuis strain SC1401

66.374

99.419

0.66
  recA Acinetobacter baumannii D1279779

69.565

93.605

0.651
  recA Vibrio cholerae strain A1552

69.159

93.314

0.645
  recA Vibrio cholerae O1 biovar El Tor strain E7946

69.159

93.314

0.645
  recA Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

63.45

99.419

0.631
  recA Bacillus subtilis subsp. subtilis str. 168

66.462

94.477

0.628
  recA Helicobacter pylori 26695

65.257

96.221

0.628
  recA Helicobacter pylori strain NCTC11637

64.955

96.221

0.625
  recA Riemerella anatipestifer ATCC 11845 = DSM 15868

62.805

95.349

0.599
  recA Latilactobacillus sakei subsp. sakei 23K

62.769

94.477

0.593
  recA Streptococcus mitis NCTC 12261

59.238

99.128

0.587
  recA Streptococcus pneumoniae R6

61.212

95.93

0.587
  recA Streptococcus pneumoniae TIGR4

61.212

95.93

0.587
  recA Streptococcus pneumoniae Rx1

61.212

95.93

0.587
  recA Streptococcus pneumoniae D39

61.212

95.93

0.587
  recA Streptococcus mitis SK321

58.601

99.709

0.584
  recA Streptococcus mutans UA159

59.639

96.512

0.576
  recA Lactococcus lactis subsp. cremoris KW2

58.58

98.256

0.576
  recA Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

61.25

93.023

0.57
  recA Streptococcus pyogenes NZ131

59.451

95.349

0.567