Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | H4O16_RS26780 | Genome accession | NZ_CP059975 |
| Coordinates | 5073177..5074256 (-) | Length | 359 a.a. |
| NCBI ID | WP_021728000.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain G03 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 5066313..5107587 | 5073177..5074256 | within | 0 |
Gene organization within MGE regions
Location: 5066313..5107587
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4O16_RS26745 (H4O16_26520) | - | 5066313..5067296 (+) | 984 | WP_000944665.1 | M23 family metallopeptidase | - |
| H4O16_RS26750 (H4O16_26525) | yunB | 5067370..5068101 (-) | 732 | WP_000021802.1 | sporulation protein YunB | - |
| H4O16_RS26755 (H4O16_26530) | - | 5068156..5068458 (-) | 303 | WP_000248466.1 | YunC family protein | - |
| H4O16_RS26760 (H4O16_26535) | - | 5068524..5069939 (-) | 1416 | WP_153580208.1 | bifunctional metallophosphatase/5'-nucleotidase | - |
| H4O16_RS26765 (H4O16_26540) | - | 5070500..5071381 (-) | 882 | WP_000446736.1 | IS3 family transposase | - |
| H4O16_RS26770 (H4O16_26545) | - | 5071390..5071686 (-) | 297 | WP_000516529.1 | transposase | - |
| H4O16_RS26775 (H4O16_26550) | - | 5072258..5073091 (+) | 834 | WP_021728001.1 | hypothetical protein | - |
| H4O16_RS26780 (H4O16_26555) | recA | 5073177..5074256 (-) | 1080 | WP_021728000.1 | recombinase RecA | Machinery gene |
| H4O16_RS26785 (H4O16_26560) | - | 5074399..5074728 (+) | 330 | WP_021727999.1 | hypothetical protein | - |
| H4O16_RS26790 (H4O16_26565) | - | 5074909..5075961 (-) | 1053 | WP_042991587.1 | N-acetylmuramoyl-L-alanine amidase | - |
| H4O16_RS26795 (H4O16_26570) | - | 5075958..5076188 (-) | 231 | Protein_5210 | BhlA/UviB family holin-like peptide | - |
| H4O16_RS26800 (H4O16_26575) | - | 5076251..5077531 (-) | 1281 | WP_021728058.1 | BppU family phage baseplate upper protein | - |
| H4O16_RS26805 (H4O16_26580) | - | 5077546..5079888 (-) | 2343 | WP_021728057.1 | phage tail spike protein | - |
| H4O16_RS26810 (H4O16_26585) | - | 5079885..5080568 (-) | 684 | WP_021728056.1 | phage tail domain-containing protein | - |
| H4O16_RS26815 (H4O16_26590) | - | 5080570..5084448 (-) | 3879 | WP_042991588.1 | phage tail tape measure protein | - |
| H4O16_RS26820 (H4O16_26595) | - | 5084465..5084653 (-) | 189 | WP_006927278.1 | hypothetical protein | - |
| H4O16_RS26825 (H4O16_26600) | - | 5084692..5085078 (-) | 387 | WP_000113340.1 | hypothetical protein | - |
| H4O16_RS26830 (H4O16_26605) | - | 5085090..5085725 (-) | 636 | WP_042991589.1 | major tail protein | - |
| H4O16_RS26835 (H4O16_26610) | - | 5085737..5086114 (-) | 378 | WP_021727769.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| H4O16_RS26840 (H4O16_26615) | - | 5086114..5086443 (-) | 330 | WP_021727768.1 | hypothetical protein | - |
| H4O16_RS26845 (H4O16_26620) | - | 5086433..5086765 (-) | 333 | WP_001126094.1 | hypothetical protein | - |
| H4O16_RS26850 (H4O16_26625) | - | 5086743..5087003 (-) | 261 | WP_000343863.1 | head-tail connector protein | - |
| H4O16_RS26855 (H4O16_26630) | - | 5087005..5088333 (-) | 1329 | WP_021727767.1 | phage major capsid protein | - |
| H4O16_RS26860 (H4O16_26635) | - | 5088335..5088913 (-) | 579 | WP_001140506.1 | HK97 family phage prohead protease | - |
| H4O16_RS26865 (H4O16_26640) | - | 5088882..5090087 (-) | 1206 | WP_021727766.1 | phage portal protein | - |
| H4O16_RS26870 (H4O16_26645) | - | 5090192..5091916 (-) | 1725 | WP_021727765.1 | terminase large subunit | - |
| H4O16_RS26875 (H4O16_26650) | - | 5091913..5092347 (-) | 435 | WP_021727764.1 | P27 family phage terminase small subunit | - |
| H4O16_RS26880 (H4O16_26655) | - | 5092467..5092832 (-) | 366 | WP_021727763.1 | HNH endonuclease | - |
| H4O16_RS26885 (H4O16_26660) | - | 5092829..5093110 (-) | 282 | WP_021727762.1 | hypothetical protein | - |
| H4O16_RS26890 (H4O16_26665) | - | 5093239..5093634 (-) | 396 | WP_000460730.1 | DUF1492 domain-containing protein | - |
| H4O16_RS26895 (H4O16_26670) | - | 5093814..5094104 (-) | 291 | WP_021727761.1 | hypothetical protein | - |
| H4O16_RS26900 (H4O16_26675) | - | 5094164..5094601 (-) | 438 | WP_021727760.1 | hypothetical protein | - |
| H4O16_RS26905 (H4O16_26680) | - | 5094674..5095213 (-) | 540 | WP_021727759.1 | ERCC4 domain-containing protein | - |
| H4O16_RS26910 (H4O16_26685) | - | 5095210..5095572 (-) | 363 | WP_023901218.1 | YopX family protein | - |
| H4O16_RS26915 (H4O16_26690) | - | 5095575..5096003 (-) | 429 | WP_021727757.1 | hypothetical protein | - |
| H4O16_RS26920 (H4O16_26695) | - | 5095991..5096230 (-) | 240 | WP_021727756.1 | primase-like DNA-binding domain-containing protein | - |
| H4O16_RS26925 (H4O16_26700) | - | 5096508..5098862 (-) | 2355 | WP_021727755.1 | phage/plasmid primase, P4 family | - |
| H4O16_RS26930 (H4O16_26705) | - | 5098882..5099394 (-) | 513 | WP_021727754.1 | helix-turn-helix domain-containing protein | - |
| H4O16_RS26935 (H4O16_26710) | - | 5099467..5099925 (-) | 459 | WP_021727753.1 | DUF669 domain-containing protein | - |
| H4O16_RS26940 (H4O16_26715) | - | 5099954..5100625 (-) | 672 | WP_021727752.1 | AAA family ATPase | - |
| H4O16_RS26945 (H4O16_26720) | - | 5100631..5100822 (-) | 192 | WP_021727751.1 | hypothetical protein | - |
| H4O16_RS26950 (H4O16_26725) | - | 5100824..5101009 (-) | 186 | WP_021727750.1 | hypothetical protein | - |
| H4O16_RS26955 (H4O16_26730) | - | 5100987..5101289 (-) | 303 | WP_021727749.1 | hypothetical protein | - |
| H4O16_RS26960 (H4O16_26735) | - | 5101289..5101639 (-) | 351 | WP_021727748.1 | BC1872 family protein | - |
| H4O16_RS26965 (H4O16_26740) | - | 5101636..5101833 (-) | 198 | WP_001262629.1 | hypothetical protein | - |
| H4O16_RS26970 (H4O16_26745) | - | 5101852..5102007 (-) | 156 | WP_021727747.1 | DUF6906 family protein | - |
| H4O16_RS26975 (H4O16_26750) | - | 5102068..5102712 (-) | 645 | WP_016097904.1 | sigma-70 family RNA polymerase sigma factor | - |
| H4O16_RS26980 (H4O16_26755) | - | 5102737..5103087 (-) | 351 | WP_021727746.1 | YqaI family protein | - |
| H4O16_RS26985 (H4O16_26760) | - | 5103106..5103333 (-) | 228 | WP_021727745.1 | hypothetical protein | - |
| H4O16_RS26990 (H4O16_26765) | - | 5103334..5103561 (-) | 228 | WP_021727744.1 | hypothetical protein | - |
| H4O16_RS26995 (H4O16_26770) | - | 5103562..5103729 (-) | 168 | WP_023901215.1 | hypothetical protein | - |
| H4O16_RS27000 (H4O16_26775) | - | 5103726..5103929 (-) | 204 | WP_021727743.1 | hypothetical protein | - |
| H4O16_RS27005 (H4O16_26780) | - | 5103956..5104201 (-) | 246 | WP_021727742.1 | helix-turn-helix domain-containing protein | - |
| H4O16_RS27010 (H4O16_26785) | - | 5104366..5104992 (+) | 627 | WP_021727741.1 | LexA family protein | - |
| H4O16_RS27015 (H4O16_26790) | - | 5105080..5106123 (+) | 1044 | WP_021727740.1 | tyrosine-type recombinase/integrase | - |
| H4O16_RS27020 (H4O16_26795) | sufB | 5106190..5107587 (-) | 1398 | WP_001118827.1 | Fe-S cluster assembly protein SufB | - |
Sequence
Protein
Download Length: 359 a.a. Molecular weight: 38666.84 Da Isoelectric Point: 4.8628
>NTDB_id=473052 H4O16_RS26780 WP_021728000.1 5073177..5074256(-) (recA) [Bacillus thuringiensis strain G03]
MAATENTTKGKEKALEEALKKIVKEFGTGAIMKLGERPNQKVSVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTI
ALHAIAEAQKEGGTAAFIDAEHALDPSYAQKLGVNIDELLMSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEI
DGDMGDSHVGLQARLMGQAMRKISGAISKNGVVAIFLNQIREKVGVSFGSPETTPGGRALKFYSTIRLDVRRGEQLKGKE
SDVLGNKTKVKVVKNKVAPPFKNIDFDILYGEGISLEGELIDIGVDLDIVQKSGAWYSYQEERLGQGRDNAKQFLKENEN
ISNSVRNEIYEYYSPKEDSVVVKEGLINENEPITLKESE
MAATENTTKGKEKALEEALKKIVKEFGTGAIMKLGERPNQKVSVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTI
ALHAIAEAQKEGGTAAFIDAEHALDPSYAQKLGVNIDELLMSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEI
DGDMGDSHVGLQARLMGQAMRKISGAISKNGVVAIFLNQIREKVGVSFGSPETTPGGRALKFYSTIRLDVRRGEQLKGKE
SDVLGNKTKVKVVKNKVAPPFKNIDFDILYGEGISLEGELIDIGVDLDIVQKSGAWYSYQEERLGQGRDNAKQFLKENEN
ISNSVRNEIYEYYSPKEDSVVVKEGLINENEPITLKESE
Nucleotide
Download Length: 1080 bp
>NTDB_id=473052 H4O16_RS26780 WP_021728000.1 5073177..5074256(-) (recA) [Bacillus thuringiensis strain G03]
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATCGTAAAAGAATTTGG
TACAGGGGCTATTATGAAACTGGGTGAGCGACCTAATCAAAAAGTATCTGTCGTATCAAGTGGTTCTGTTGGATTAGATA
ATGCTTTAGGGGTTGGTGGATATCCAAAAGGACGCATTACTGAAATCTTTGGTCCTGAATCTTCAGGTAAGACAACTATA
GCATTACATGCAATTGCAGAAGCGCAAAAAGAAGGTGGAACAGCGGCATTTATTGATGCAGAGCATGCCCTTGACCCTAG
TTATGCACAGAAATTAGGTGTGAATATTGATGAACTGCTCATGTCACAACCAGATACAGGAGAGCAAGCACTAGAGATTG
CAGAAGCTCTAGTTAGAAGTGGGGCTGTAGATATCATTGTGATAGATTCTGTAGCTGCTTTAGTCCCGAAAGCGGAAATT
GATGGGGACATGGGAGATTCACATGTGGGATTGCAGGCTAGATTGATGGGGCAGGCAATGAGAAAAATATCAGGAGCAAT
ATCCAAAAATGGAGTTGTAGCAATATTTTTAAATCAAATCAGAGAAAAAGTTGGTGTTTCTTTTGGGAGTCCTGAGACAA
CACCAGGTGGTAGGGCGTTAAAATTCTATTCAACAATTCGACTAGATGTACGTAGAGGAGAACAGTTGAAAGGAAAAGAG
AGTGACGTTTTAGGGAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTAAAAACATTGACTTTGA
CATCTTATACGGAGAAGGAATCTCCTTAGAGGGAGAGCTTATTGATATTGGTGTAGATTTAGATATTGTTCAGAAAAGTG
GGGCATGGTACTCGTATCAAGAAGAACGTCTTGGACAGGGTAGAGACAATGCCAAACAATTTCTGAAAGAGAATGAAAAC
ATAAGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGATTCTGTTGTTGTGAAAGAGGGGCTTAT
AAATGAAAATGAGCCCATTACTTTAAAAGAGTCGGAATAA
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATCGTAAAAGAATTTGG
TACAGGGGCTATTATGAAACTGGGTGAGCGACCTAATCAAAAAGTATCTGTCGTATCAAGTGGTTCTGTTGGATTAGATA
ATGCTTTAGGGGTTGGTGGATATCCAAAAGGACGCATTACTGAAATCTTTGGTCCTGAATCTTCAGGTAAGACAACTATA
GCATTACATGCAATTGCAGAAGCGCAAAAAGAAGGTGGAACAGCGGCATTTATTGATGCAGAGCATGCCCTTGACCCTAG
TTATGCACAGAAATTAGGTGTGAATATTGATGAACTGCTCATGTCACAACCAGATACAGGAGAGCAAGCACTAGAGATTG
CAGAAGCTCTAGTTAGAAGTGGGGCTGTAGATATCATTGTGATAGATTCTGTAGCTGCTTTAGTCCCGAAAGCGGAAATT
GATGGGGACATGGGAGATTCACATGTGGGATTGCAGGCTAGATTGATGGGGCAGGCAATGAGAAAAATATCAGGAGCAAT
ATCCAAAAATGGAGTTGTAGCAATATTTTTAAATCAAATCAGAGAAAAAGTTGGTGTTTCTTTTGGGAGTCCTGAGACAA
CACCAGGTGGTAGGGCGTTAAAATTCTATTCAACAATTCGACTAGATGTACGTAGAGGAGAACAGTTGAAAGGAAAAGAG
AGTGACGTTTTAGGGAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTAAAAACATTGACTTTGA
CATCTTATACGGAGAAGGAATCTCCTTAGAGGGAGAGCTTATTGATATTGGTGTAGATTTAGATATTGTTCAGAAAAGTG
GGGCATGGTACTCGTATCAAGAAGAACGTCTTGGACAGGGTAGAGACAATGCCAAACAATTTCTGAAAGAGAATGAAAAC
ATAAGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGATTCTGTTGTTGTGAAAGAGGGGCTTAT
AAATGAAAATGAGCCCATTACTTTAAAAGAGTCGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.