Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | H0H12_RS05810 | Genome accession | NZ_CP059052 |
| Coordinates | 1305793..1306860 (+) | Length | 355 a.a. |
| NCBI ID | WP_003252365.1 | Uniprot ID | I7B6K4 |
| Organism | Pseudomonas putida strain BS3701 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1300793..1311860
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H0H12_RS05785 (H0H12_05785) | - | 1301636..1301896 (+) | 261 | WP_010954796.1 | IS66 family transposase | - |
| H0H12_RS05790 (H0H12_05790) | - | 1301941..1302420 (+) | 480 | Protein_1153 | DNA adenine methylase | - |
| H0H12_RS05795 (H0H12_05795) | - | 1302717..1303511 (-) | 795 | WP_180689372.1 | hypothetical protein | - |
| H0H12_RS05800 (H0H12_05800) | - | 1304083..1305150 (+) | 1068 | WP_180689373.1 | hypothetical protein | - |
| H0H12_RS05805 (H0H12_05805) | - | 1305207..1305689 (+) | 483 | WP_180689374.1 | CinA family protein | - |
| H0H12_RS05810 (H0H12_05810) | recA | 1305793..1306860 (+) | 1068 | WP_003252365.1 | recombinase RecA | Machinery gene |
| H0H12_RS05815 (H0H12_05815) | recX | 1306882..1307352 (+) | 471 | WP_003252366.1 | recombination regulator RecX | - |
| H0H12_RS05820 (H0H12_05820) | - | 1307619..1308737 (-) | 1119 | WP_003252368.1 | LOG family protein | - |
| H0H12_RS05825 (H0H12_05825) | - | 1308898..1309107 (+) | 210 | WP_003252370.1 | hypothetical protein | - |
| H0H12_RS05830 (H0H12_05830) | - | 1309122..1309541 (-) | 420 | WP_003252372.1 | quorum-sensing-regulated virulence factor family protein | - |
| H0H12_RS05835 (H0H12_05835) | - | 1309758..1310468 (+) | 711 | WP_004574842.1 | tRNA-uridine aminocarboxypropyltransferase | - |
| H0H12_RS05840 (H0H12_05840) | erdR | 1310648..1311298 (+) | 651 | WP_003252375.1 | response regulator transcription factor ErdR | - |
| H0H12_RS05845 (H0H12_05845) | - | 1311372..1311737 (+) | 366 | WP_003252377.1 | diacylglycerol kinase | - |
Sequence
Protein
Download Length: 355 a.a. Molecular weight: 37544.89 Da Isoelectric Point: 5.3228
>NTDB_id=466851 H0H12_RS05810 WP_003252365.1 1305793..1306860(+) (recA) [Pseudomonas putida strain BS3701]
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERQGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIA
EAQKNGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGD
MHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE
TRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLAENPAIGAEIEK
QIREKLLKAGAAAEAGKAAAAEADADDMADADAGY
Nucleotide
Download Length: 1068 bp
>NTDB_id=466851 H0H12_RS05810 WP_003252365.1 1305793..1306860(+) (recA) [Pseudomonas putida strain BS3701]
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGCCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAGAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGGCTGATGTCCCAGGCGCTGCGCAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCTTGGTCGAGAAGTCCGGTGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCGGCTGCCGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
ATGGACGACAACAAGAAGCGCGCCTTGGCTGCGGCCCTGGGTCAGATCGAACGCCAATTCGGTAAAGGCGCGGTCATGCG
CATGGGTGACCATGAGCGTCAAGGCATTCCGGCCATCTCCACCGGCTCGCTGGGCCTGGATATCGCCCTGGGCATCGGCG
GTCTGCCAAAAGGCCGTATCGTCGAGATCTACGGCCCGGAATCGTCGGGTAAGACCACGCTGACCCTGTCTGTCATCGCT
GAAGCGCAGAAGAACGGTGCTACCTGCGCCTTCGTCGACGCCGAACATGCCCTTGACCCTGAGTACGCCGGCAAGCTGGG
CGTCAACGTCGATGACCTGCTGGTTTCGCAGCCGGACACCGGTGAGCAGGCCCTTGAAATCACCGACATGCTGGTGCGTT
CCAACGCGGTCGACGTGATCATTGTCGACTCCGTTGCCGCGCTGGTACCGAAGGCCGAGATCGAAGGCGAGATGGGTGAC
ATGCATGTGGGCCTGCAGGCCCGGCTGATGTCCCAGGCGCTGCGCAAGATCACCGGTAACATCAAGAACGCGAACTGCCT
GGTCATCTTCATCAACCAGATCCGTATGAAGATCGGTGTGATGTTCGGCAGCCCGGAAACCACTACCGGTGGTAACGCCC
TGAAGTTCTATGCTTCGGTCCGTCTGGACATCCGCCGTACCGGCGCGGTCAAGGAAGGCGACGAAGTGGTCGGCAGCGAA
ACCCGCGTCAAGATCGTCAAGAACAAGGTCTCGCCTCCGTTCCGTCAGGCTGAGTTCCAGATTCTTTACGGGAAAGGTAT
CTACCGTAACGGCGAGATCATTGATCTGGGGGTATCTCAGGGCTTGGTCGAGAAGTCCGGTGCCTGGTACGCCTACCAAG
GCAACAAGATCGGTCAAGGCAAAGCCAACGCTGCCAAGTACCTGGCTGAGAACCCGGCTATTGGTGCCGAGATCGAGAAG
CAGATTCGTGAGAAGTTGCTGAAAGCGGGTGCTGCTGCTGAAGCCGGCAAAGCTGCGGCTGCCGAAGCTGATGCCGATGA
CATGGCCGACGCTGACGCCGGTTATTGA
Similar proteins
Only experimentally validated proteins are listed.