Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HV088_RS18045 | Genome accession | NZ_CP058146 |
| Coordinates | 3747157..3748215 (-) | Length | 352 a.a. |
| NCBI ID | WP_022649140.1 | Uniprot ID | A0A330DB80 |
| Organism | Enterobacter hormaechei strain RHBSTW-00133 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 3719417..3748215 | 3747157..3748215 | within | 0 |
Gene organization within MGE regions
Location: 3719417..3748215
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV088_RS17875 (HV088_17880) | - | 3719417..3720022 (-) | 606 | WP_045622877.1 | ankyrin repeat domain-containing protein | - |
| HV088_RS17880 (HV088_17885) | - | 3720343..3721272 (+) | 930 | WP_022649124.1 | LysR substrate-binding domain-containing protein | - |
| HV088_RS17885 (HV088_17890) | - | 3721269..3721427 (-) | 159 | WP_003862203.1 | YqaE/Pmp3 family membrane protein | - |
| HV088_RS17890 (HV088_17895) | - | 3721607..3722125 (+) | 519 | WP_022649125.1 | rhodanese family protein | - |
| HV088_RS17895 (HV088_17900) | - | 3722208..3722387 (+) | 180 | WP_006811690.1 | hypothetical protein | - |
| HV088_RS17900 (HV088_17905) | stpA | 3722425..3722829 (-) | 405 | WP_022649126.1 | DNA-binding protein StpA | - |
| HV088_RS17905 (HV088_17910) | alaE | 3723327..3723776 (+) | 450 | WP_022649127.1 | L-alanine exporter AlaE | - |
| HV088_RS17910 (HV088_17915) | - | 3723809..3724153 (-) | 345 | WP_006811693.1 | DUF2002 family protein | - |
| HV088_RS17915 (HV088_17920) | - | 3724312..3724638 (+) | 327 | WP_017382769.1 | DUF883 domain-containing protein | - |
| HV088_RS17920 (HV088_17925) | nrdH | 3724882..3725121 (+) | 240 | WP_017382770.1 | glutaredoxin-like protein NrdH | - |
| HV088_RS17925 (HV088_17930) | nrdI | 3725118..3725528 (+) | 411 | WP_022649128.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| HV088_RS17930 (HV088_17935) | nrdE | 3725501..3727645 (+) | 2145 | WP_045622875.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| HV088_RS17935 (HV088_17940) | nrdF | 3727655..3728614 (+) | 960 | WP_022649130.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| HV088_RS17940 (HV088_17945) | proV | 3728948..3730150 (+) | 1203 | WP_023298446.1 | glycine betaine/L-proline ABC transporter ATP-binding protein ProV | - |
| HV088_RS17945 (HV088_17950) | proW | 3730143..3731207 (+) | 1065 | WP_022649132.1 | glycine betaine/L-proline ABC transporter permease ProW | - |
| HV088_RS17950 (HV088_17955) | proX | 3731217..3732212 (+) | 996 | WP_017382774.1 | glycine betaine/L-proline ABC transporter substrate-binding protein ProX | - |
| HV088_RS17955 (HV088_17960) | - | 3732422..3733606 (+) | 1185 | WP_045622873.1 | MFS transporter | - |
| HV088_RS17960 (HV088_17965) | emrR | 3733921..3734451 (+) | 531 | WP_017694792.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| HV088_RS17965 (HV088_17970) | emrA | 3734580..3735752 (+) | 1173 | WP_022649133.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| HV088_RS17970 (HV088_17975) | emrB | 3735769..3737316 (+) | 1548 | WP_022649134.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| HV088_RS24755 | - | 3737546..3737689 (+) | 144 | Protein_3532 | hypothetical protein | - |
| HV088_RS17980 (HV088_17985) | - | 3737806..3738963 (+) | 1158 | WP_045623683.1 | DDE-type integrase/transposase/recombinase | - |
| HV088_RS17985 (HV088_17990) | luxS | 3739049..3739564 (-) | 516 | WP_003862180.1 | S-ribosylhomocysteine lyase | - |
| HV088_RS17990 (HV088_17995) | gshA | 3739717..3741261 (-) | 1545 | WP_045623687.1 | glutamate--cysteine ligase | - |
| HV088_RS17995 (HV088_18000) | - | 3741345..3741773 (-) | 429 | WP_045623688.1 | YqaA family protein | - |
| HV088_RS18000 (HV088_18005) | yqaB | 3741770..3742336 (-) | 567 | WP_022649138.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| HV088_RS18030 (HV088_18035) | csrA | 3743402..3743587 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
| HV088_RS18035 (HV088_18040) | alaS | 3743829..3746456 (-) | 2628 | WP_032676479.1 | alanine--tRNA ligase | - |
| HV088_RS18040 (HV088_18045) | recX | 3746588..3747088 (-) | 501 | WP_017382782.1 | recombination regulator RecX | - |
| HV088_RS18045 (HV088_18050) | recA | 3747157..3748215 (-) | 1059 | WP_022649140.1 | recombinase RecA | Machinery gene |
Sequence
Protein
Download Length: 352 a.a. Molecular weight: 37777.21 Da Isoelectric Point: 4.8095
>NTDB_id=462319 HV088_RS18045 WP_022649140.1 3747157..3748215(-) (recA) [Enterobacter hormaechei strain RHBSTW-00133]
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQV
VAAAQREGKTCAFIDAEHALDPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEI
GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVG
SETRVKVVKNKIAAPFKQAEFQILYGEGINFLGELVDLGVKEKLIEKAGAWYSYNGDKIGQGKANAISWLKENPAAAKEI
EKKVRELLLSNQDSKPDFVVDGADAEETNEDF
Nucleotide
Download Length: 1059 bp
>NTDB_id=462319 HV088_RS18045 WP_022649140.1 3747157..3748215(-) (recA) [Enterobacter hormaechei strain RHBSTW-00133]
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGACGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCACAGCCGGACACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCGGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
ATGGCTATCGACGAAAACAAACAGAAAGCGTTGGCGGCAGCACTGGGCCAGATCGAAAAGCAATTCGGTAAAGGCTCCAT
CATGCGCCTGGGTGAAGACCGTTCCATGGACGTGGAAACTATCTCCACTGGTTCGCTTTCTCTTGATATCGCACTGGGCG
CTGGCGGTTTGCCGATGGGCCGTATCGTAGAAATCTACGGTCCGGAATCCTCGGGTAAAACCACCCTGACGTTGCAGGTT
GTTGCGGCGGCACAGCGCGAAGGTAAAACCTGTGCGTTTATCGATGCCGAGCACGCGCTGGACCCGGTCTATGCCCGTAA
ACTGGGCGTTGATATCGACAACCTGCTGTGCTCACAGCCGGACACCGGCGAGCAGGCCCTGGAAATTTGTGACGCGCTGG
CGCGCTCAGGTGCGGTTGACGTGATCATCGTCGACTCCGTTGCGGCGCTGACGCCAAAAGCGGAAATTGAAGGTGAAATC
GGTGACTCTCACATGGGCCTCGCGGCACGTATGATGAGCCAGGCGATGCGTAAGCTGGCGGGTAACCTGAAGCAGTCCAA
TACGCTGCTGATCTTCATCAACCAGATCCGTATGAAAATTGGTGTAATGTTCGGTAACCCGGAAACCACCACCGGCGGTA
ACGCTCTGAAATTCTACGCTTCTGTCCGTCTGGATATCCGCCGTATCGGCGCGGTGAAAGAGGGGGATAACGTCGTCGGT
AGCGAAACCCGCGTGAAGGTTGTGAAGAACAAAATCGCAGCACCGTTCAAACAGGCTGAATTCCAGATCCTCTACGGCGA
AGGTATCAACTTCCTCGGCGAGCTGGTTGACCTGGGCGTGAAAGAGAAGCTGATTGAAAAAGCGGGCGCATGGTACAGCT
ACAACGGTGACAAGATTGGTCAGGGTAAAGCGAATGCTATCTCCTGGCTGAAAGAGAACCCGGCGGCGGCGAAAGAGATT
GAGAAGAAGGTGCGTGAACTCCTGCTGAGCAACCAGGACTCTAAACCTGATTTCGTGGTCGACGGCGCGGATGCTGAAGA
AACCAACGAAGACTTTTAA
Similar proteins
Only experimentally validated proteins are listed.