Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HUE40_RS10825 | Genome accession | NZ_CP054507 |
| Coordinates | 2384157..2385161 (-) | Length | 334 a.a. |
| NCBI ID | WP_014166107.1 | Uniprot ID | G8X517 |
| Organism | Flavobacterium columnare strain F9S17 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 2379157..2390161
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUE40_RS10800 (HUE40_10800) | - | 2379526..2380446 (+) | 921 | WP_014166102.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| HUE40_RS10805 (HUE40_10805) | aqpZ | 2380689..2381366 (+) | 678 | WP_138425546.1 | aquaporin Z | - |
| HUE40_RS10810 (HUE40_10810) | - | 2381694..2382674 (+) | 981 | WP_225556538.1 | porin | - |
| HUE40_RS10815 (HUE40_10815) | bioB | 2382781..2383863 (+) | 1083 | WP_138425548.1 | biotin synthase BioB | - |
| HUE40_RS10820 (HUE40_10820) | - | 2383880..2384098 (-) | 219 | WP_014166106.1 | hypothetical protein | - |
| HUE40_RS10825 (HUE40_10825) | recA | 2384157..2385161 (-) | 1005 | WP_014166107.1 | recombinase RecA | Machinery gene |
| HUE40_RS10830 (HUE40_10830) | - | 2385189..2385578 (-) | 390 | WP_014166108.1 | HIT family protein | - |
| HUE40_RS10835 (HUE40_10835) | greA | 2385595..2386071 (-) | 477 | WP_014166109.1 | transcription elongation factor GreA | - |
| HUE40_RS10840 (HUE40_10840) | - | 2386228..2386653 (+) | 426 | WP_138425549.1 | hypothetical protein | - |
| HUE40_RS10845 (HUE40_10845) | - | 2386846..2388003 (+) | 1158 | WP_138425550.1 | homogentisate 1,2-dioxygenase | - |
| HUE40_RS10850 (HUE40_10850) | hppD | 2388113..2389276 (+) | 1164 | WP_014166112.1 | 4-hydroxyphenylpyruvate dioxygenase | - |
| HUE40_RS10855 (HUE40_10855) | - | 2389356..2390060 (-) | 705 | WP_138425551.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36188.57 Da Isoelectric Point: 5.3576
>NTDB_id=453058 HUE40_RS10825 WP_014166107.1 2384157..2385161(-) (recA) [Flavobacterium columnare strain F9S17]
MSSEKEAKLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIFGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQALEIAESLIRSGAVDIVVIDSVAALTPKSEIEGD
MGDSKMGLHARLMSQALRKLTATISKTNCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKDGENVL
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRDSVKSLIKDNPELAEE
LEIKIKELIKNLEN
MSSEKEAKLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIFGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQALEIAESLIRSGAVDIVVIDSVAALTPKSEIEGD
MGDSKMGLHARLMSQALRKLTATISKTNCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKDGENVL
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRDSVKSLIKDNPELAEE
LEIKIKELIKNLEN
Nucleotide
Download Length: 1005 bp
>NTDB_id=453058 HUE40_RS10825 WP_014166107.1 2384157..2385161(-) (recA) [Flavobacterium columnare strain F9S17]
ATGAGTTCAGAAAAAGAGGCTAAACTAAAAGCACTACAGCTTACTTTAGATAAGTTAGATAAAGCATACGGTAAAGGCAC
CGTGATGAAAATGGGAGACAAAGCAATAGAAGAAGTAGAAGTTATTTCTTCGGGGTCTCTTGGAGTAGATCTTGCATTAG
GTGTTGGCGGCTATCCTAAAGGTCGTATTATAGAAATATTTGGACCTGAATCATCAGGTAAGACAACACTTACATTACAT
GCGATTGCTGAGGCTCAAAAAGCAGGAGGAATTGCTGCTTTTATAGATGCTGAACACGCATTTGATCGTTTTTATGCAGA
AAAATTAGGAATAGACATTGACAACCTTATTATTTCACAACCTGACAATGGAGAACAAGCCTTAGAAATTGCTGAAAGTT
TAATTCGATCTGGAGCTGTAGATATTGTGGTTATAGACTCTGTTGCCGCACTTACTCCAAAGAGTGAAATTGAAGGCGAT
ATGGGCGATTCTAAGATGGGATTACACGCTCGTTTGATGTCACAAGCCCTACGTAAATTAACAGCAACTATTAGCAAAAC
GAATTGTACTGTATTTTTCATTAATCAGCTTCGCGATAAAATAGGTGTAATGTTTGGAAATCCTGAAACGACAACTGGAG
GTAATGCCCTTAAATTTTACGCATCGGTACGTTTAGATATTCGTCGTTCTTCACAAATTAAAGATGGTGAAAATGTATTA
GGCAATCGCACCAAAGTTAAAATTGTTAAGAATAAAGTAGCACCTCCTTTTAAAACAGCAGAATTTGACATTATGTATGG
CGAAGGTGTTTCTAAAACAGGAGAAATATTAGACCTAGCAGTTGAGTTTGAAGTTATCAAAAAGTCGGGATCATGGTTTA
GCTACGGAGAAACAAAACTCGGTCAAGGCCGTGACTCCGTTAAATCTTTAATAAAAGACAATCCTGAATTAGCAGAAGAG
CTAGAAATCAAAATCAAGGAATTAATTAAAAATTTAGAGAATTAG
ATGAGTTCAGAAAAAGAGGCTAAACTAAAAGCACTACAGCTTACTTTAGATAAGTTAGATAAAGCATACGGTAAAGGCAC
CGTGATGAAAATGGGAGACAAAGCAATAGAAGAAGTAGAAGTTATTTCTTCGGGGTCTCTTGGAGTAGATCTTGCATTAG
GTGTTGGCGGCTATCCTAAAGGTCGTATTATAGAAATATTTGGACCTGAATCATCAGGTAAGACAACACTTACATTACAT
GCGATTGCTGAGGCTCAAAAAGCAGGAGGAATTGCTGCTTTTATAGATGCTGAACACGCATTTGATCGTTTTTATGCAGA
AAAATTAGGAATAGACATTGACAACCTTATTATTTCACAACCTGACAATGGAGAACAAGCCTTAGAAATTGCTGAAAGTT
TAATTCGATCTGGAGCTGTAGATATTGTGGTTATAGACTCTGTTGCCGCACTTACTCCAAAGAGTGAAATTGAAGGCGAT
ATGGGCGATTCTAAGATGGGATTACACGCTCGTTTGATGTCACAAGCCCTACGTAAATTAACAGCAACTATTAGCAAAAC
GAATTGTACTGTATTTTTCATTAATCAGCTTCGCGATAAAATAGGTGTAATGTTTGGAAATCCTGAAACGACAACTGGAG
GTAATGCCCTTAAATTTTACGCATCGGTACGTTTAGATATTCGTCGTTCTTCACAAATTAAAGATGGTGAAAATGTATTA
GGCAATCGCACCAAAGTTAAAATTGTTAAGAATAAAGTAGCACCTCCTTTTAAAACAGCAGAATTTGACATTATGTATGG
CGAAGGTGTTTCTAAAACAGGAGAAATATTAGACCTAGCAGTTGAGTTTGAAGTTATCAAAAAGTCGGGATCATGGTTTA
GCTACGGAGAAACAAAACTCGGTCAAGGCCGTGACTCCGTTAAATCTTTAATAAAAGACAATCCTGAATTAGCAGAAGAG
CTAGAAATCAAAATCAAGGAATTAATTAAAAATTTAGAGAATTAG
Similar proteins
Only experimentally validated proteins are listed.