Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | HUE43_RS06005 | Genome accession | NZ_CP054504 |
| Coordinates | 1359875..1360879 (+) | Length | 334 a.a. |
| NCBI ID | WP_014166107.1 | Uniprot ID | G8X517 |
| Organism | Flavobacterium columnare strain F2R62 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1354875..1365879
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HUE43_RS05975 (HUE43_05975) | - | 1354975..1355679 (+) | 705 | WP_014166113.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| HUE43_RS05980 (HUE43_05980) | hppD | 1355760..1356923 (-) | 1164 | WP_014166112.1 | 4-hydroxyphenylpyruvate dioxygenase | - |
| HUE43_RS05985 (HUE43_05985) | - | 1357033..1358190 (-) | 1158 | WP_014166111.1 | homogentisate 1,2-dioxygenase | - |
| HUE43_RS05990 (HUE43_05990) | - | 1358383..1358808 (-) | 426 | WP_014166110.1 | hypothetical protein | - |
| HUE43_RS05995 (HUE43_05995) | greA | 1358965..1359441 (+) | 477 | WP_014166109.1 | transcription elongation factor GreA | - |
| HUE43_RS06000 (HUE43_06000) | - | 1359458..1359847 (+) | 390 | WP_014166108.1 | HIT family protein | - |
| HUE43_RS06005 (HUE43_06005) | recA | 1359875..1360879 (+) | 1005 | WP_014166107.1 | recombinase RecA | Machinery gene |
| HUE43_RS06010 (HUE43_06010) | bioB | 1361176..1362258 (-) | 1083 | WP_014166105.1 | biotin synthase BioB | - |
| HUE43_RS06015 (HUE43_06015) | - | 1362365..1363345 (-) | 981 | WP_196771913.1 | porin | - |
| HUE43_RS06020 (HUE43_06020) | aqpZ | 1363673..1364350 (-) | 678 | WP_014166103.1 | aquaporin Z | - |
| HUE43_RS06025 (HUE43_06025) | - | 1364593..1365513 (-) | 921 | WP_014166102.1 | bifunctional riboflavin kinase/FAD synthetase | - |
Sequence
Protein
Download Length: 334 a.a. Molecular weight: 36188.57 Da Isoelectric Point: 5.3576
>NTDB_id=453022 HUE43_RS06005 WP_014166107.1 1359875..1360879(+) (recA) [Flavobacterium columnare strain F2R62]
MSSEKEAKLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIFGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQALEIAESLIRSGAVDIVVIDSVAALTPKSEIEGD
MGDSKMGLHARLMSQALRKLTATISKTNCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKDGENVL
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRDSVKSLIKDNPELAEE
LEIKIKELIKNLEN
MSSEKEAKLKALQLTLDKLDKAYGKGTVMKMGDKAIEEVEVISSGSLGVDLALGVGGYPKGRIIEIFGPESSGKTTLTLH
AIAEAQKAGGIAAFIDAEHAFDRFYAEKLGIDIDNLIISQPDNGEQALEIAESLIRSGAVDIVVIDSVAALTPKSEIEGD
MGDSKMGLHARLMSQALRKLTATISKTNCTVFFINQLRDKIGVMFGNPETTTGGNALKFYASVRLDIRRSSQIKDGENVL
GNRTKVKIVKNKVAPPFKTAEFDIMYGEGVSKTGEILDLAVEFEVIKKSGSWFSYGETKLGQGRDSVKSLIKDNPELAEE
LEIKIKELIKNLEN
Nucleotide
Download Length: 1005 bp
>NTDB_id=453022 HUE43_RS06005 WP_014166107.1 1359875..1360879(+) (recA) [Flavobacterium columnare strain F2R62]
ATGAGTTCAGAAAAAGAGGCTAAACTAAAAGCACTACAGCTTACTTTAGATAAGTTAGATAAAGCATACGGTAAAGGCAC
CGTGATGAAAATGGGAGACAAAGCAATAGAAGAAGTAGAAGTTATTTCTTCGGGGTCTCTTGGAGTAGATCTTGCATTAG
GTGTTGGCGGCTATCCTAAAGGTCGTATTATAGAAATATTTGGACCTGAATCATCAGGTAAGACAACACTTACATTACAT
GCGATTGCTGAGGCTCAAAAAGCAGGAGGAATTGCTGCTTTTATAGATGCTGAACACGCATTTGATCGTTTTTATGCAGA
AAAATTAGGAATAGACATTGACAACCTTATTATTTCACAACCTGACAATGGAGAACAAGCCTTAGAAATTGCTGAAAGTT
TAATTCGATCTGGAGCTGTAGATATTGTGGTTATAGACTCTGTTGCCGCACTTACTCCAAAGAGTGAAATTGAAGGCGAT
ATGGGCGATTCTAAGATGGGATTACACGCTCGTTTGATGTCACAAGCCCTACGTAAATTAACAGCAACTATTAGCAAAAC
GAATTGTACTGTATTTTTCATTAATCAGCTTCGCGATAAAATAGGTGTAATGTTTGGAAATCCTGAAACGACAACTGGAG
GTAATGCCCTTAAATTTTACGCATCGGTACGTTTAGATATTCGTCGTTCTTCACAAATTAAAGATGGTGAAAATGTATTA
GGCAATCGCACCAAAGTTAAAATTGTTAAGAATAAAGTAGCACCTCCTTTTAAAACAGCAGAATTTGACATTATGTATGG
CGAAGGTGTTTCTAAAACAGGAGAAATATTAGACCTAGCAGTTGAGTTTGAAGTTATCAAAAAGTCGGGATCATGGTTTA
GCTACGGAGAAACAAAACTCGGTCAAGGCCGTGACTCCGTTAAATCTTTAATAAAAGACAATCCTGAATTAGCAGAAGAG
CTAGAAATCAAAATCAAGGAATTAATTAAAAATTTAGAGAATTAG
ATGAGTTCAGAAAAAGAGGCTAAACTAAAAGCACTACAGCTTACTTTAGATAAGTTAGATAAAGCATACGGTAAAGGCAC
CGTGATGAAAATGGGAGACAAAGCAATAGAAGAAGTAGAAGTTATTTCTTCGGGGTCTCTTGGAGTAGATCTTGCATTAG
GTGTTGGCGGCTATCCTAAAGGTCGTATTATAGAAATATTTGGACCTGAATCATCAGGTAAGACAACACTTACATTACAT
GCGATTGCTGAGGCTCAAAAAGCAGGAGGAATTGCTGCTTTTATAGATGCTGAACACGCATTTGATCGTTTTTATGCAGA
AAAATTAGGAATAGACATTGACAACCTTATTATTTCACAACCTGACAATGGAGAACAAGCCTTAGAAATTGCTGAAAGTT
TAATTCGATCTGGAGCTGTAGATATTGTGGTTATAGACTCTGTTGCCGCACTTACTCCAAAGAGTGAAATTGAAGGCGAT
ATGGGCGATTCTAAGATGGGATTACACGCTCGTTTGATGTCACAAGCCCTACGTAAATTAACAGCAACTATTAGCAAAAC
GAATTGTACTGTATTTTTCATTAATCAGCTTCGCGATAAAATAGGTGTAATGTTTGGAAATCCTGAAACGACAACTGGAG
GTAATGCCCTTAAATTTTACGCATCGGTACGTTTAGATATTCGTCGTTCTTCACAAATTAAAGATGGTGAAAATGTATTA
GGCAATCGCACCAAAGTTAAAATTGTTAAGAATAAAGTAGCACCTCCTTTTAAAACAGCAGAATTTGACATTATGTATGG
CGAAGGTGTTTCTAAAACAGGAGAAATATTAGACCTAGCAGTTGAGTTTGAAGTTATCAAAAAGTCGGGATCATGGTTTA
GCTACGGAGAAACAAAACTCGGTCAAGGCCGTGACTCCGTTAAATCTTTAATAAAAGACAATCCTGAATTAGCAGAAGAG
CTAGAAATCAAAATCAAGGAATTAATTAAAAATTTAGAGAATTAG
Similar proteins
Only experimentally validated proteins are listed.